RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 LGR6Q9HBX8 967 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 GPCPD1Q9NPB8 672 aa15.64■□□□□ 0.09
PRKCB-201ENST00000303531 CYP26C1Q6V0L0 522 aa15.64■□□□□ 0.09
PRKCB-201ENST00000303531 KBTBD3Q8NAB2 608 aa15.64■□□□□ 0.09
PRKCB-201ENST00000303531 UBLCP1Q8WVY7 318 aaPredicted RBP15.64■□□□□ 0.09
PRKCB-201ENST00000303531 FRMD4BQ9Y2L6 1034 aa15.64■□□□□ 0.09
PRKCB-201ENST00000303531 PABPN1LA6NDY0 278 aaKnown RBP15.64■□□□□ 0.09
PRKCB-201ENST00000303531 CCNT1O60563 726 aaKnown RBP15.64■□□□□ 0.09
PRKCB-201ENST00000303531 ZNF202O95125 648 aa15.64■□□□□ 0.09
PRKCB-201ENST00000303531 RIOK3O14730 519 aaKnown RBP15.64■□□□□ 0.09
PRKCB-201ENST00000303531 CNNM4Q6P4Q7 775 aa15.64■□□□□ 0.09
PRKCB-201ENST00000303531 TTC16Q8NEE8 873 aa15.64■□□□□ 0.09
PRKCB-201ENST00000303531 EPB41P11171 864 aaKnown RBP15.63■□□□□ 0.09
PRKCB-201ENST00000303531 CCDC114Q96M63 670 aa15.63■□□□□ 0.09
PRKCB-201ENST00000303531 MTUS1Q9ULD2 1270 aa15.63■□□□□ 0.09
PRKCB-201ENST00000303531 TTF2Q9UNY4 1162 aaKnown RBP15.63■□□□□ 0.09
PRKCB-201ENST00000303531 PRDM1O75626 825 aa15.63■□□□□ 0.09
PRKCB-201ENST00000303531 CALCOCO2Q13137 446 aa15.63■□□□□ 0.09
PRKCB-201ENST00000303531 LMBRD1Q9NUN5 540 aa15.63■□□□□ 0.09
PRKCB-201ENST00000303531 LRRC45Q96CN5 670 aa15.63■□□□□ 0.09
PRKCB-201ENST00000303531 KCNK9Q9NPC2 374 aa15.63■□□□□ 0.09
PRKCB-201ENST00000303531 MRPL12P52815 198 aaKnown RBP15.63■□□□□ 0.09
PRKCB-201ENST00000303531 MYL10Q9BUA6 226 aa15.63■□□□□ 0.09
PRKCB-201ENST00000303531 GTF2A1P52655 376 aaPredicted RBP15.63■□□□□ 0.09
PRKCB-201ENST00000303531 SP4Q02446 784 aa15.63■□□□□ 0.09
PRKCB-201ENST00000303531 CSGALNACT2Q8N6G5 542 aa15.63■□□□□ 0.09
PRKCB-201ENST00000303531 CEP83Q9Y592 693 aa15.63■□□□□ 0.09
PRKCB-201ENST00000303531 NLRP12P59046 1061 aa15.62■□□□□ 0.09
PRKCB-201ENST00000303531 SEL1L2Q5TEA6 688 aa15.62■□□□□ 0.09
PRKCB-201ENST00000303531 UBE2Q2Q8WVN8 375 aa15.62■□□□□ 0.09
PRKCB-201ENST00000303531 DNMT1P26358 1616 aaKnown RBP15.62■□□□□ 0.09
PRKCB-201ENST00000303531 TTC38Q5R3I4 469 aa15.62■□□□□ 0.09
PRKCB-201ENST00000303531 PHKBQ93100 1093 aa15.62■□□□□ 0.09
PRKCB-201ENST00000303531 PKD2L1Q9P0L9 805 aa15.62■□□□□ 0.09
PRKCB-201ENST00000303531 SH3TC1Q8TE82 1336 aa15.62■□□□□ 0.09
PRKCB-201ENST00000303531 PPM1FP49593 454 aaPredicted RBP15.62■□□□□ 0.09
PRKCB-201ENST00000303531 PAK1Q13153 545 aa15.62■□□□□ 0.09
PRKCB-201ENST00000303531 PDE8AO60658 829 aa15.62■□□□□ 0.09
PRKCB-201ENST00000303531 MLKLQ8NB16 471 aa15.62■□□□□ 0.09
PRKCB-201ENST00000303531 JAK2O60674 1132 aa15.62■□□□□ 0.09
PRKCB-201ENST00000303531 HIBADHP31937 336 aaKnown RBP15.62■□□□□ 0.09
PRKCB-201ENST00000303531 CTDSPL2Q05D32 466 aa15.62■□□□□ 0.09
PRKCB-201ENST00000303531 FMNL3Q8IVF7 1028 aa15.62■□□□□ 0.09
PRKCB-201ENST00000303531 SMC6Q96SB8 1091 aa15.62■□□□□ 0.09
PRKCB-201ENST00000303531 MAST1Q9Y2H9 1570 aa15.61■□□□□ 0.09
PRKCB-201ENST00000303531 RBM26Q5T8P6 1007 aaKnown RBP15.61■□□□□ 0.09
PRKCB-201ENST00000303531 EYA3Q99504 573 aa15.61■□□□□ 0.09
PRKCB-201ENST00000303531 BLMP54132 1417 aaPredicted RBP15.61■□□□□ 0.09
PRKCB-201ENST00000303531 CCDC26Q8TAB7 109 aa15.61■□□□□ 0.09
PRKCB-201ENST00000303531 SSX2IPQ9Y2D8 614 aa15.61■□□□□ 0.09
PRKCB-201ENST00000303531 BACH1O14867 736 aa15.61■□□□□ 0.09
PRKCB-201ENST00000303531 ARL1P40616 181 aaPredicted RBP15.61■□□□□ 0.09
PRKCB-201ENST00000303531 EIF6P56537 245 aaKnown RBP15.61■□□□□ 0.09
PRKCB-201ENST00000303531 CEP57Q86XR8 500 aa15.61■□□□□ 0.09
PRKCB-201ENST00000303531 SAMD15Q9P1V8 674 aa15.61■□□□□ 0.09
PRKCB-201ENST00000303531 TXKP42681 527 aa15.61■□□□□ 0.09
PRKCB-201ENST00000303531 CARD6Q9BX69 1037 aa15.61■□□□□ 0.09
PRKCB-201ENST00000303531 GNPATO15228 680 aa15.61■□□□□ 0.09
PRKCB-201ENST00000303531 JAKMIP2Q96AA8 810 aa15.61■□□□□ 0.09
PRKCB-201ENST00000303531 VWA3BQ502W6 1294 aa15.61■□□□□ 0.09
PRKCB-201ENST00000303531 PARP10Q53GL7 1025 aa15.61■□□□□ 0.09
PRKCB-201ENST00000303531 MSANTD4Q8NCY6 345 aa15.61■□□□□ 0.09
PRKCB-201ENST00000303531 IMPACTQ9P2X3 320 aa15.61■□□□□ 0.09
PRKCB-201ENST00000303531 GCKRQ14397 625 aa15.6■□□□□ 0.09
PRKCB-201ENST00000303531 KRT40Q6A162 431 aa15.6■□□□□ 0.09
PRKCB-201ENST00000303531 TFCP2L1Q9NZI6 479 aa15.6■□□□□ 0.09
PRKCB-201ENST00000303531 PARP3Q9Y6F1 533 aa15.6■□□□□ 0.09
PRKCB-201ENST00000303531 SLC52A2Q9HAB3 445 aa15.6■□□□□ 0.09
PRKCB-201ENST00000303531 CHMP2AO43633 222 aa15.6■□□□□ 0.09
PRKCB-201ENST00000303531 TAF5LO75529 589 aa15.6■□□□□ 0.09
PRKCB-201ENST00000303531 KRT5P13647 590 aa15.6■□□□□ 0.09
PRKCB-201ENST00000303531 C8orf74Q6P047 294 aa15.6■□□□□ 0.09
PRKCB-201ENST00000303531 B4DLN1 442 aa15.6■□□□□ 0.09
PRKCB-201ENST00000303531 NFE2L3Q9Y4A8 694 aa15.6■□□□□ 0.09
PRKCB-201ENST00000303531 ATP2A2P16615 1042 aaKnown RBP15.6■□□□□ 0.09
PRKCB-201ENST00000303531 RNASE9P60153 205 aaKnown RBP15.6■□□□□ 0.09
PRKCB-201ENST00000303531 RBM17Q96I25 401 aaKnown RBP15.6■□□□□ 0.09
PRKCB-201ENST00000303531 UFL1O94874 794 aa15.59■□□□□ 0.09
PRKCB-201ENST00000303531 A1BGP04217 495 aa15.59■□□□□ 0.09
PRKCB-201ENST00000303531 UTP14CQ5TAP6 766 aaKnown RBP15.59■□□□□ 0.09
PRKCB-201ENST00000303531 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.59■□□□□ 0.09
PRKCB-201ENST00000303531 ELF2Q15723 593 aa15.59■□□□□ 0.09
PRKCB-201ENST00000303531 POSTNQ15063 836 aa15.59■□□□□ 0.09
PRKCB-201ENST00000303531 FCHSD1Q86WN1 690 aa15.59■□□□□ 0.09
PRKCB-201ENST00000303531 BTG4Q9NY30 223 aa15.59■□□□□ 0.09
PRKCB-201ENST00000303531 NCBP1Q09161 790 aaKnown RBP15.59■□□□□ 0.09
PRKCB-201ENST00000303531 AATFQ9NY61 560 aaKnown RBP eCLIP15.59■□□□□ 0.09
PRKCB-201ENST00000303531 ZMYM3Q14202 1370 aa15.59■□□□□ 0.09
PRKCB-201ENST00000303531 TNFAIP3P21580 790 aa15.59■□□□□ 0.09
PRKCB-201ENST00000303531 SPOPO43791 374 aa15.59■□□□□ 0.09
PRKCB-201ENST00000303531 TUBB2AQ13885 445 aa15.59■□□□□ 0.09
PRKCB-201ENST00000303531 TTC31Q49AM3 519 aaPredicted RBP15.59■□□□□ 0.09
PRKCB-201ENST00000303531 HAUS3Q68CZ6 603 aa15.59■□□□□ 0.09
PRKCB-201ENST00000303531 SPATA24Q86W54 205 aa15.59■□□□□ 0.09
PRKCB-201ENST00000303531 TUBB2BQ9BVA1 445 aa15.59■□□□□ 0.09
PRKCB-201ENST00000303531 AFAP1L1Q8TED9 768 aa15.58■□□□□ 0.09
PRKCB-201ENST00000303531 WWC3Q9ULE0 1092 aa15.58■□□□□ 0.09
PRKCB-201ENST00000303531 HPDP32754 393 aaPredicted RBP15.58■□□□□ 0.09
PRKCB-201ENST00000303531 BIRC3Q13489 604 aa15.58■□□□□ 0.09
PRKCB-201ENST00000303531 ASIC2Q16515 512 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms