RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 USTQ9Y2C2 406 aa11.57□□□□□ -0.56
CLIP1-201ENST00000302528 ZKSCAN5Q9Y2L8 839 aa11.57□□□□□ -0.56
CLIP1-201ENST00000302528 KIAA0586Q9BVV6 1533 aa11.57□□□□□ -0.56
CLIP1-201ENST00000302528 SYNJ2O15056 1496 aa11.57□□□□□ -0.56
CLIP1-201ENST00000302528 ASIC2Q16515 512 aa11.57□□□□□ -0.56
CLIP1-201ENST00000302528 MAP3K21Q5TCX8 1036 aa11.57□□□□□ -0.56
CLIP1-201ENST00000302528 RUFY4Q6ZNE9 571 aa11.57□□□□□ -0.56
CLIP1-201ENST00000302528 IFT20Q8IY31 132 aa11.57□□□□□ -0.56
CLIP1-201ENST00000302528 RHPN1Q8TCX5 695 aa11.57□□□□□ -0.56
CLIP1-201ENST00000302528 OGFRQ9NZT2 677 aa11.57□□□□□ -0.56
CLIP1-201ENST00000302528 GINS2Q9Y248 185 aa11.57□□□□□ -0.56
CLIP1-201ENST00000302528 PLCG2P16885 1265 aa11.56□□□□□ -0.56
CLIP1-201ENST00000302528 SKAP1Q86WV1 359 aa11.56□□□□□ -0.56
CLIP1-201ENST00000302528 ATP2A3Q93084 1043 aa11.56□□□□□ -0.56
CLIP1-201ENST00000302528 DCUN1D2Q6PH85 259 aa11.56□□□□□ -0.56
CLIP1-201ENST00000302528 NAPGQ99747 312 aaPredicted RBP11.56□□□□□ -0.56
CLIP1-201ENST00000302528 BAG5Q9UL15 447 aa11.56□□□□□ -0.56
CLIP1-201ENST00000302528 ESYT2A0FGR8 921 aa11.56□□□□□ -0.56
CLIP1-201ENST00000302528 A6NNZ2 444 aa11.56□□□□□ -0.56
CLIP1-201ENST00000302528 U2AF2P26368 475 aaKnown RBP eCLIP11.56□□□□□ -0.561e-6■■■■□ 26
CLIP1-201ENST00000302528 CDR2Q01850 454 aa11.56□□□□□ -0.56
CLIP1-201ENST00000302528 TUBB8Q3ZCM7 444 aa11.56□□□□□ -0.56
CLIP1-201ENST00000302528 C20orf194Q5TEA3 1177 aa11.56□□□□□ -0.56
CLIP1-201ENST00000302528 PDCD7Q8N8D1 485 aaKnown RBP11.56□□□□□ -0.56
CLIP1-201ENST00000302528 SPDYE16A6NNV3 312 aaPredicted RBP11.56□□□□□ -0.56
CLIP1-201ENST00000302528 PPP1R2P41236 205 aa11.56□□□□□ -0.56
CLIP1-201ENST00000302528 TBC1D8BQ0IIM8 1120 aa11.56□□□□□ -0.56
CLIP1-201ENST00000302528 SPDYE2Q495Y8 402 aa11.56□□□□□ -0.56
CLIP1-201ENST00000302528 RIOK1Q9BRS2 568 aaKnown RBP11.56□□□□□ -0.56
CLIP1-201ENST00000302528 EXOC7Q9UPT5 735 aa11.56□□□□□ -0.56
CLIP1-201ENST00000302528 SNRPA1P09661 255 aaKnown RBP11.55□□□□□ -0.56
CLIP1-201ENST00000302528 WHAMMP3Q1A5X7 153 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 FAM71BQ8TC56 605 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 JDP2Q8WYK2 163 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 CTNND2Q9UQB3 1225 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 GNAT2P19087 354 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 ARHGAP25P42331 645 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 IRX4P78413 519 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 ANKRD13DQ6ZTN6 518 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 RABEP2Q9H5N1 569 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 IFT140Q96RY7 1462 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 CHMP2AO43633 222 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 TRIM27P14373 513 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 CTTNBP2NLQ9P2B4 639 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 NKTRP30414 1462 aaKnown RBP11.55□□□□□ -0.56
CLIP1-201ENST00000302528 PLEKHH2Q8IVE3 1493 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 ATP6V1E1P36543 226 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 COG7P83436 770 aa11.55□□□□□ -0.56
CLIP1-201ENST00000302528 CALUO43852 315 aaPredicted RBP11.55□□□□□ -0.56
CLIP1-201ENST00000302528 ZC3H12CQ9C0D7 883 aaKnown RBP11.55□□□□□ -0.56
CLIP1-201ENST00000302528 ARHGAP42A6NI28 874 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 BSPRYQ5W0U4 402 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 NME9Q86XW9 330 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 RBSNQ9H1K0 784 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 MX2P20592 715 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 PPARDQ03181 441 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 CCDC93Q567U6 631 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 VPS37BQ9H9H4 285 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 CLCN1P35523 988 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 RASSF2P50749 326 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 DBN1Q16643 649 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 MUM1Q2TAK8 710 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 LETM2Q2VYF4 491 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 PHLDB3Q6NSJ2 640 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 SH2D4AQ9H788 454 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 VWA3AA6NCI4 1184 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 XRCC6P12956 609 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLIP1-201ENST00000302528 PDE4DQ08499 809 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 TRIM14Q14142 442 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 NXNQ6DKJ4 435 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 JADE1Q6IE81 842 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 PDZD8Q8NEN9 1154 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 PHF8Q9UPP1 1060 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 FOXO3O43524 673 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 PARP1P09874 1014 aaKnown RBP11.54□□□□□ -0.56
CLIP1-201ENST00000302528 PHEXP78562 749 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 MYL5Q02045 173 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 SF3A3Q12874 501 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLIP1-201ENST00000302528 PPP4R1Q8TF05 950 aa11.54□□□□□ -0.56
CLIP1-201ENST00000302528 SNAPC4Q5SXM2 1469 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 OPHN1O60890 802 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 PLCD1P51178 756 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 SLC9C1Q4G0N8 1177 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 SPOUT1Q5T280 376 aaKnown RBP11.53□□□□□ -0.56
CLIP1-201ENST00000302528 BRAPQ7Z569 592 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 IGSF22Q8N9C0 903 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 SDCCAG3Q96C92 435 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 PLCB1Q9NQ66 1216 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 EMILIN1Q9Y6C2 1016 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 NOP56O00567 594 aaKnown RBP11.53□□□□□ -0.56
CLIP1-201ENST00000302528 CEP104O60308 925 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 TBC1D8O95759 1140 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 CDAN1Q8IWY9 1227 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 CCDC105Q8IYK2 499 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 POGZQ7Z3K3 1410 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 TROVE2P10155 538 aaKnown RBP eCLIP11.53□□□□□ -0.56
CLIP1-201ENST00000302528 CD19P15391 556 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 CYP26C1Q6V0L0 522 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 KLHL7Q8IXQ5 586 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 VPS16Q9H269 839 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms