RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 PHLDB2Q86SQ0 1253 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 BAIAP2L1Q9UHR4 511 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 ARID4AP29374 1257 aaPredicted RBP15.28■□□□□ 0.04
CLCN6-201ENST00000312413 MAGEA1P43355 309 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 FAM212AQ96EL1 285 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 TSKSQ9UJT2 592 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 NFE2L3Q9Y4A8 694 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 E7EVH7 732 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 IDI1Q13907 227 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 BRD3Q15059 726 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 NBPF5PQ86XG9 351 aaPredicted RBP15.28■□□□□ 0.04
CLCN6-201ENST00000312413 FAM204AQ9H8W3 233 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 MCM9Q9NXL9 1143 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 CEP104O60308 925 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 TFCP2Q12800 502 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 CFAP221Q4G0U5 840 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 AKNAD1Q5T1N1 836 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 FAM173BQ6P4H8 233 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 MAGEB6Q8N7X4 407 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 TSPYL6Q8N831 410 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 NUF2Q9BZD4 464 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 LMBRD1Q9NUN5 540 aa15.28■□□□□ 0.04
CLCN6-201ENST00000312413 PLS1Q14651 629 aa15.27■□□□□ 0.04
CLCN6-201ENST00000312413 HHATQ5VTY9 493 aa15.27■□□□□ 0.04
CLCN6-201ENST00000312413 POLR2DO15514 142 aaKnown RBP15.27■□□□□ 0.04
CLCN6-201ENST00000312413 DEXIO95424 95 aa15.27■□□□□ 0.04
CLCN6-201ENST00000312413 RPGRIP1Q96KN7 1286 aa15.27■□□□□ 0.04
CLCN6-201ENST00000312413 AGTPBP1Q9UPW5 1226 aa15.27■□□□□ 0.04
CLCN6-201ENST00000312413 ZNF202O95125 648 aa15.27■□□□□ 0.03
CLCN6-201ENST00000312413 LETM2Q2VYF4 491 aa15.27■□□□□ 0.03
CLCN6-201ENST00000312413 KLHL7Q8IXQ5 586 aa15.27■□□□□ 0.03
CLCN6-201ENST00000312413 MIGA1Q8NAN2 632 aa15.27■□□□□ 0.03
CLCN6-201ENST00000312413 MRRFQ96E11 262 aaKnown RBP15.27■□□□□ 0.03
CLCN6-201ENST00000312413 RNF10Q8N5U6 811 aaKnown RBP15.27■□□□□ 0.03
CLCN6-201ENST00000312413 VGLL3A8MV65 326 aa15.26■□□□□ 0.03
CLCN6-201ENST00000312413 PICALMQ13492 652 aa15.26■□□□□ 0.03
CLCN6-201ENST00000312413 GBP7Q8N8V2 638 aaPredicted RBP15.26■□□□□ 0.03
CLCN6-201ENST00000312413 PLCB1Q9NQ66 1216 aa15.26■□□□□ 0.03
CLCN6-201ENST00000312413 ASIC3Q9UHC3 531 aa15.26■□□□□ 0.03
CLCN6-201ENST00000312413 MAPK8IP1Q9UQF2 711 aa15.26■□□□□ 0.03
CLCN6-201ENST00000312413 SLC27A2O14975 620 aa15.26■□□□□ 0.03
CLCN6-201ENST00000312413 PPP1R21Q6ZMI0 780 aa15.26■□□□□ 0.03
CLCN6-201ENST00000312413 TMEM87BQ96K49 555 aa15.26■□□□□ 0.03
CLCN6-201ENST00000312413 SNX14Q9Y5W7 946 aa15.26■□□□□ 0.03
CLCN6-201ENST00000312413 SETSIPP0DME0 302 aa15.26■□□□□ 0.03
CLCN6-201ENST00000312413 KRT5P13647 590 aa15.26■□□□□ 0.03
CLCN6-201ENST00000312413 IRX5P78411 483 aaPredicted RBP15.26■□□□□ 0.03
CLCN6-201ENST00000312413 CETN3O15182 167 aa15.25■□□□□ 0.03
CLCN6-201ENST00000312413 GADD45BO75293 160 aaPredicted RBP15.25■□□□□ 0.03
CLCN6-201ENST00000312413 MTX1Q13505 466 aa15.25■□□□□ 0.03
CLCN6-201ENST00000312413 KRT71Q3SY84 523 aa15.25■□□□□ 0.03
CLCN6-201ENST00000312413 AKAP4Q5JQC9 854 aa15.25■□□□□ 0.03
CLCN6-201ENST00000312413 GEN1Q17RS7 908 aa15.25■□□□□ 0.03
CLCN6-201ENST00000312413 WDR44Q5JSH3 913 aa15.25■□□□□ 0.03
CLCN6-201ENST00000312413 ZBTB7BO15156 539 aaPredicted RBP15.25■□□□□ 0.03
CLCN6-201ENST00000312413 STX10O60499 249 aa15.25■□□□□ 0.03
CLCN6-201ENST00000312413 PLCG2P16885 1265 aa15.25■□□□□ 0.03
CLCN6-201ENST00000312413 CWF19L2Q2TBE0 894 aaKnown RBP15.25■□□□□ 0.03
CLCN6-201ENST00000312413 KRT28Q7Z3Y7 464 aa15.25■□□□□ 0.03
CLCN6-201ENST00000312413 CCT6BQ92526 530 aa15.25■□□□□ 0.03
CLCN6-201ENST00000312413 SLF1Q9BQI6 1058 aa15.25■□□□□ 0.03
CLCN6-201ENST00000312413 PCF11O94913 1555 aaKnown RBP15.25■□□□□ 0.03
CLCN6-201ENST00000312413 SLC39A6Q13433 755 aa15.25■□□□□ 0.03
CLCN6-201ENST00000312413 LONRF3Q496Y0 759 aa15.25■□□□□ 0.03
CLCN6-201ENST00000312413 DNAJC5BQ9UF47 199 aa15.25■□□□□ 0.03
CLCN6-201ENST00000312413 GAS8O95995 478 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 RASSF2P50749 326 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 PSMD6Q15008 389 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 BEND3Q5T5X7 828 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 MICAL1Q8TDZ2 1067 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 EPSTI1Q96J88 318 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 TAB2Q9NYJ8 693 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 ZNF500O60304 480 aaPredicted RBP15.24■□□□□ 0.03
CLCN6-201ENST00000312413 RPS6KA1Q15418 735 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 NLRP3Q96P20 1036 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 ZKSCAN3Q9BRR0 538 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 TACC3Q9Y6A5 838 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 TXNDC9O14530 226 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 NCBP1Q09161 790 aaKnown RBP15.24■□□□□ 0.03
CLCN6-201ENST00000312413 ANKRD20A3Q5VUR7 823 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 PSMB7Q99436 277 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 CAPN7Q9Y6W3 813 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 RNF40O75150 1001 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 BIRC3Q13489 604 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 LIN9Q5TKA1 542 aa15.24■□□□□ 0.03
CLCN6-201ENST00000312413 DIS3L2Q8IYB7 885 aaKnown RBP15.24■□□□□ 0.03
CLCN6-201ENST00000312413 SYCE1Q8N0S2 351 aa15.23■□□□□ 0.03
CLCN6-201ENST00000312413 ITIH3Q06033 890 aa15.23■□□□□ 0.03
CLCN6-201ENST00000312413 RASA3Q14644 834 aa15.23■□□□□ 0.03
CLCN6-201ENST00000312413 FNBP1Q96RU3 617 aa15.23■□□□□ 0.03
CLCN6-201ENST00000312413 TMEM63CQ9P1W3 806 aa15.23■□□□□ 0.03
CLCN6-201ENST00000312413 F8W031 263 aaPredicted RBP15.23■□□□□ 0.03
CLCN6-201ENST00000312413 RFC4P35249 363 aa15.23■□□□□ 0.03
CLCN6-201ENST00000312413 WHAMMP3Q1A5X7 153 aa15.23■□□□□ 0.03
CLCN6-201ENST00000312413 ZNF804AQ7Z570 1209 aa15.23■□□□□ 0.03
CLCN6-201ENST00000312413 KIFC2Q96AC6 838 aa15.23■□□□□ 0.03
CLCN6-201ENST00000312413 CTTNBP2NLQ9P2B4 639 aa15.23■□□□□ 0.03
CLCN6-201ENST00000312413 DDX41Q9UJV9 622 aaKnown RBP15.23■□□□□ 0.03
CLCN6-201ENST00000312413 I3L4J1 428 aa15.23■□□□□ 0.03
CLCN6-201ENST00000312413 CRCPO75575 148 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms