RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 IFNL3Q8IZI9 196 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 SH3RF3Q8TEJ3 882 aaPredicted RBP11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 TBC1D22AQ8WUA7 517 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 JAKMIP1Q96N16 626 aaKnown RBP11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 ARID3AQ99856 593 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 NBPF3Q9H094 633 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 TMEM63CQ9P1W3 806 aa11.42□□□□□ -0.58
LRTOMT-201ENST00000289488 CYP2D7A0A087X1C5 515 aa11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 PSMD14O00487 310 aa11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 ZBTB22O15209 634 aa11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 YBX3P16989 372 aaKnown RBP eCLIP11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 PRDM10Q9NQV6 1147 aa11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 U3KPZ7 1027 aaPredicted RBP11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 MROH7-TTC4A0A0A0MT08 1334 aa11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 SYCE3A1L190 88 aa11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 PATL2C9JE40 543 aaKnown RBP11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 EPB41L2O43491 1005 aaKnown RBP11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 MBD3O95983 291 aa11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 ZKSCAN1P17029 563 aaPredicted RBP11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 ANAPC15P60006 121 aa11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 GRIPAP1Q4V328 841 aa11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 KCNB2Q92953 911 aa11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 PSME4Q14997 1843 aa11.41□□□□□ -0.58
LRTOMT-201ENST00000289488 ZSCAN20P17040 1043 aaPredicted RBP11.4□□□□□ -0.58
LRTOMT-201ENST00000289488 BTDP43251 543 aa11.4□□□□□ -0.58
LRTOMT-201ENST00000289488 ARHGAP27Q6ZUM4 889 aa11.4□□□□□ -0.58
LRTOMT-201ENST00000289488 PRIMPOLQ96LW4 560 aa11.4□□□□□ -0.58
LRTOMT-201ENST00000289488 ZHX1Q9UKY1 873 aaPredicted RBP11.4□□□□□ -0.58
LRTOMT-201ENST00000289488 DAGLAQ9Y4D2 1042 aa11.4□□□□□ -0.58
LRTOMT-201ENST00000289488 TDO2P48775 406 aa11.4□□□□□ -0.59
LRTOMT-201ENST00000289488 CTDSPL2Q05D32 466 aa11.4□□□□□ -0.59
LRTOMT-201ENST00000289488 CXCL9Q07325 125 aa11.4□□□□□ -0.59
LRTOMT-201ENST00000289488 CHST3Q7LGC8 479 aa11.4□□□□□ -0.59
LRTOMT-201ENST00000289488 NIM1KQ8IY84 436 aa11.4□□□□□ -0.59
LRTOMT-201ENST00000289488 NAPBQ9H115 298 aa11.4□□□□□ -0.59
LRTOMT-201ENST00000289488 ZNRF3Q9ULT6 936 aa11.4□□□□□ -0.59
LRTOMT-201ENST00000289488 TACC3Q9Y6A5 838 aa11.4□□□□□ -0.59
LRTOMT-201ENST00000289488 SBF1O95248 1867 aa11.39□□□□□ -0.59
LRTOMT-201ENST00000289488 SHTN1A0MZ66 631 aa11.39□□□□□ -0.59
LRTOMT-201ENST00000289488 ST18O60284 1047 aa11.39□□□□□ -0.59
LRTOMT-201ENST00000289488 GTF2F1P35269 517 aaKnown RBP eCLIP11.39□□□□□ -0.59
LRTOMT-201ENST00000289488 RNF20Q5VTR2 975 aa11.39□□□□□ -0.59
LRTOMT-201ENST00000289488 TBC1D10CQ8IV04 446 aa11.39□□□□□ -0.59
LRTOMT-201ENST00000289488 TGFBRAP1Q8WUH2 860 aa11.39□□□□□ -0.59
LRTOMT-201ENST00000289488 LRRC2Q9BYS8 371 aa11.39□□□□□ -0.59
LRTOMT-201ENST00000289488 ZDHHC9Q9Y397 364 aa11.39□□□□□ -0.59
LRTOMT-201ENST00000289488 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.39□□□□□ -0.59
LRTOMT-201ENST00000289488 MINDY4BA8MYZ0 360 aa11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 E7EWF7 191 aa11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 ZNF213O14771 459 aa11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 DTNBO60941 627 aa11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 PTMAP06454 111 aaKnown RBP11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 CACNB3P54284 484 aa11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 HMGN5P82970 282 aaKnown RBP11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 JDP2Q8WYK2 163 aa11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 DCP1AQ9NPI6 582 aaPredicted RBP11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 RPAP1Q9BWH6 1393 aaPredicted RBP11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 GPR75-ASB3A0A0A6YYF3 556 aa11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 CYP2D6P10635 497 aa11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 RBM5P52756 815 aaKnown RBP eCLIP11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 RHBDL3P58872 404 aa11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 GSTO1P78417 241 aa11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 IMMTQ16891 758 aaKnown RBP11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 MAPKAPK5Q8IW41 473 aa11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 IL17RAQ96F46 866 aa11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 GTPBP4Q9BZE4 634 aaKnown RBP11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 GAKO14976 1311 aa11.38□□□□□ -0.59
LRTOMT-201ENST00000289488 USP17L12C9JPN9 530 aa11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 USP17L21D6R901 530 aa11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 USP17L8P0C7I0 530 aa11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 GNAT2P19087 354 aa11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 CRKP46108 304 aa11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 APOBEC3HQ6NTF7 200 aaKnown RBP11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 CRNKL1Q9BZJ0 848 aaKnown RBP11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 TSPY26PQ9H489 355 aa11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 ZSWIM6Q9HCJ5 1215 aa11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 A0A0U1RQG5 324 aaPredicted RBP11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 BAG3O95817 575 aa11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 VIL1P09327 827 aaKnown RBP11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 TSGA10IPQ3SY00 556 aa11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 RSBN1LQ6PCB5 846 aaPredicted RBP11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 CTR9Q6PD62 1173 aa11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 RUFY3Q7L099 469 aa11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 TEKT1Q969V4 418 aa11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 SAP30BPQ9UHR5 308 aaKnown RBP11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 CTNNA3Q9UI47 895 aa11.37□□□□□ -0.59
LRTOMT-201ENST00000289488 SOCS7O14512 581 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 LDHCP07864 332 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 USP5P45974 858 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 AK2P54819 239 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 PPP4CP60510 307 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 PICALMQ13492 652 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 ZNF710Q8N1W2 664 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 RNF214Q8ND24 703 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 PIBF1Q8WXW3 757 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 FAM163AQ96GL9 167 aaPredicted RBP11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 TTC14Q96N46 770 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 NEK1Q96PY6 1258 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 NACAP1Q9BZK3 213 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 GPHNQ9NQX3 736 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms