RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 CNTNAP1P78357 1384 aa32.45■■■□□ 2.79
HDAC3-201ENST00000305264 REC8O95072 547 aa32.45■■■□□ 2.78
HDAC3-201ENST00000305264 POTEIP0CG38 1075 aa32.45■■■□□ 2.78
HDAC3-201ENST00000305264 POTEJP0CG39 1038 aa32.45■■■□□ 2.78
HDAC3-201ENST00000305264 ZFPM1Q8IX07 1006 aa32.45■■■□□ 2.78
HDAC3-201ENST00000305264 RPAP1Q9BWH6 1393 aaPredicted RBP32.45■■■□□ 2.78
HDAC3-201ENST00000305264 BACH2Q9BYV9 841 aa32.44■■■□□ 2.78
HDAC3-201ENST00000305264 FKBP1CQ5VVH2 108 aa32.43■■■□□ 2.78
HDAC3-201ENST00000305264 OSBPL5Q9H0X9 879 aaPredicted RBP32.43■■■□□ 2.78
HDAC3-201ENST00000305264 LAMB1P07942 1786 aa32.43■■■□□ 2.78
HDAC3-201ENST00000305264 TDO2P48775 406 aa32.43■■■□□ 2.78
HDAC3-201ENST00000305264 NACAP1Q9BZK3 213 aa32.43■■■□□ 2.78
HDAC3-201ENST00000305264 SAP30BPQ9UHR5 308 aaKnown RBP32.43■■■□□ 2.78
HDAC3-201ENST00000305264 FGAP02671 866 aa32.42■■■□□ 2.78
HDAC3-201ENST00000305264 GIMAP6Q6P9H5 292 aa32.42■■■□□ 2.78
HDAC3-201ENST00000305264 MAP4K1Q92918 833 aa32.42■■■□□ 2.78
HDAC3-201ENST00000305264 NPM3O75607 178 aaKnown RBP32.41■■■□□ 2.78
HDAC3-201ENST00000305264 SLC4A8Q2Y0W8 1093 aa32.41■■■□□ 2.78
HDAC3-201ENST00000305264 NAPBQ9H115 298 aa32.41■■■□□ 2.78
HDAC3-201ENST00000305264 MCM9Q9NXL9 1143 aa32.41■■■□□ 2.78
HDAC3-201ENST00000305264 PITPNM2Q9BZ72 1349 aa32.41■■■□□ 2.78
HDAC3-201ENST00000305264 APOBEC3FQ8IUX4 373 aaKnown RBP32.41■■■□□ 2.78
HDAC3-201ENST00000305264 GPBP1L1Q9HC44 474 aaPredicted RBP32.41■■■□□ 2.78
HDAC3-201ENST00000305264 LAMA4Q16363 1823 aa32.41■■■□□ 2.78
HDAC3-201ENST00000305264 ENTPD3O75355 529 aa32.4■■■□□ 2.78
HDAC3-201ENST00000305264 ALX1Q15699 326 aa32.4■■■□□ 2.78
HDAC3-201ENST00000305264 ZC3H15Q8WU90 426 aaKnown RBP32.4■■■□□ 2.78
HDAC3-201ENST00000305264 DDRGK1Q96HY6 314 aa32.4■■■□□ 2.78
HDAC3-201ENST00000305264 ZMYM6O95789 1325 aa32.4■■■□□ 2.78
HDAC3-201ENST00000305264 EVX2Q03828 476 aa32.39■■■□□ 2.78
HDAC3-201ENST00000305264 TNFAIP1Q13829 316 aa32.39■■■□□ 2.78
HDAC3-201ENST00000305264 TMEM39BQ9GZU3 492 aa32.39■■■□□ 2.78
HDAC3-201ENST00000305264 PALD1Q9ULE6 856 aa32.39■■■□□ 2.78
HDAC3-201ENST00000305264 RBM8AQ9Y5S9 174 aaKnown RBP32.39■■■□□ 2.78
HDAC3-201ENST00000305264 YY1P25490 414 aa32.39■■■□□ 2.78
HDAC3-201ENST00000305264 FAM83AQ86UY5 434 aa32.39■■■□□ 2.78
HDAC3-201ENST00000305264 PGAP2Q9UHJ9 254 aa32.39■■■□□ 2.78
HDAC3-201ENST00000305264 SIPA1L1O43166 1804 aa32.38■■■□□ 2.77
HDAC3-201ENST00000305264 CYP2D7A0A087X1C5 515 aa32.38■■■□□ 2.77
HDAC3-201ENST00000305264 RASA3Q14644 834 aa32.38■■■□□ 2.77
HDAC3-201ENST00000305264 CTR9Q6PD62 1173 aa32.38■■■□□ 2.77
HDAC3-201ENST00000305264 SH3BP5LQ7L8J4 393 aa32.38■■■□□ 2.77
HDAC3-201ENST00000305264 USP17L12C9JPN9 530 aa32.38■■■□□ 2.77
HDAC3-201ENST00000305264 USP17L21D6R901 530 aa32.38■■■□□ 2.77
HDAC3-201ENST00000305264 CYP2D6P10635 497 aa32.38■■■□□ 2.77
HDAC3-201ENST00000305264 CDAN1Q8IWY9 1227 aa32.38■■■□□ 2.77
HDAC3-201ENST00000305264 FAM151AQ8WW52 585 aa32.38■■■□□ 2.77
HDAC3-201ENST00000305264 DCPSQ96C86 337 aaKnown RBP32.38■■■□□ 2.77
HDAC3-201ENST00000305264 COL2A1P02458 1487 aaPredicted RBP32.37■■■□□ 2.77
HDAC3-201ENST00000305264 SMIM22K7EJ46 135 aa32.37■■■□□ 2.77
HDAC3-201ENST00000305264 TNNI2P48788 182 aa32.37■■■□□ 2.77
HDAC3-201ENST00000305264 USP26Q9BXU7 913 aa32.37■■■□□ 2.77
HDAC3-201ENST00000305264 DEFB129Q9H1M3 183 aa32.37■■■□□ 2.77
HDAC3-201ENST00000305264 CLEC11AQ9Y240 323 aa32.37■■■□□ 2.77
HDAC3-201ENST00000305264 U3KPZ7 1027 aaPredicted RBP32.37■■■□□ 2.77
HDAC3-201ENST00000305264 DDTLA6NHG4 134 aaPredicted RBP32.36■■■□□ 2.77
HDAC3-201ENST00000305264 ARPP21Q9UBL0 812 aaPredicted RBP32.36■■■□□ 2.77
HDAC3-201ENST00000305264 ATRNL1Q5VV63 1379 aa32.36■■■□□ 2.77
HDAC3-201ENST00000305264 ZSCAN29Q8IWY8 852 aaPredicted RBP32.35■■■□□ 2.77
HDAC3-201ENST00000305264 ADM5C9JUS6 153 aa32.34■■■□□ 2.77
HDAC3-201ENST00000305264 MINDY4BA8MYZ0 360 aa32.34■■■□□ 2.77
HDAC3-201ENST00000305264 EIF5BO60841 1220 aaKnown RBP32.34■■■□□ 2.77
HDAC3-201ENST00000305264 POLR3DP05423 398 aaPredicted RBP32.34■■■□□ 2.77
HDAC3-201ENST00000305264 PLCD1P51178 756 aa32.34■■■□□ 2.77
HDAC3-201ENST00000305264 HAND2P61296 217 aa32.34■■■□□ 2.77
HDAC3-201ENST00000305264 KRT26Q7Z3Y9 468 aa32.34■■■□□ 2.77
HDAC3-201ENST00000305264 LDHDQ86WU2 507 aa32.34■■■□□ 2.77
HDAC3-201ENST00000305264 SBK1Q52WX2 424 aa32.33■■■□□ 2.77
HDAC3-201ENST00000305264 DLK2Q6UY11 383 aa32.33■■■□□ 2.77
HDAC3-201ENST00000305264 SULF1Q8IWU6 871 aa32.33■■■□□ 2.77
HDAC3-201ENST00000305264 TEPSINQ96N21 525 aa32.33■■■□□ 2.77
HDAC3-201ENST00000305264 CTNNA3Q9UI47 895 aa32.33■■■□□ 2.77
HDAC3-201ENST00000305264 NECTIN1Q15223 517 aa32.32■■■□□ 2.77
HDAC3-201ENST00000305264 C12orf60Q5U649 245 aa32.32■■■□□ 2.77
HDAC3-201ENST00000305264 MAP1SQ66K74 1059 aaPredicted RBP32.32■■■□□ 2.77
HDAC3-201ENST00000305264 PRAMEF18Q5VWM3 479 aa32.32■■■□□ 2.76
HDAC3-201ENST00000305264 EPB41L2O43491 1005 aaKnown RBP32.31■■■□□ 2.76
HDAC3-201ENST00000305264 PPARAQ07869 468 aa32.31■■■□□ 2.76
HDAC3-201ENST00000305264 CSRNP1Q96S65 589 aa32.31■■■□□ 2.76
HDAC3-201ENST00000305264 NBPF3Q9H094 633 aa32.31■■■□□ 2.76
HDAC3-201ENST00000305264 DHX36Q9H2U1 1008 aaKnown RBP32.31■■■□□ 2.76
HDAC3-201ENST00000305264 CYP21A2P08686 494 aa32.3■■■□□ 2.76
HDAC3-201ENST00000305264 AMOTL1Q8IY63 956 aa32.3■■■□□ 2.76
HDAC3-201ENST00000305264 GLIS2Q9BZE0 524 aaPredicted RBP32.3■■■□□ 2.76
HDAC3-201ENST00000305264 TAF6LQ9Y6J9 622 aa32.3■■■□□ 2.76
HDAC3-201ENST00000305264 KIF3CO14782 793 aa32.3■■■□□ 2.76
HDAC3-201ENST00000305264 SLURP2P0DP57 97 aa32.3■■■□□ 2.76
HDAC3-201ENST00000305264 IMMTQ16891 758 aaKnown RBP32.3■■■□□ 2.76
HDAC3-201ENST00000305264 CREB3L3Q68CJ9 461 aa32.3■■■□□ 2.76
HDAC3-201ENST00000305264 USP48Q86UV5 1035 aa32.3■■■□□ 2.76
HDAC3-201ENST00000305264 PPP2R3BQ9Y5P8 575 aa32.3■■■□□ 2.76
HDAC3-201ENST00000305264 CTDSPL2Q05D32 466 aa32.29■■■□□ 2.76
HDAC3-201ENST00000305264 ZNF784Q8NCA9 323 aaPredicted RBP32.29■■■□□ 2.76
HDAC3-201ENST00000305264 SLC27A2O14975 620 aa32.28■■■□□ 2.76
HDAC3-201ENST00000305264 HLA-DOAP06340 250 aa32.28■■■□□ 2.76
HDAC3-201ENST00000305264 HSPA4P34932 840 aa32.28■■■□□ 2.76
HDAC3-201ENST00000305264 TTC6Q86TZ1 520 aa32.28■■■□□ 2.76
HDAC3-201ENST00000305264 STK11IPQ8N1F8 1099 aa32.28■■■□□ 2.76
HDAC3-201ENST00000305264 ROBO3Q96MS0 1386 aa32.28■■■□□ 2.76
HDAC3-201ENST00000305264 ZNF213O14771 459 aa32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms