RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 WWC3Q9ULE0 1092 aa13.85□□□□□ -0.19
CLPB-201ENST00000294053 WTIPA6NIX2 430 aaPredicted RBP13.84□□□□□ -0.19
CLPB-201ENST00000294053 DHX16O60231 1041 aaKnown RBP13.84□□□□□ -0.19
CLPB-201ENST00000294053 CASQ1P31415 396 aa13.84□□□□□ -0.19
CLPB-201ENST00000294053 ANTXR2P58335 489 aa13.84□□□□□ -0.19
CLPB-201ENST00000294053 NBPF11Q86T75 865 aa13.84□□□□□ -0.19
CLPB-201ENST00000294053 PLA2G12BQ9BX93 195 aa13.84□□□□□ -0.19
CLPB-201ENST00000294053 SENP2Q9HC62 589 aa13.84□□□□□ -0.19
CLPB-201ENST00000294053 NUP98P52948 1817 aa13.84□□□□□ -0.19
CLPB-201ENST00000294053 ANKRD18BA2A2Z9 1011 aa13.84□□□□□ -0.19
CLPB-201ENST00000294053 TEX13AQ9BXU3 409 aaPredicted RBP13.84□□□□□ -0.19
CLPB-201ENST00000294053 AGXT2Q9BYV1 514 aa13.84□□□□□ -0.19
CLPB-201ENST00000294053 RABEP2Q9H5N1 569 aa13.84□□□□□ -0.19
CLPB-201ENST00000294053 DISP2A7MBM2 1401 aa13.83□□□□□ -0.19
CLPB-201ENST00000294053 CAVIN2O95810 425 aa13.83□□□□□ -0.19
CLPB-201ENST00000294053 HMGB1P09429 215 aaKnown RBP13.83□□□□□ -0.2
CLPB-201ENST00000294053 UBASH3AP57075 661 aa13.83□□□□□ -0.2
CLPB-201ENST00000294053 SUSD4Q5VX71 490 aa13.83□□□□□ -0.2
CLPB-201ENST00000294053 CCDC102BQ68D86 513 aa13.83□□□□□ -0.2
CLPB-201ENST00000294053 FOXR1Q6PIV2 292 aa13.83□□□□□ -0.2
CLPB-201ENST00000294053 SARM1Q6SZW1 724 aa13.83□□□□□ -0.2
CLPB-201ENST00000294053 APPBP2Q92624 585 aa13.83□□□□□ -0.2
CLPB-201ENST00000294053 DESI2Q9BSY9 194 aa13.83□□□□□ -0.2
CLPB-201ENST00000294053 PHLPP1O60346 1717 aa13.83□□□□□ -0.2
CLPB-201ENST00000294053 CTAGE5O15320 804 aa13.83□□□□□ -0.2
CLPB-201ENST00000294053 PRC1O43663 620 aa13.83□□□□□ -0.2
CLPB-201ENST00000294053 APPP05067 770 aa13.83□□□□□ -0.2
CLPB-201ENST00000294053 CREBRFQ8IUR6 639 aa13.83□□□□□ -0.2
CLPB-201ENST00000294053 CCDC150Q8NCX0 1101 aa13.83□□□□□ -0.2
CLPB-201ENST00000294053 PARD6BQ9BYG5 372 aa13.83□□□□□ -0.2
CLPB-201ENST00000294053 KLF18A0A0U1RQI7 1052 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 PDE8BO95263 885 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 SLC3A2P08195 630 aaKnown RBP13.82□□□□□ -0.2
CLPB-201ENST00000294053 NDUFA8P51970 172 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 FAM160A1Q05DH4 1040 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 TBC1D10CQ8IV04 446 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 AIFM3Q96NN9 605 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 L2HGDHQ9H9P8 463 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 PDE11AQ9HCR9 933 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 FAM53CQ9NYF3 392 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 IQSEC3Q9UPP2 1182 aaPredicted RBP13.82□□□□□ -0.2
CLPB-201ENST00000294053 SALL1Q9NSC2 1324 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 LRP6O75581 1613 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 NUTM2BA6NNL0 878 aaPredicted RBP13.82□□□□□ -0.2
CLPB-201ENST00000294053 NUTM2EB1AL46 878 aaPredicted RBP13.82□□□□□ -0.2
CLPB-201ENST00000294053 UBE2Q2LH0YL09 131 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 TBC1D8O95759 1140 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 MARCKSP29966 332 aaPredicted RBP13.82□□□□□ -0.2
CLPB-201ENST00000294053 PPP2R3AQ06190 1150 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 IMMTQ16891 758 aaKnown RBP13.82□□□□□ -0.2
CLPB-201ENST00000294053 CC2D1AQ6P1N0 951 aaPredicted RBP13.82□□□□□ -0.2
CLPB-201ENST00000294053 NUTM2AQ8IVF1 878 aaPredicted RBP13.82□□□□□ -0.2
CLPB-201ENST00000294053 CCDC12Q8WUD4 166 aaPredicted RBP13.82□□□□□ -0.2
CLPB-201ENST00000294053 CPLX3Q8WVH0 158 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 CARMIL3Q8ND23 1372 aa13.82□□□□□ -0.2
CLPB-201ENST00000294053 RHOXF2BP0C7M4 288 aa13.81□□□□□ -0.2
CLPB-201ENST00000294053 FANCCQ00597 558 aa13.81□□□□□ -0.2
CLPB-201ENST00000294053 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.81□□□□□ -0.2
CLPB-201ENST00000294053 RHOXF2Q9BQY4 288 aa13.81□□□□□ -0.2
CLPB-201ENST00000294053 SUGCTQ9HAC7 445 aa13.81□□□□□ -0.2
CLPB-201ENST00000294053 LZTFL1Q9NQ48 299 aa13.81□□□□□ -0.2
CLPB-201ENST00000294053 HPS5Q9UPZ3 1129 aa13.81□□□□□ -0.2
CLPB-201ENST00000294053 ZNF532Q9HCE3 1301 aa13.81□□□□□ -0.2
CLPB-201ENST00000294053 MYH3P11055 1940 aa13.81□□□□□ -0.2
CLPB-201ENST00000294053 GOLGA8BA8MQT2 603 aa13.81□□□□□ -0.2
CLPB-201ENST00000294053 KCNQ2O43526 872 aa13.81□□□□□ -0.2
CLPB-201ENST00000294053 TOP1P11387 765 aaKnown RBP13.81□□□□□ -0.2
CLPB-201ENST00000294053 SLC20A2Q08357 652 aa13.81□□□□□ -0.2
CLPB-201ENST00000294053 MB21D2Q8IYB1 491 aaPredicted RBP13.81□□□□□ -0.2
CLPB-201ENST00000294053 WDR24Q96S15 920 aa13.81□□□□□ -0.2
CLPB-201ENST00000294053 IRX2Q9BZI1 471 aaPredicted RBP13.81□□□□□ -0.2
CLPB-201ENST00000294053 CDHR2Q9BYE9 1310 aa13.81□□□□□ -0.2
CLPB-201ENST00000294053 IBSPP21815 317 aaPredicted RBP13.81□□□□□ -0.2
CLPB-201ENST00000294053 ADD2P35612 726 aa13.81□□□□□ -0.2
CLPB-201ENST00000294053 ATP6V1AP38606 617 aa13.81□□□□□ -0.2
CLPB-201ENST00000294053 LRRFIP1Q32MZ4 808 aaKnown RBP13.81□□□□□ -0.2
CLPB-201ENST00000294053 RBM43Q6ZSC3 357 aaKnown RBP13.81□□□□□ -0.2
CLPB-201ENST00000294053 MYH7P12883 1935 aa13.8□□□□□ -0.2
CLPB-201ENST00000294053 ZNF213O14771 459 aa13.8□□□□□ -0.2
CLPB-201ENST00000294053 PDE8AO60658 829 aa13.8□□□□□ -0.2
CLPB-201ENST00000294053 N4BP1O75113 896 aaKnown RBP13.8□□□□□ -0.2
CLPB-201ENST00000294053 ZRANB2O95218 330 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLPB-201ENST00000294053 ITPK1Q13572 414 aa13.8□□□□□ -0.2
CLPB-201ENST00000294053 NOM1Q5C9Z4 860 aaKnown RBP13.8□□□□□ -0.2
CLPB-201ENST00000294053 INTS5Q6P9B9 1019 aaKnown RBP13.8□□□□□ -0.2
CLPB-201ENST00000294053 CYB5R4Q7L1T6 521 aa13.8□□□□□ -0.2
CLPB-201ENST00000294053 MRPS27Q92552 414 aaKnown RBP13.8□□□□□ -0.2
CLPB-201ENST00000294053 DPF2Q92785 391 aa13.8□□□□□ -0.2
CLPB-201ENST00000294053 ZNF396Q96N95 335 aaPredicted RBP13.8□□□□□ -0.2
CLPB-201ENST00000294053 MYL10Q9BUA6 226 aa13.8□□□□□ -0.2
CLPB-201ENST00000294053 COL14A1Q05707 1796 aaKnown RBP13.8□□□□□ -0.2
CLPB-201ENST00000294053 COL4A1P02462 1669 aa13.8□□□□□ -0.2
CLPB-201ENST00000294053 TADA3O75528 432 aa13.8□□□□□ -0.2
CLPB-201ENST00000294053 CRKLP46109 303 aaKnown RBP13.8□□□□□ -0.2
CLPB-201ENST00000294053 ADKP55263 362 aaKnown RBP13.8□□□□□ -0.2
CLPB-201ENST00000294053 ZSCAN16Q9H4T2 348 aaPredicted RBP13.8□□□□□ -0.2
CLPB-201ENST00000294053 PCDHA7Q9UN72 937 aa13.8□□□□□ -0.2
CLPB-201ENST00000294053 H3BQF6 201 aa13.79□□□□□ -0.2
CLPB-201ENST00000294053 TTC31Q49AM3 519 aaPredicted RBP13.79□□□□□ -0.2
CLPB-201ENST00000294053 DOT1LQ8TEK3 1739 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms