RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 PDE4DQ08499 809 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 IGSF22Q8N9C0 903 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 IQCDQ96DY2 449 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 LZTFL1Q9NQ48 299 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 CTNND2Q9UQB3 1225 aa14.37□□□□□ -0.11
PTCD1-201ENST00000292478 KARSQ15046 597 aaKnown RBP14.36□□□□□ -0.11
PTCD1-201ENST00000292478 ZNF594Q96JF6 807 aaPredicted RBP14.36□□□□□ -0.11
PTCD1-201ENST00000292478 ARHGEF10LQ9HCE6 1279 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 PIK3AP1Q6ZUJ8 805 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 LMBRD1Q9NUN5 540 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 CEP83Q9Y592 693 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 ABCA8O94911 1581 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 RIMBP2O15034 1052 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 CCT6AP40227 531 aaKnown RBP14.36□□□□□ -0.11
PTCD1-201ENST00000292478 CALUO43852 315 aaPredicted RBP14.36□□□□□ -0.11
PTCD1-201ENST00000292478 DKC1O60832 514 aaKnown RBP eCLIP14.36□□□□□ -0.11
PTCD1-201ENST00000292478 FANCCQ00597 558 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 TBC1D8BQ0IIM8 1120 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 CCDC122Q5T0U0 273 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 KRT40Q6A162 431 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 NAP1L3Q99457 506 aaPredicted RBP14.36□□□□□ -0.11
PTCD1-201ENST00000292478 TCHPQ9BT92 498 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 USP44Q9H0E7 712 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 MTRF1LQ9UGC7 380 aaKnown RBP14.36□□□□□ -0.11
PTCD1-201ENST00000292478 MTUS1Q9ULD2 1270 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 KDM5CP41229 1560 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 E7EWF7 191 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 ZNF202O95125 648 aa14.36□□□□□ -0.11
PTCD1-201ENST00000292478 NONOQ15233 471 aaKnown RBP eCLIP14.36□□□□□ -0.11
PTCD1-201ENST00000292478 TRAF5O00463 557 aa14.35□□□□□ -0.11
PTCD1-201ENST00000292478 PAK1Q13153 545 aa14.35□□□□□ -0.11
PTCD1-201ENST00000292478 TBC1D22AQ8WUA7 517 aa14.35□□□□□ -0.11
PTCD1-201ENST00000292478 TIGD1Q96MW7 591 aa14.35□□□□□ -0.11
PTCD1-201ENST00000292478 SYNRGQ9UMZ2 1314 aa14.35□□□□□ -0.11
PTCD1-201ENST00000292478 LMTK3Q96Q04 1460 aa14.35□□□□□ -0.11
PTCD1-201ENST00000292478 POLD1P28340 1107 aa14.35□□□□□ -0.11
PTCD1-201ENST00000292478 ARID5AQ03989 594 aa14.35□□□□□ -0.11
PTCD1-201ENST00000292478 APBB1IPQ7Z5R6 666 aaPredicted RBP14.35□□□□□ -0.11
PTCD1-201ENST00000292478 GTF3C6Q969F1 213 aa14.35□□□□□ -0.11
PTCD1-201ENST00000292478 CBX8Q9HC52 389 aa14.35□□□□□ -0.11
PTCD1-201ENST00000292478 RNF216Q9NWF9 866 aaPredicted RBP14.35□□□□□ -0.11
PTCD1-201ENST00000292478 ZNF532Q9HCE3 1301 aa14.35□□□□□ -0.11
PTCD1-201ENST00000292478 PLEKHF1Q96S99 279 aa14.35□□□□□ -0.11
PTCD1-201ENST00000292478 IQCGQ9H095 443 aaKnown RBP14.35□□□□□ -0.11
PTCD1-201ENST00000292478 ZAP70P43403 619 aa14.35□□□□□ -0.11
PTCD1-201ENST00000292478 HDXQ7Z353 690 aa14.35□□□□□ -0.11
PTCD1-201ENST00000292478 PPP1R14CQ8TAE6 165 aa14.35□□□□□ -0.11
PTCD1-201ENST00000292478 CCDC94Q9BW85 323 aaPredicted RBP14.35□□□□□ -0.11
PTCD1-201ENST00000292478 NCOA5Q9HCD5 579 aaKnown RBP14.35□□□□□ -0.11
PTCD1-201ENST00000292478 JAKMIP2Q96AA8 810 aa14.34□□□□□ -0.11
PTCD1-201ENST00000292478 MAGI2Q86UL8 1455 aa14.34□□□□□ -0.11
PTCD1-201ENST00000292478 CEP128Q6ZU80 1094 aa14.34□□□□□ -0.11
PTCD1-201ENST00000292478 DNAJC10Q8IXB1 793 aa14.34□□□□□ -0.11
PTCD1-201ENST00000292478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.34□□□□□ -0.11
PTCD1-201ENST00000292478 ARPP21Q9UBL0 812 aaPredicted RBP14.34□□□□□ -0.11
PTCD1-201ENST00000292478 POLR2DO15514 142 aaKnown RBP14.34□□□□□ -0.11
PTCD1-201ENST00000292478 PHKG2P15735 406 aa14.34□□□□□ -0.11
PTCD1-201ENST00000292478 TMTC1Q8IUR5 882 aa14.34□□□□□ -0.11
PTCD1-201ENST00000292478 KIFAP3Q92845 792 aa14.34□□□□□ -0.11
PTCD1-201ENST00000292478 ERVK-7P63135 1459 aa14.34□□□□□ -0.11
PTCD1-201ENST00000292478 AKNAD1Q5T1N1 836 aa14.34□□□□□ -0.11
PTCD1-201ENST00000292478 IL17REQ8NFR9 667 aa14.34□□□□□ -0.11
PTCD1-201ENST00000292478 NAPGQ99747 312 aaPredicted RBP14.34□□□□□ -0.11
PTCD1-201ENST00000292478 OGFRQ9NZT2 677 aa14.34□□□□□ -0.11
PTCD1-201ENST00000292478 SAP30BPQ9UHR5 308 aaKnown RBP14.34□□□□□ -0.11
PTCD1-201ENST00000292478 FERP16591 822 aa14.33□□□□□ -0.11
PTCD1-201ENST00000292478 BEND3Q5T5X7 828 aa14.33□□□□□ -0.11
PTCD1-201ENST00000292478 CCDC26Q8TAB7 109 aa14.33□□□□□ -0.11
PTCD1-201ENST00000292478 CCNT1O60563 726 aaKnown RBP14.33□□□□□ -0.12
PTCD1-201ENST00000292478 ADCY7P51828 1080 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 TERF1P54274 439 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 NBPF14Q5TI25 921 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 ANKS4BQ8N8V4 417 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 EXOC7Q9UPT5 735 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 TARBP1Q13395 1621 aaKnown RBP14.33□□□□□ -0.12
PTCD1-201ENST00000292478 SUPT20HQ8NEM7 779 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 GPCPD1Q9NPB8 672 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 CETN3O15182 167 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 SMTNP53814 917 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 CTSWP56202 376 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 GSTA5Q7RTV2 222 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 NBPF11Q86T75 865 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 STAP2Q9UGK3 403 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 PLEKHG1Q9ULL1 1385 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 GSPT1P15170 499 aaKnown RBP14.33□□□□□ -0.12
PTCD1-201ENST00000292478 POSTNQ15063 836 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 MCTP2Q6DN12 878 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 CDC37L1Q7L3B6 337 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 CSGALNACT2Q8N6G5 542 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 PLIN2Q99541 437 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 ZSWIM6Q9HCJ5 1215 aa14.33□□□□□ -0.12
PTCD1-201ENST00000292478 ARHGAP6O43182 974 aa14.32□□□□□ -0.12
PTCD1-201ENST00000292478 EEF2P13639 858 aaKnown RBP14.32□□□□□ -0.12
PTCD1-201ENST00000292478 SEL1L2Q5TEA6 688 aa14.32□□□□□ -0.12
PTCD1-201ENST00000292478 HOOK2Q96ED9 719 aa14.32□□□□□ -0.12
PTCD1-201ENST00000292478 CAPZA3Q96KX2 299 aa14.32□□□□□ -0.12
PTCD1-201ENST00000292478 HAUS7Q99871 368 aa14.32□□□□□ -0.12
PTCD1-201ENST00000292478 V9GYY5 206 aaPredicted RBP14.32□□□□□ -0.12
PTCD1-201ENST00000292478 PPP2R3AQ06190 1150 aa14.32□□□□□ -0.12
PTCD1-201ENST00000292478 ADALQ6DHV7 355 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms