RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 FMNL3Q8IVF7 1028 aa12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 REREQ9P2R6 1566 aa12.06□□□□□ -0.48
PKNOX1-201ENST00000291547 WDHD1O75717 1129 aaPredicted RBP12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 CEP85LQ5SZL2 805 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 IP6K1Q92551 441 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 LRRC59Q96AG4 307 aaKnown RBP12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 TCHPQ9BT92 498 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 PRR36Q9H6K5 1346 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 HSPA1LP34931 641 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 CERS3Q8IU89 383 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 GOLGA6CA6NDK9 693 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 AKR1B15C9JRZ8 316 aaPredicted RBP12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 CASQ2O14958 399 aaPredicted RBP12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 GMNNO75496 209 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 GOLGA6DP0CG33 693 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 CCDC26Q8TAB7 109 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 CRNKL1Q9BZJ0 848 aaKnown RBP12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 GOLGA6AQ9NYA3 693 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 SBNO1A3KN83 1393 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 HGSO14964 777 aaPredicted RBP12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 HLA-DOAP06340 250 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 MYL5Q02045 173 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 HS2ST1Q7LGA3 356 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 ZGPATQ8N5A5 531 aaKnown RBP12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 MEIS3Q99687 375 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 IL16Q14005 1332 aa12.05□□□□□ -0.48
PKNOX1-201ENST00000291547 GNAQP50148 359 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 TSNAXIP1Q2TAA8 658 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 KRT79Q5XKE5 535 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 GBP7Q8N8V2 638 aaPredicted RBP12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 NGLY1Q96IV0 654 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 CNNM2Q9H8M5 875 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 RIMS1Q86UR5 1692 aaKnown RBP12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 UQCRFS1P1P0C7P4 283 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 SETSIPP0DME0 302 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 VSIG1Q86XK7 387 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 LEO1Q8WVC0 666 aaPredicted RBP12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 JARID2Q92833 1246 aaPredicted RBP12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 CARD6Q9BX69 1037 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 MBIPQ9NS73 344 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 BCORL1Q5H9F3 1711 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 CLUL1Q15846 466 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 UAP1Q16222 522 aaPredicted RBP12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 CABS1Q96KC9 395 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 CDC5LQ99459 802 aaKnown RBP12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 FAM83GA6ND36 823 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 ERCC6LQ2NKX8 1250 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 MCMDC2Q4G0Z9 681 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 C8orf74Q6P047 294 aa12.04□□□□□ -0.48
PKNOX1-201ENST00000291547 ATP5DP30049 168 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 NAPAP54920 295 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 PSMD6Q15008 389 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 CCDC38Q502W7 563 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 SDCCAG8Q86SQ7 713 aaPredicted RBP12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 RPGRQ92834 1020 aaKnown RBP12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 EYA1Q99502 592 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 NAPGQ99747 312 aaPredicted RBP12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 TSPY3P0CV98 308 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 TSPY8P0CW00 308 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 TERF2Q15554 542 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 A6NNZ2 444 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 ANXA1P04083 346 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 AK2P54819 239 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 ELF2Q15723 593 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 TUBB8Q3ZCM7 444 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 GPR161Q8N6U8 529 aaKnown RBP12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 DDX17Q92841 729 aaKnown RBP12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 ARHGEF2Q92974 986 aaKnown RBP12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 NCAPGQ9BPX3 1015 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 SWAP70Q9UH65 585 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 PTPRMP28827 1452 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 FAM13AO94988 1023 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 ZNF853P0CG23 659 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 IL13P35225 146 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 SEL1L2Q5TEA6 688 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 GKAP1Q5VSY0 366 aaPredicted RBP12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 FYB2Q5VWT5 728 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 DPH6Q7L8W6 267 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 IFNL2Q8IZJ0 200 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 MCUR1Q96AQ8 359 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 TSGA10Q9BZW7 698 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 ODF2LQ9ULJ1 636 aa12.03□□□□□ -0.48
PKNOX1-201ENST00000291547 ARHGAP25P42331 645 aa12.02□□□□□ -0.48
PKNOX1-201ENST00000291547 RAPGEF1Q13905 1077 aa12.02□□□□□ -0.48
PKNOX1-201ENST00000291547 GBP1P32455 592 aa12.02□□□□□ -0.48
PKNOX1-201ENST00000291547 MCM7P33993 719 aa12.02□□□□□ -0.48
PKNOX1-201ENST00000291547 CCDC14Q49A88 953 aa12.02□□□□□ -0.48
PKNOX1-201ENST00000291547 IQUBQ8NA54 791 aa12.02□□□□□ -0.48
PKNOX1-201ENST00000291547 SLC4A4Q9Y6R1 1079 aa12.02□□□□□ -0.48
PKNOX1-201ENST00000291547 ARHGEF10O15013 1369 aa12.02□□□□□ -0.49
PKNOX1-201ENST00000291547 CYP7A1P22680 504 aa12.02□□□□□ -0.49
PKNOX1-201ENST00000291547 ANKRD44Q8N8A2 993 aa12.02□□□□□ -0.49
PKNOX1-201ENST00000291547 NUF2Q9BZD4 464 aa12.02□□□□□ -0.49
PKNOX1-201ENST00000291547 QRICH2Q9H0J4 1663 aa12.02□□□□□ -0.49
PKNOX1-201ENST00000291547 CCT6AP40227 531 aaKnown RBP12.02□□□□□ -0.49
PKNOX1-201ENST00000291547 ZNF131P52739 623 aa12.02□□□□□ -0.49
PKNOX1-201ENST00000291547 SNX16P57768 344 aa12.02□□□□□ -0.49
PKNOX1-201ENST00000291547 RNASE9P60153 205 aaKnown RBP12.02□□□□□ -0.49
PKNOX1-201ENST00000291547 TTLL12Q14166 644 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms