RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 ZSCAN29Q8IWY8 852 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC1-201ENST00000303731 CD99L2Q8TCZ2 262 aa20.48■□□□□ 0.87
TRAPPC1-201ENST00000303731 NSUN4Q96CB9 384 aaKnown RBP20.48■□□□□ 0.87
TRAPPC1-201ENST00000303731 KCNH4Q9UQ05 1017 aa20.48■□□□□ 0.87
TRAPPC1-201ENST00000303731 NOP58Q9Y2X3 529 aaKnown RBP20.48■□□□□ 0.87
TRAPPC1-201ENST00000303731 FPGT-TNNI3KV9GXZ4 949 aa20.48■□□□□ 0.87
TRAPPC1-201ENST00000303731 BTBD19C9JJ37 291 aa20.47■□□□□ 0.87
TRAPPC1-201ENST00000303731 TLR2O60603 784 aa20.47■□□□□ 0.87
TRAPPC1-201ENST00000303731 MCAMP43121 646 aa20.47■□□□□ 0.87
TRAPPC1-201ENST00000303731 MAP3K10Q02779 954 aa20.47■□□□□ 0.87
TRAPPC1-201ENST00000303731 TTC39AQ5SRH9 613 aa20.47■□□□□ 0.87
TRAPPC1-201ENST00000303731 ZNF512BQ96KM6 892 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC1-201ENST00000303731 RAI14Q9P0K7 980 aa20.47■□□□□ 0.87
TRAPPC1-201ENST00000303731 PTPN22Q9Y2R2 807 aa20.47■□□□□ 0.87
TRAPPC1-201ENST00000303731 MAST2Q6P0Q8 1798 aa20.46■□□□□ 0.87
TRAPPC1-201ENST00000303731 COL2A1P02458 1487 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC1-201ENST00000303731 RLBP1P12271 317 aa20.46■□□□□ 0.87
TRAPPC1-201ENST00000303731 ANKRD23Q86SG2 305 aa20.46■□□□□ 0.87
TRAPPC1-201ENST00000303731 ZFPM1Q8IX07 1006 aa20.46■□□□□ 0.87
TRAPPC1-201ENST00000303731 SCYL3Q8IZE3 742 aa20.46■□□□□ 0.87
TRAPPC1-201ENST00000303731 NOL10Q9BSC4 688 aaKnown RBP20.46■□□□□ 0.87
TRAPPC1-201ENST00000303731 PICK1Q9NRD5 415 aa20.46■□□□□ 0.87
TRAPPC1-201ENST00000303731 LRP2BPQ9P2M1 347 aa20.46■□□□□ 0.87
TRAPPC1-201ENST00000303731 HTTP42858 3142 aa20.45■□□□□ 0.86
TRAPPC1-201ENST00000303731 CXCL11O14625 94 aa20.45■□□□□ 0.86
TRAPPC1-201ENST00000303731 RHBDL3P58872 404 aa20.45■□□□□ 0.86
TRAPPC1-201ENST00000303731 PICALMQ13492 652 aa20.45■□□□□ 0.86
TRAPPC1-201ENST00000303731 KIF22Q14807 665 aa20.45■□□□□ 0.86
TRAPPC1-201ENST00000303731 PI16Q6UXB8 463 aa20.45■□□□□ 0.86
TRAPPC1-201ENST00000303731 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC1-201ENST00000303731 C1orf115Q9H7X2 142 aa20.45■□□□□ 0.86
TRAPPC1-201ENST00000303731 PHF20L1A8MW92 1017 aa20.44■□□□□ 0.86
TRAPPC1-201ENST00000303731 TBC1D12O60347 775 aa20.44■□□□□ 0.86
TRAPPC1-201ENST00000303731 GNRH1P01148 92 aa20.44■□□□□ 0.86
TRAPPC1-201ENST00000303731 TBC1D9Q6ZT07 1266 aa20.44■□□□□ 0.86
TRAPPC1-201ENST00000303731 SH3BP5LQ7L8J4 393 aa20.44■□□□□ 0.86
TRAPPC1-201ENST00000303731 ERC1Q8IUD2 1116 aa20.44■□□□□ 0.86
TRAPPC1-201ENST00000303731 ZNF384Q8TF68 577 aa20.44■□□□□ 0.86
TRAPPC1-201ENST00000303731 DDX4Q9NQI0 724 aaKnown RBP20.44■□□□□ 0.86
TRAPPC1-201ENST00000303731 DOCK1Q14185 1865 aa20.43■□□□□ 0.86
TRAPPC1-201ENST00000303731 DDTLA6NHG4 134 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC1-201ENST00000303731 TNRC18O15417 2968 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC1-201ENST00000303731 CTNND1O60716 968 aaKnown RBP20.43■□□□□ 0.86
TRAPPC1-201ENST00000303731 BAG3O95817 575 aa20.43■□□□□ 0.86
TRAPPC1-201ENST00000303731 PLCG2P16885 1265 aa20.43■□□□□ 0.86
TRAPPC1-201ENST00000303731 DBNDD2Q9BQY9 259 aa20.43■□□□□ 0.86
TRAPPC1-201ENST00000303731 CEP85Q6P2H3 762 aa20.42■□□□□ 0.86
TRAPPC1-201ENST00000303731 FASTKD5Q7L8L6 764 aaKnown RBP20.42■□□□□ 0.86
TRAPPC1-201ENST00000303731 PDHXO00330 501 aa20.41■□□□□ 0.86
TRAPPC1-201ENST00000303731 PTPRAP18433 802 aa20.41■□□□□ 0.86
TRAPPC1-201ENST00000303731 PRMT2P55345 433 aa20.41■□□□□ 0.86
TRAPPC1-201ENST00000303731 LACTBP83111 547 aaPredicted RBP20.41■□□□□ 0.86
TRAPPC1-201ENST00000303731 HSP90AB4PQ58FF6 505 aa20.41■□□□□ 0.86
TRAPPC1-201ENST00000303731 NAA16Q6N069 864 aaPredicted RBP20.41■□□□□ 0.86
TRAPPC1-201ENST00000303731 ARMC5Q96C12 935 aa20.41■□□□□ 0.86
TRAPPC1-201ENST00000303731 PARK7Q99497 189 aaKnown RBP20.41■□□□□ 0.86
TRAPPC1-201ENST00000303731 RBBP6Q7Z6E9 1792 aaKnown RBP20.41■□□□□ 0.86
TRAPPC1-201ENST00000303731 TMED8Q6PL24 325 aaPredicted RBP20.4■□□□□ 0.86
TRAPPC1-201ENST00000303731 NBPF11Q86T75 865 aa20.4■□□□□ 0.86
TRAPPC1-201ENST00000303731 TEX11Q8IYF3 940 aa20.4■□□□□ 0.86
TRAPPC1-201ENST00000303731 TBC1D2Q9BYX2 928 aa20.4■□□□□ 0.86
TRAPPC1-201ENST00000303731 OSBPL5Q9H0X9 879 aaPredicted RBP20.4■□□□□ 0.86
TRAPPC1-201ENST00000303731 CHMP4BQ9H444 224 aaKnown RBP20.4■□□□□ 0.86
TRAPPC1-201ENST00000303731 ZHX2Q9Y6X8 837 aa20.4■□□□□ 0.86
TRAPPC1-201ENST00000303731 CENPFP49454 3210 aa20.4■□□□□ 0.86
TRAPPC1-201ENST00000303731 A0A0G2JLL6 359 aaPredicted RBP20.39■□□□□ 0.85
TRAPPC1-201ENST00000303731 MOGSQ13724 837 aa20.39■□□□□ 0.85
TRAPPC1-201ENST00000303731 C17orf99Q6UX52 265 aa20.39■□□□□ 0.85
TRAPPC1-201ENST00000303731 PRRT2Q7Z6L0 340 aaPredicted RBP20.39■□□□□ 0.85
TRAPPC1-201ENST00000303731 CERS3Q8IU89 383 aa20.39■□□□□ 0.85
TRAPPC1-201ENST00000303731 PANK1Q8TE04 598 aa20.39■□□□□ 0.85
TRAPPC1-201ENST00000303731 DHX36Q9H2U1 1008 aaKnown RBP20.39■□□□□ 0.85
TRAPPC1-201ENST00000303731 SNRKQ9NRH2 765 aa20.39■□□□□ 0.85
TRAPPC1-201ENST00000303731 HERC5Q9UII4 1024 aaKnown RBP20.39■□□□□ 0.85
TRAPPC1-201ENST00000303731 DBNLQ9UJU6 430 aaKnown RBP20.39■□□□□ 0.85
TRAPPC1-201ENST00000303731 SLC45A1Q9Y2W3 748 aa20.39■□□□□ 0.85
TRAPPC1-201ENST00000303731 KIAA0100Q14667 2235 aaKnown RBP20.38■□□□□ 0.85
TRAPPC1-201ENST00000303731 PTPRFP10586 1907 aa20.38■□□□□ 0.85
TRAPPC1-201ENST00000303731 CYP2E1P05181 493 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC1-201ENST00000303731 PPP4CP60510 307 aa20.38■□□□□ 0.85
TRAPPC1-201ENST00000303731 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.38■□□□□ 0.85
TRAPPC1-201ENST00000303731 DDX19BQ9UMR2 479 aa20.38■□□□□ 0.85
TRAPPC1-201ENST00000303731 AFG3L2Q9Y4W6 797 aa20.38■□□□□ 0.85
TRAPPC1-201ENST00000303731 PHIPQ8WWQ0 1821 aa20.38■□□□□ 0.85
TRAPPC1-201ENST00000303731 FOCADQ5VW36 1801 aa20.37■□□□□ 0.85
TRAPPC1-201ENST00000303731 ADGRA2Q96PE1 1338 aa20.37■□□□□ 0.85
TRAPPC1-201ENST00000303731 SLC9C1Q4G0N8 1177 aa20.37■□□□□ 0.85
TRAPPC1-201ENST00000303731 RPAP2Q8IXW5 612 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC1-201ENST00000303731 EAF2Q96CJ1 260 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC1-201ENST00000303731 HMMRO75330 724 aa20.36■□□□□ 0.85
TRAPPC1-201ENST00000303731 HOXD10P28358 340 aa20.36■□□□□ 0.85
TRAPPC1-201ENST00000303731 CAP1Q01518 475 aa20.36■□□□□ 0.85
TRAPPC1-201ENST00000303731 SH3RF3Q8TEJ3 882 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC1-201ENST00000303731 AATFQ9NY61 560 aaKnown RBP eCLIP20.36■□□□□ 0.85
TRAPPC1-201ENST00000303731 PI4KBQ9UBF8 816 aa20.36■□□□□ 0.85
TRAPPC1-201ENST00000303731 MYO5AQ9Y4I1 1855 aaKnown RBP20.35■□□□□ 0.85
TRAPPC1-201ENST00000303731 ATAD5Q96QE3 1844 aa20.35■□□□□ 0.85
TRAPPC1-201ENST00000303731 ZAP70P43403 619 aa20.35■□□□□ 0.85
TRAPPC1-201ENST00000303731 GPAT2Q6NUI2 795 aa20.35■□□□□ 0.85
TRAPPC1-201ENST00000303731 CCDC8Q9H0W5 538 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms