RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 GOLGB1Q14789 3259 aaKnown RBP13.06□□□□□ -0.32
TRIM59-201ENST00000309784 MROH7-TTC4A0A0A0MT08 1334 aa13.06□□□□□ -0.32
TRIM59-201ENST00000309784 WTAPQ15007 396 aa13.06□□□□□ -0.32
TRIM59-201ENST00000309784 ATP8A2Q9NTI2 1148 aa13.06□□□□□ -0.32
TRIM59-201ENST00000309784 ANGEL1Q9UNK9 670 aaKnown RBP13.06□□□□□ -0.32
TRIM59-201ENST00000309784 DHX16O60231 1041 aaKnown RBP13.06□□□□□ -0.32
TRIM59-201ENST00000309784 JAK2O60674 1132 aa13.06□□□□□ -0.32
TRIM59-201ENST00000309784 ALX1Q15699 326 aa13.06□□□□□ -0.32
TRIM59-201ENST00000309784 UPF1Q92900 1129 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRIM59-201ENST00000309784 TEKT1Q969V4 418 aa13.06□□□□□ -0.32
TRIM59-201ENST00000309784 PDS5AQ29RF7 1337 aaKnown RBP13.05□□□□□ -0.32
TRIM59-201ENST00000309784 DDX11L8A8MPP1 907 aa13.05□□□□□ -0.32
TRIM59-201ENST00000309784 STX6O43752 255 aa13.05□□□□□ -0.32
TRIM59-201ENST00000309784 CYB5R4Q7L1T6 521 aa13.05□□□□□ -0.32
TRIM59-201ENST00000309784 RTKN2Q8IZC4 609 aa13.05□□□□□ -0.32
TRIM59-201ENST00000309784 TRIM34Q9BYJ4 488 aa13.05□□□□□ -0.32
TRIM59-201ENST00000309784 ZSWIM5Q9P217 1185 aa13.05□□□□□ -0.32
TRIM59-201ENST00000309784 SMIM22K7EJ46 135 aa13.05□□□□□ -0.32
TRIM59-201ENST00000309784 PDCP20941 246 aa13.05□□□□□ -0.32
TRIM59-201ENST00000309784 METAP2P50579 478 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRIM59-201ENST00000309784 FAM47AQ5JRC9 791 aa13.05□□□□□ -0.32
TRIM59-201ENST00000309784 MB21D2Q8IYB1 491 aaPredicted RBP13.05□□□□□ -0.32
TRIM59-201ENST00000309784 ZNF444Q8N0Y2 327 aaPredicted RBP13.05□□□□□ -0.32
TRIM59-201ENST00000309784 JDP2Q8WYK2 163 aa13.05□□□□□ -0.32
TRIM59-201ENST00000309784 GOLGA8AA7E2F4 631 aa13.05□□□□□ -0.32
TRIM59-201ENST00000309784 GUCY1B3Q02153 619 aa13.05□□□□□ -0.32
TRIM59-201ENST00000309784 USP40Q9NVE5 1235 aa13.05□□□□□ -0.32
TRIM59-201ENST00000309784 ARPP21Q9UBL0 812 aaPredicted RBP13.05□□□□□ -0.32
TRIM59-201ENST00000309784 USP17L3A6NCW0 530 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 USP17L4A6NCW7 530 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 SYT1P21579 422 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 SCRN1Q12765 414 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 GNL2Q13823 731 aaKnown RBP13.04□□□□□ -0.32
TRIM59-201ENST00000309784 CTR9Q6PD62 1173 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 USP17L1Q7RTZ2 530 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 GTF3C6Q969F1 213 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 ZBTB43O43298 467 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 RAD21O60216 631 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 NIM1KQ8IY84 436 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 IL17RAQ96F46 866 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 CHAMP1Q96JM3 812 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 MYH7P12883 1935 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 EXOSC10Q01780 885 aaKnown RBP13.04□□□□□ -0.32
TRIM59-201ENST00000309784 TCP10Q12799 353 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 DYNLL2Q96FJ2 89 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 TMEM87BQ96K49 555 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 SALL1Q9NSC2 1324 aa13.04□□□□□ -0.32
TRIM59-201ENST00000309784 OGFOD1Q8N543 542 aa13.03□□□□□ -0.32
TRIM59-201ENST00000309784 PTPDC1A2A3K4 754 aa13.03□□□□□ -0.32
TRIM59-201ENST00000309784 PDIA3P30101 505 aaKnown RBP13.03□□□□□ -0.32
TRIM59-201ENST00000309784 DAGLAQ9Y4D2 1042 aa13.03□□□□□ -0.32
TRIM59-201ENST00000309784 CACNB3P54284 484 aa13.03□□□□□ -0.32
TRIM59-201ENST00000309784 ANTXR2P58335 489 aa13.03□□□□□ -0.32
TRIM59-201ENST00000309784 IFIT1BQ5T764 474 aaKnown RBP13.03□□□□□ -0.32
TRIM59-201ENST00000309784 NBPF3Q9H094 633 aa13.03□□□□□ -0.32
TRIM59-201ENST00000309784 ATP6V1DQ9Y5K8 247 aa13.03□□□□□ -0.32
TRIM59-201ENST00000309784 BAG4O95429 457 aaKnown RBP13.02□□□□□ -0.32
TRIM59-201ENST00000309784 TSPY3P0CV98 308 aa13.02□□□□□ -0.32
TRIM59-201ENST00000309784 TSPY8P0CW00 308 aa13.02□□□□□ -0.32
TRIM59-201ENST00000309784 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.32
TRIM59-201ENST00000309784 STAG1Q8WVM7 1258 aa13.02□□□□□ -0.32
TRIM59-201ENST00000309784 STX8Q9UNK0 236 aa13.02□□□□□ -0.32
TRIM59-201ENST00000309784 PRPF40AO75400 957 aaKnown RBP13.02□□□□□ -0.33
TRIM59-201ENST00000309784 ATP2B2Q01814 1243 aa13.02□□□□□ -0.33
TRIM59-201ENST00000309784 CERS5Q8N5B7 392 aa13.02□□□□□ -0.33
TRIM59-201ENST00000309784 GDPD2Q9HCC8 539 aa13.02□□□□□ -0.33
TRIM59-201ENST00000309784 DDX49Q9Y6V7 483 aaKnown RBP13.02□□□□□ -0.33
TRIM59-201ENST00000309784 IRS2Q9Y4H2 1338 aa13.02□□□□□ -0.33
TRIM59-201ENST00000309784 KIAA2012Q0VF49 1180 aa13.02□□□□□ -0.33
TRIM59-201ENST00000309784 CRACR2BQ8N4Y2 399 aaPredicted RBP13.02□□□□□ -0.33
TRIM59-201ENST00000309784 PIBF1Q8WXW3 757 aa13.02□□□□□ -0.33
TRIM59-201ENST00000309784 RTFDC1Q9BY42 306 aaPredicted RBP13.02□□□□□ -0.33
TRIM59-201ENST00000309784 ZNF287Q9HBT7 754 aa13.02□□□□□ -0.33
TRIM59-201ENST00000309784 TNKSO95271 1327 aa13.02□□□□□ -0.33
TRIM59-201ENST00000309784 FIBPO43427 364 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 PFKFB2O60825 505 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 EVX2Q03828 476 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 SOGA3Q5TF21 947 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 TAOK3Q9H2K8 898 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 TMOD2Q9NZR1 351 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 ORC3Q9UBD5 711 aaPredicted RBP13.01□□□□□ -0.33
TRIM59-201ENST00000309784 BRPF3Q9ULD4 1205 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 FAM205AQ6ZU69 1335 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 CASZ1Q86V15 1759 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 MPHOSPH10O00566 681 aaKnown RBP13.01□□□□□ -0.33
TRIM59-201ENST00000309784 CRKP46108 304 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 HMGN5P82970 282 aaKnown RBP13.01□□□□□ -0.33
TRIM59-201ENST00000309784 RBM26Q5T8P6 1007 aaKnown RBP13.01□□□□□ -0.33
TRIM59-201ENST00000309784 STRIP1Q5VSL9 837 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 SLC44A5Q8NCS7 719 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 ZNF274Q96GC6 653 aaPredicted RBP13.01□□□□□ -0.33
TRIM59-201ENST00000309784 ARAP2Q8WZ64 1704 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 MYH13Q9UKX3 1938 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 SH2B2O14492 632 aaPredicted RBP13.01□□□□□ -0.33
TRIM59-201ENST00000309784 ZSCAN22P10073 491 aaPredicted RBP13.01□□□□□ -0.33
TRIM59-201ENST00000309784 ADD1P35611 737 aaKnown RBP13.01□□□□□ -0.33
TRIM59-201ENST00000309784 TGFB2P61812 414 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 GIMAP6Q6P9H5 292 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 CERS3Q8IU89 383 aa13.01□□□□□ -0.33
TRIM59-201ENST00000309784 SENP2Q9HC62 589 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms