RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 TM4SF4P48230 202 aa24.96■■□□□ 1.59
RAB28-201ENST00000288723 OPTNQ96CV9 577 aa24.96■■□□□ 1.59
RAB28-201ENST00000288723 NOL10Q9BSC4 688 aaKnown RBP24.96■■□□□ 1.59
RAB28-201ENST00000288723 ZNF341Q9BYN7 854 aa24.96■■□□□ 1.59
RAB28-201ENST00000288723 ZBTB48P10074 688 aaPredicted RBP24.95■■□□□ 1.58
RAB28-201ENST00000288723 CYP7A1P22680 504 aa24.95■■□□□ 1.58
RAB28-201ENST00000288723 INPP5BP32019 993 aa24.95■■□□□ 1.58
RAB28-201ENST00000288723 TEX11Q8IYF3 940 aa24.95■■□□□ 1.58
RAB28-201ENST00000288723 MAGEB6Q8N7X4 407 aa24.95■■□□□ 1.58
RAB28-201ENST00000288723 EDC3Q96F86 508 aaKnown RBP24.95■■□□□ 1.58
RAB28-201ENST00000288723 BOLA2Q9H3K6 86 aa24.94■■□□□ 1.58
RAB28-201ENST00000288723 GOLIM4O00461 696 aa24.93■■□□□ 1.58
RAB28-201ENST00000288723 BAG3O95817 575 aa24.93■■□□□ 1.58
RAB28-201ENST00000288723 DYNLL1P63167 89 aaKnown RBP24.93■■□□□ 1.58
RAB28-201ENST00000288723 SREBF2Q12772 1141 aa24.93■■□□□ 1.58
RAB28-201ENST00000288723 SAGE1Q9NXZ1 904 aa24.93■■□□□ 1.58
RAB28-201ENST00000288723 SNCAIPQ9Y6H5 919 aa24.93■■□□□ 1.58
RAB28-201ENST00000288723 TNS4Q8IZW8 715 aa24.93■■□□□ 1.58
RAB28-201ENST00000288723 MIGA1Q8NAN2 632 aa24.93■■□□□ 1.58
RAB28-201ENST00000288723 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.93■■□□□ 1.58
RAB28-201ENST00000288723 OTUD5Q96G74 571 aa24.93■■□□□ 1.58
RAB28-201ENST00000288723 SUPT16HQ9Y5B9 1047 aaKnown RBP24.93■■□□□ 1.58
RAB28-201ENST00000288723 MAST2Q6P0Q8 1798 aa24.93■■□□□ 1.58
RAB28-201ENST00000288723 PPP4CP60510 307 aa24.92■■□□□ 1.58
RAB28-201ENST00000288723 MAP3K12Q12852 859 aa24.92■■□□□ 1.58
RAB28-201ENST00000288723 ATRNL1Q5VV63 1379 aa24.92■■□□□ 1.58
RAB28-201ENST00000288723 MANSC4A6NHS7 340 aaPredicted RBP24.91■■□□□ 1.58
RAB28-201ENST00000288723 ATP5JP18859 108 aa24.91■■□□□ 1.58
RAB28-201ENST00000288723 TBC1D8O95759 1140 aa24.91■■□□□ 1.58
RAB28-201ENST00000288723 MAP4K4O95819 1239 aaPredicted RBP24.91■■□□□ 1.58
RAB28-201ENST00000288723 TTF1Q15361 905 aaPredicted RBP24.91■■□□□ 1.58
RAB28-201ENST00000288723 OSBPL5Q9H0X9 879 aaPredicted RBP24.91■■□□□ 1.58
RAB28-201ENST00000288723 ZNF112Q9UJU3 913 aa24.91■■□□□ 1.58
RAB28-201ENST00000288723 TGFBRAP1Q8WUH2 860 aa24.9■■□□□ 1.58
RAB28-201ENST00000288723 IGSF3O75054 1194 aa24.89■■□□□ 1.58
RAB28-201ENST00000288723 NPM3O75607 178 aaKnown RBP24.89■■□□□ 1.58
RAB28-201ENST00000288723 PLCG2P16885 1265 aa24.89■■□□□ 1.58
RAB28-201ENST00000288723 MAPKAPK5Q8IW41 473 aa24.89■■□□□ 1.58
RAB28-201ENST00000288723 SPDYE5A6NIY4 337 aa24.89■■□□□ 1.57
RAB28-201ENST00000288723 IGF2BP3O00425 579 aaKnown RBP eCLIP24.89■■□□□ 1.57
RAB28-201ENST00000288723 SLC9C2Q5TAH2 1124 aa24.89■■□□□ 1.57
RAB28-201ENST00000288723 IFNL1Q8IU54 200 aa24.89■■□□□ 1.57
RAB28-201ENST00000288723 PAG1Q9NWQ8 432 aa24.89■■□□□ 1.57
RAB28-201ENST00000288723 FAM196BA6NMK8 535 aa24.88■■□□□ 1.57
RAB28-201ENST00000288723 PHF20L1A8MW92 1017 aa24.88■■□□□ 1.57
RAB28-201ENST00000288723 INHBEP58166 350 aa24.88■■□□□ 1.57
RAB28-201ENST00000288723 TSHZ3Q63HK5 1081 aa24.88■■□□□ 1.57
RAB28-201ENST00000288723 ERO1BQ86YB8 467 aa24.88■■□□□ 1.57
RAB28-201ENST00000288723 MS4A4AQ96JQ5 239 aa24.88■■□□□ 1.57
RAB28-201ENST00000288723 HAUS7Q99871 368 aa24.88■■□□□ 1.57
RAB28-201ENST00000288723 EXOC6Q8TAG9 804 aa24.87■■□□□ 1.57
RAB28-201ENST00000288723 PTPN18Q99952 460 aa24.87■■□□□ 1.57
RAB28-201ENST00000288723 CASP8AP2Q9UKL3 1982 aa24.87■■□□□ 1.57
RAB28-201ENST00000288723 DOCK2Q92608 1830 aa24.87■■□□□ 1.57
RAB28-201ENST00000288723 PDE6AP16499 860 aa24.86■■□□□ 1.57
RAB28-201ENST00000288723 R3HDMLQ9H3Y0 253 aa24.86■■□□□ 1.57
RAB28-201ENST00000288723 ECHDC1Q9NTX5 307 aa24.86■■□□□ 1.57
RAB28-201ENST00000288723 IRF6O14896 467 aa24.86■■□□□ 1.57
RAB28-201ENST00000288723 MAP3K10Q02779 954 aa24.86■■□□□ 1.57
RAB28-201ENST00000288723 SLFNL1Q499Z3 407 aa24.86■■□□□ 1.57
RAB28-201ENST00000288723 FLT1P17948 1338 aa24.85■■□□□ 1.57
RAB28-201ENST00000288723 ZNF532Q9HCE3 1301 aa24.85■■□□□ 1.57
RAB28-201ENST00000288723 BRI3BPQ8WY22 251 aa24.84■■□□□ 1.57
RAB28-201ENST00000288723 SAP30BPQ9UHR5 308 aaKnown RBP24.84■■□□□ 1.57
RAB28-201ENST00000288723 CCL15-CCL14A0A0B4J2E2 113 aa24.84■■□□□ 1.57
RAB28-201ENST00000288723 TESPA1A2RU30 521 aaPredicted RBP24.84■■□□□ 1.57
RAB28-201ENST00000288723 CHGBP05060 677 aa24.84■■□□□ 1.57
RAB28-201ENST00000288723 GTF2A2P52657 109 aa24.84■■□□□ 1.57
RAB28-201ENST00000288723 CCL15Q16663 113 aa24.84■■□□□ 1.57
RAB28-201ENST00000288723 SLC4A8Q2Y0W8 1093 aa24.84■■□□□ 1.57
RAB28-201ENST00000288723 OTUD7AQ8TE49 926 aaPredicted RBP24.84■■□□□ 1.57
RAB28-201ENST00000288723 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.84■■□□□ 1.57
RAB28-201ENST00000288723 PALD1Q9ULE6 856 aa24.84■■□□□ 1.57
RAB28-201ENST00000288723 NOL9Q5SY16 702 aaKnown RBP24.83■■□□□ 1.57
RAB28-201ENST00000288723 RIOK1Q9BRS2 568 aaKnown RBP24.83■■□□□ 1.57
RAB28-201ENST00000288723 TCRBV5S4A2TA0A5A2 114 aa24.82■■□□□ 1.56
RAB28-201ENST00000288723 PPATQ06203 517 aa24.82■■□□□ 1.56
RAB28-201ENST00000288723 PPIL2Q13356 520 aa24.82■■□□□ 1.56
RAB28-201ENST00000288723 HDAC1Q13547 482 aaPredicted RBP24.82■■□□□ 1.56
RAB28-201ENST00000288723 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.82■■□□□ 1.56
RAB28-201ENST00000288723 COL2A1P02458 1487 aaPredicted RBP24.82■■□□□ 1.56
RAB28-201ENST00000288723 MAGEB6P1A0A0J9YX57 407 aa24.82■■□□□ 1.56
RAB28-201ENST00000288723 TBC1D12O60347 775 aa24.82■■□□□ 1.56
RAB28-201ENST00000288723 ALDH1A1P00352 501 aa24.82■■□□□ 1.56
RAB28-201ENST00000288723 USP5P45974 858 aa24.82■■□□□ 1.56
RAB28-201ENST00000288723 IFFO2Q5TF58 517 aa24.82■■□□□ 1.56
RAB28-201ENST00000288723 ANKRD45Q5TZF3 282 aa24.82■■□□□ 1.56
RAB28-201ENST00000288723 SCYL3Q8IZE3 742 aa24.82■■□□□ 1.56
RAB28-201ENST00000288723 TMED8Q6PL24 325 aaPredicted RBP24.81■■□□□ 1.56
RAB28-201ENST00000288723 GPATCH3Q96I76 525 aa24.81■■□□□ 1.56
RAB28-201ENST00000288723 DHX36Q9H2U1 1008 aaKnown RBP24.81■■□□□ 1.56
RAB28-201ENST00000288723 PI4KBQ9UBF8 816 aa24.81■■□□□ 1.56
RAB28-201ENST00000288723 CDK5RAP2Q96SN8 1893 aa24.81■■□□□ 1.56
RAB28-201ENST00000288723 IRX6P78412 446 aaPredicted RBP24.8■■□□□ 1.56
RAB28-201ENST00000288723 SNAPC2Q13487 334 aa24.8■■□□□ 1.56
RAB28-201ENST00000288723 OTUD7BQ6GQQ9 843 aa24.8■■□□□ 1.56
RAB28-201ENST00000288723 LAMB1P07942 1786 aa24.8■■□□□ 1.56
RAB28-201ENST00000288723 CTNND1O60716 968 aaKnown RBP24.79■■□□□ 1.56
RAB28-201ENST00000288723 ADD2P35612 726 aa24.79■■□□□ 1.56
RAB28-201ENST00000288723 RRP1BQ14684 758 aaKnown RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms