RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 TDRD12Q587J7 1177 aaKnown RBP12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 PI16Q6UXB8 463 aa12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 ZNF654Q8IZM8 581 aa12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 TTLL11Q8NHH1 800 aa12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 STX17P56962 302 aa12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 MYL5Q02045 173 aa12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 GPT2Q8TD30 523 aa12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 KCNJ14Q9UNX9 436 aa12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 TMEM131LA2VDJ0 1609 aa12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 ZNF202O95125 648 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 SCRN1Q12765 414 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 ENOX2Q16206 610 aaKnown RBP12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 KRT79Q5XKE5 535 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 USO1O60763 962 aaKnown RBP12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 DPP8Q6V1X1 898 aaPredicted RBP12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 PIK3AP1Q6ZUJ8 805 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 MAPKAPK5Q8IW41 473 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 USP28Q96RU2 1077 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 PAXBP1Q9Y5B6 917 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 DIP2AQ14689 1571 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 TFAP4Q01664 338 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 TCERG1LQ5VWI1 586 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 TAF4BQ92750 862 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 OSBP2Q969R2 916 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 TRIM21P19474 475 aaKnown RBP12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 GNG11P61952 73 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 TBC1D22AQ8WUA7 517 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 VEZTQ9HBM0 779 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 CBX8Q9HC52 389 aa12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.98□□□□□ -0.33
PCDHGC3-201ENST00000308177 HLFQ16534 295 aa12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 TMCO3Q6UWJ1 677 aa12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 VPS36Q86VN1 386 aa12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 SMARCC2Q8TAQ2 1214 aa12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 TGFBRAP1Q8WUH2 860 aa12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 TMX1Q9H3N1 280 aa12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 M0R2C6 588 aa12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 LIG1P18858 919 aa12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 LETM2Q2VYF4 491 aa12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 FAM47AQ5JRC9 791 aa12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 TRMT1LQ7Z2T5 733 aaKnown RBP12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 ARPP21Q9UBL0 812 aaPredicted RBP12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 hCG_1642624A0A1W2PR95 340 aa12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 KCNQ4P56696 695 aa12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 POLR2DO15514 142 aaKnown RBP12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 ADD2P35612 726 aa12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 THRAP3Q9Y2W1 955 aaKnown RBP12.97□□□□□ -0.33
PCDHGC3-201ENST00000308177 SPDYE3A6NKU9 549 aa12.96□□□□□ -0.33
PCDHGC3-201ENST00000308177 TBCAO75347 108 aaKnown RBP12.96□□□□□ -0.33
PCDHGC3-201ENST00000308177 EIF3JO75822 258 aaKnown RBP12.96□□□□□ -0.33
PCDHGC3-201ENST00000308177 MATR3P43243 847 aaKnown RBP eCLIP12.96□□□□□ -0.33
PCDHGC3-201ENST00000308177 SPECC1Q5M775 1068 aa12.96□□□□□ -0.33
PCDHGC3-201ENST00000308177 TTC38Q5R3I4 469 aa12.96□□□□□ -0.33
PCDHGC3-201ENST00000308177 ADALQ6DHV7 355 aa12.96□□□□□ -0.33
PCDHGC3-201ENST00000308177 SAMM50Q9Y512 469 aa12.96□□□□□ -0.33
PCDHGC3-201ENST00000308177 AXDND1Q5T1B0 1012 aaPredicted RBP12.96□□□□□ -0.33
PCDHGC3-201ENST00000308177 FANCBQ8NB91 859 aa12.96□□□□□ -0.33
PCDHGC3-201ENST00000308177 ZMYM6O95789 1325 aa12.96□□□□□ -0.33
PCDHGC3-201ENST00000308177 MFSD14BQ5SR56 506 aa12.96□□□□□ -0.34
PCDHGC3-201ENST00000308177 WWC2Q6AWC2 1192 aa12.96□□□□□ -0.34
PCDHGC3-201ENST00000308177 STXBP4Q6ZWJ1 553 aa12.96□□□□□ -0.34
PCDHGC3-201ENST00000308177 PLIN2Q99541 437 aa12.96□□□□□ -0.34
PCDHGC3-201ENST00000308177 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.34
PCDHGC3-201ENST00000308177 VPS54Q9P1Q0 977 aa12.96□□□□□ -0.34
PCDHGC3-201ENST00000308177 WWC3Q9ULE0 1092 aa12.96□□□□□ -0.34
PCDHGC3-201ENST00000308177 USP32Q8NFA0 1604 aa12.96□□□□□ -0.34
PCDHGC3-201ENST00000308177 TNKSO95271 1327 aa12.96□□□□□ -0.34
PCDHGC3-201ENST00000308177 MROH1Q8NDA8 1641 aa12.96□□□□□ -0.34
PCDHGC3-201ENST00000308177 EIF6P56537 245 aaKnown RBP12.96□□□□□ -0.34
PCDHGC3-201ENST00000308177 GAS2L3Q86XJ1 694 aa12.96□□□□□ -0.34
PCDHGC3-201ENST00000308177 PUS7LQ9H0K6 701 aaKnown RBP12.96□□□□□ -0.34
PCDHGC3-201ENST00000308177 NBPF26B4DH59 902 aa12.95□□□□□ -0.34
PCDHGC3-201ENST00000308177 MRPL12P52815 198 aaKnown RBP12.95□□□□□ -0.34
PCDHGC3-201ENST00000308177 NBPF14Q5TI25 921 aa12.95□□□□□ -0.34
PCDHGC3-201ENST00000308177 SUSD4Q5VX71 490 aa12.95□□□□□ -0.34
PCDHGC3-201ENST00000308177 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
PCDHGC3-201ENST00000308177 NBPF15Q8N660 670 aa12.95□□□□□ -0.34
PCDHGC3-201ENST00000308177 FBXO18Q8NFZ0 1043 aa12.95□□□□□ -0.34
PCDHGC3-201ENST00000308177 ZNF804BA4D1E1 1349 aa12.95□□□□□ -0.34
PCDHGC3-201ENST00000308177 DYNC1I1O14576 645 aa12.95□□□□□ -0.34
PCDHGC3-201ENST00000308177 ZSCAN10Q96SZ4 725 aaPredicted RBP12.95□□□□□ -0.34
PCDHGC3-201ENST00000308177 MED23Q9ULK4 1368 aa12.95□□□□□ -0.34
PCDHGC3-201ENST00000308177 LARGE1O95461 756 aa12.95□□□□□ -0.34
PCDHGC3-201ENST00000308177 ERFEQ4G0M1 354 aa12.95□□□□□ -0.34
PCDHGC3-201ENST00000308177 NR1I2O75469 434 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 FAM182BQ5T319 152 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 CMTR1Q8N1G2 835 aaKnown RBP12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 JDP2Q8WYK2 163 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 ERLIN2O94905 339 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 GTF2IP78347 998 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 NSUN7Q8NE18 718 aaKnown RBP12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 GBP3Q9H0R5 595 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 PALLDQ8WX93 1383 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 ATP10DQ9P241 1426 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 H0YIN7 160 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 STK32BQ9NY57 414 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 AKR1B10O60218 316 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 APBA3O96018 575 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms