RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 SH3BP5LQ7L8J4 393 aa25.38■■□□□ 1.65
MRPL39-201ENST00000307301 OPTNQ96CV9 577 aa25.38■■□□□ 1.65
MRPL39-201ENST00000307301 NOL10Q9BSC4 688 aaKnown RBP25.38■■□□□ 1.65
MRPL39-201ENST00000307301 ZNF341Q9BYN7 854 aa25.38■■□□□ 1.65
MRPL39-201ENST00000307301 CSADQ9Y600 493 aa25.38■■□□□ 1.65
MRPL39-201ENST00000307301 CASP8AP2Q9UKL3 1982 aa25.38■■□□□ 1.65
MRPL39-201ENST00000307301 IGSF3O75054 1194 aa25.37■■□□□ 1.65
MRPL39-201ENST00000307301 MAP4K4O95819 1239 aaPredicted RBP25.37■■□□□ 1.65
MRPL39-201ENST00000307301 ZSCAN29Q8IWY8 852 aaPredicted RBP25.37■■□□□ 1.65
MRPL39-201ENST00000307301 SH3RF3Q8TEJ3 882 aaPredicted RBP25.37■■□□□ 1.65
MRPL39-201ENST00000307301 CNKSR2Q8WXI2 1034 aa25.37■■□□□ 1.65
MRPL39-201ENST00000307301 ZKSCAN4Q969J2 545 aaPredicted RBP25.37■■□□□ 1.65
MRPL39-201ENST00000307301 AATFQ9NY61 560 aaKnown RBP eCLIP25.37■■□□□ 1.65
MRPL39-201ENST00000307301 ATRNL1Q5VV63 1379 aa25.36■■□□□ 1.65
MRPL39-201ENST00000307301 DDTLA6NHG4 134 aaPredicted RBP25.36■■□□□ 1.65
MRPL39-201ENST00000307301 MANSC4A6NHS7 340 aaPredicted RBP25.36■■□□□ 1.65
MRPL39-201ENST00000307301 TEX11Q8IYF3 940 aa25.36■■□□□ 1.65
MRPL39-201ENST00000307301 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.36■■□□□ 1.65
MRPL39-201ENST00000307301 SNCAIPQ9Y6H5 919 aa25.36■■□□□ 1.65
MRPL39-201ENST00000307301 BAG3O95817 575 aa25.35■■□□□ 1.65
MRPL39-201ENST00000307301 TNS4Q8IZW8 715 aa25.35■■□□□ 1.65
MRPL39-201ENST00000307301 DNAJC2Q99543 621 aaKnown RBP25.35■■□□□ 1.65
MRPL39-201ENST00000307301 NPM3O75607 178 aaKnown RBP25.34■■□□□ 1.65
MRPL39-201ENST00000307301 CYP7A1P22680 504 aa25.34■■□□□ 1.65
MRPL39-201ENST00000307301 INPP5BP32019 993 aa25.34■■□□□ 1.65
MRPL39-201ENST00000307301 PPP4CP60510 307 aa25.34■■□□□ 1.65
MRPL39-201ENST00000307301 MAGEB6Q8N7X4 407 aa25.34■■□□□ 1.65
MRPL39-201ENST00000307301 ZNF112Q9UJU3 913 aa25.34■■□□□ 1.65
MRPL39-201ENST00000307301 PLCG2P16885 1265 aa25.33■■□□□ 1.65
MRPL39-201ENST00000307301 MAP3K12Q12852 859 aa25.33■■□□□ 1.65
MRPL39-201ENST00000307301 TTF1Q15361 905 aaPredicted RBP25.33■■□□□ 1.65
MRPL39-201ENST00000307301 OTUD5Q96G74 571 aa25.33■■□□□ 1.65
MRPL39-201ENST00000307301 OSBPL5Q9H0X9 879 aaPredicted RBP25.33■■□□□ 1.65
MRPL39-201ENST00000307301 GOLIM4O00461 696 aa25.32■■□□□ 1.64
MRPL39-201ENST00000307301 ATP5JP18859 108 aa25.32■■□□□ 1.64
MRPL39-201ENST00000307301 EDC3Q96F86 508 aaKnown RBP25.32■■□□□ 1.64
MRPL39-201ENST00000307301 BOLA2Q9H3K6 86 aa25.32■■□□□ 1.64
MRPL39-201ENST00000307301 COL2A1P02458 1487 aaPredicted RBP25.32■■□□□ 1.64
MRPL39-201ENST00000307301 SIPA1L1O43166 1804 aa25.31■■□□□ 1.64
MRPL39-201ENST00000307301 SPDYE5A6NIY4 337 aa25.31■■□□□ 1.64
MRPL39-201ENST00000307301 SLURP2P0DP57 97 aa25.31■■□□□ 1.64
MRPL39-201ENST00000307301 INHBEP58166 350 aa25.31■■□□□ 1.64
MRPL39-201ENST00000307301 DYNLL1P63167 89 aaKnown RBP25.31■■□□□ 1.64
MRPL39-201ENST00000307301 IFNL1Q8IU54 200 aa25.31■■□□□ 1.64
MRPL39-201ENST00000307301 MIGA1Q8NAN2 632 aa25.31■■□□□ 1.64
MRPL39-201ENST00000307301 MYH7P12883 1935 aa25.31■■□□□ 1.64
MRPL39-201ENST00000307301 TBC1D8O95759 1140 aa25.3■■□□□ 1.64
MRPL39-201ENST00000307301 ERO1BQ86YB8 467 aa25.3■■□□□ 1.64
MRPL39-201ENST00000307301 DOCK1Q14185 1865 aa25.3■■□□□ 1.64
MRPL39-201ENST00000307301 IGF2BP3O00425 579 aaKnown RBP eCLIP25.29■■□□□ 1.64
MRPL39-201ENST00000307301 MAP3K10Q02779 954 aa25.29■■□□□ 1.64
MRPL39-201ENST00000307301 TGFBRAP1Q8WUH2 860 aa25.29■■□□□ 1.64
MRPL39-201ENST00000307301 MS4A4AQ96JQ5 239 aa25.29■■□□□ 1.64
MRPL39-201ENST00000307301 HAUS7Q99871 368 aa25.29■■□□□ 1.64
MRPL39-201ENST00000307301 PAG1Q9NWQ8 432 aa25.29■■□□□ 1.64
MRPL39-201ENST00000307301 MYH1P12882 1939 aa25.29■■□□□ 1.64
MRPL39-201ENST00000307301 PHF20L1A8MW92 1017 aa25.28■■□□□ 1.64
MRPL39-201ENST00000307301 TMED8Q6PL24 325 aaPredicted RBP25.28■■□□□ 1.64
MRPL39-201ENST00000307301 MAPKAPK5Q8IW41 473 aa25.28■■□□□ 1.64
MRPL39-201ENST00000307301 TESPA1A2RU30 521 aaPredicted RBP25.27■■□□□ 1.64
MRPL39-201ENST00000307301 PDE6AP16499 860 aa25.27■■□□□ 1.64
MRPL39-201ENST00000307301 NOL9Q5SY16 702 aaKnown RBP25.27■■□□□ 1.64
MRPL39-201ENST00000307301 SLC9C2Q5TAH2 1124 aa25.27■■□□□ 1.64
MRPL39-201ENST00000307301 PTPN18Q99952 460 aa25.27■■□□□ 1.64
MRPL39-201ENST00000307301 SUPT16HQ9Y5B9 1047 aaKnown RBP25.27■■□□□ 1.64
MRPL39-201ENST00000307301 ATAD5Q96QE3 1844 aa25.27■■□□□ 1.64
MRPL39-201ENST00000307301 FLT1P17948 1338 aa25.27■■□□□ 1.64
MRPL39-201ENST00000307301 FAM196BA6NMK8 535 aa25.26■■□□□ 1.63
MRPL39-201ENST00000307301 ALDH1A1P00352 501 aa25.26■■□□□ 1.63
MRPL39-201ENST00000307301 GTF2A2P52657 109 aa25.26■■□□□ 1.63
MRPL39-201ENST00000307301 PPIL2Q13356 520 aa25.26■■□□□ 1.63
MRPL39-201ENST00000307301 IFFO2Q5TF58 517 aa25.26■■□□□ 1.63
MRPL39-201ENST00000307301 ECHDC1Q9NTX5 307 aa25.26■■□□□ 1.63
MRPL39-201ENST00000307301 CCL15-CCL14A0A0B4J2E2 113 aa25.25■■□□□ 1.63
MRPL39-201ENST00000307301 IRF6O14896 467 aa25.25■■□□□ 1.63
MRPL39-201ENST00000307301 PPATQ06203 517 aa25.25■■□□□ 1.63
MRPL39-201ENST00000307301 CCL15Q16663 113 aa25.25■■□□□ 1.63
MRPL39-201ENST00000307301 CERS3Q8IU89 383 aa25.25■■□□□ 1.63
MRPL39-201ENST00000307301 BRI3BPQ8WY22 251 aa25.25■■□□□ 1.63
MRPL39-201ENST00000307301 CFHR5Q9BXR6 569 aa25.25■■□□□ 1.63
MRPL39-201ENST00000307301 R3HDMLQ9H3Y0 253 aa25.25■■□□□ 1.63
MRPL39-201ENST00000307301 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.25■■□□□ 1.63
MRPL39-201ENST00000307301 PHIPQ8WWQ0 1821 aa25.24■■□□□ 1.63
MRPL39-201ENST00000307301 ZNF532Q9HCE3 1301 aa25.24■■□□□ 1.63
MRPL39-201ENST00000307301 TBC1D12O60347 775 aa25.24■■□□□ 1.63
MRPL39-201ENST00000307301 TSHZ3Q63HK5 1081 aa25.24■■□□□ 1.63
MRPL39-201ENST00000307301 EXOC6Q8TAG9 804 aa25.24■■□□□ 1.63
MRPL39-201ENST00000307301 NAV1Q8NEY1 1877 aa25.23■■□□□ 1.63
MRPL39-201ENST00000307301 TCRBV5S4A2TA0A5A2 114 aa25.23■■□□□ 1.63
MRPL39-201ENST00000307301 HDAC1Q13547 482 aaPredicted RBP25.23■■□□□ 1.63
MRPL39-201ENST00000307301 AAMPQ13685 434 aa25.23■■□□□ 1.63
MRPL39-201ENST00000307301 OTUD7BQ6GQQ9 843 aa25.23■■□□□ 1.63
MRPL39-201ENST00000307301 SCYL3Q8IZE3 742 aa25.23■■□□□ 1.63
MRPL39-201ENST00000307301 GPATCH3Q96I76 525 aa25.23■■□□□ 1.63
MRPL39-201ENST00000307301 RIOK1Q9BRS2 568 aaKnown RBP25.23■■□□□ 1.63
MRPL39-201ENST00000307301 DHX36Q9H2U1 1008 aaKnown RBP25.23■■□□□ 1.63
MRPL39-201ENST00000307301 SAP30BPQ9UHR5 308 aaKnown RBP25.23■■□□□ 1.63
MRPL39-201ENST00000307301 MAGEB6P1A0A0J9YX57 407 aa25.22■■□□□ 1.63
MRPL39-201ENST00000307301 USP5P45974 858 aa25.22■■□□□ 1.63
MRPL39-201ENST00000307301 SNAPC2Q13487 334 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms