RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 USP17L12C9JPN9 530 aa26.03■■□□□ 1.76
PDLIM3-203ENST00000284771 USP17L21D6R901 530 aa26.03■■□□□ 1.76
PDLIM3-203ENST00000284771 MYO1BO43795 1136 aa26.03■■□□□ 1.76
PDLIM3-203ENST00000284771 EIF5BO60841 1220 aaKnown RBP26.03■■□□□ 1.76
PDLIM3-203ENST00000284771 TCP10Q12799 353 aa26.03■■□□□ 1.76
PDLIM3-203ENST00000284771 NACAP1Q9BZK3 213 aa26.03■■□□□ 1.76
PDLIM3-203ENST00000284771 TAF1DQ9H5J8 278 aaPredicted RBP26.03■■□□□ 1.76
PDLIM3-203ENST00000284771 PALD1Q9ULE6 856 aa26.03■■□□□ 1.76
PDLIM3-203ENST00000284771 ZMYM6O95789 1325 aa26.02■■□□□ 1.76
PDLIM3-203ENST00000284771 TCP10L2B9ZVM9 353 aa26.02■■□□□ 1.76
PDLIM3-203ENST00000284771 CYP21A2P08686 494 aa26.02■■□□□ 1.76
PDLIM3-203ENST00000284771 TDO2P48775 406 aa26.02■■□□□ 1.76
PDLIM3-203ENST00000284771 RASEFQ8IZ41 740 aa26.02■■□□□ 1.76
PDLIM3-203ENST00000284771 VEZTQ9HBM0 779 aa26.02■■□□□ 1.76
PDLIM3-203ENST00000284771 MCM9Q9NXL9 1143 aa26.02■■□□□ 1.76
PDLIM3-203ENST00000284771 NPM3O75607 178 aaKnown RBP26.01■■□□□ 1.75
PDLIM3-203ENST00000284771 CNTNAP1P78357 1384 aa26.01■■□□□ 1.75
PDLIM3-203ENST00000284771 SLC4A8Q2Y0W8 1093 aa26.01■■□□□ 1.75
PDLIM3-203ENST00000284771 DDX60LQ5H9U9 1706 aaKnown RBP26.01■■□□□ 1.75
PDLIM3-203ENST00000284771 OSBPL5Q9H0X9 879 aaPredicted RBP26.01■■□□□ 1.75
PDLIM3-203ENST00000284771 SAP30BPQ9UHR5 308 aaKnown RBP26.01■■□□□ 1.75
PDLIM3-203ENST00000284771 POLR2AP24928 1970 aaKnown RBP26.01■■□□□ 1.75
PDLIM3-203ENST00000284771 MYH1P12882 1939 aa26.01■■□□□ 1.75
PDLIM3-203ENST00000284771 NAV1Q8NEY1 1877 aa26■■□□□ 1.75
PDLIM3-203ENST00000284771 CYP2D6P10635 497 aa26■■□□□ 1.75
PDLIM3-203ENST00000284771 CREB3L3Q68CJ9 461 aa26■■□□□ 1.75
PDLIM3-203ENST00000284771 C22orf23Q9BZE7 217 aa26■■□□□ 1.75
PDLIM3-203ENST00000284771 NBPF3Q9H094 633 aa26■■□□□ 1.75
PDLIM3-203ENST00000284771 RRAGCQ9HB90 399 aa26■■□□□ 1.75
PDLIM3-203ENST00000284771 IQCA1LA6NCM1 817 aa25.99■■□□□ 1.75
PDLIM3-203ENST00000284771 SLC27A2O14975 620 aa25.99■■□□□ 1.75
PDLIM3-203ENST00000284771 PLCD1P51178 756 aa25.99■■□□□ 1.75
PDLIM3-203ENST00000284771 HAND2P61296 217 aa25.99■■□□□ 1.75
PDLIM3-203ENST00000284771 ANGEL2Q5VTE6 544 aaKnown RBP25.99■■□□□ 1.75
PDLIM3-203ENST00000284771 FKBP1CQ5VVH2 108 aa25.99■■□□□ 1.75
PDLIM3-203ENST00000284771 SH3BP5LQ7L8J4 393 aa25.99■■□□□ 1.75
PDLIM3-203ENST00000284771 SBK1Q52WX2 424 aa25.99■■□□□ 1.75
PDLIM3-203ENST00000284771 USP50Q70EL3 339 aaPredicted RBP25.99■■□□□ 1.75
PDLIM3-203ENST00000284771 KCNB2Q92953 911 aa25.99■■□□□ 1.75
PDLIM3-203ENST00000284771 TMOD2Q9NZR1 351 aa25.99■■□□□ 1.75
PDLIM3-203ENST00000284771 CTNNA3Q9UI47 895 aa25.99■■□□□ 1.75
PDLIM3-203ENST00000284771 TACC3Q9Y6A5 838 aa25.99■■□□□ 1.75
PDLIM3-203ENST00000284771 DDTLA6NHG4 134 aaPredicted RBP25.98■■□□□ 1.75
PDLIM3-203ENST00000284771 ENTPD3O75355 529 aa25.98■■□□□ 1.75
PDLIM3-203ENST00000284771 C12orf60Q5U649 245 aa25.98■■□□□ 1.75
PDLIM3-203ENST00000284771 ZNF526Q8TF50 670 aaPredicted RBP25.98■■□□□ 1.75
PDLIM3-203ENST00000284771 TBC1D32Q96NH3 1257 aa25.98■■□□□ 1.75
PDLIM3-203ENST00000284771 MINDY4BA8MYZ0 360 aa25.97■■□□□ 1.75
PDLIM3-203ENST00000284771 RBM25P49756 843 aaKnown RBP25.97■■□□□ 1.75
PDLIM3-203ENST00000284771 CDAN1Q8IWY9 1227 aa25.97■■□□□ 1.75
PDLIM3-203ENST00000284771 DDRGK1Q96HY6 314 aa25.97■■□□□ 1.75
PDLIM3-203ENST00000284771 UPF2Q9HAU5 1272 aaKnown RBP25.97■■□□□ 1.75
PDLIM3-203ENST00000284771 NMRK2Q9NPI5 230 aa25.97■■□□□ 1.75
PDLIM3-203ENST00000284771 GGA3Q9NZ52 723 aa25.97■■□□□ 1.75
PDLIM3-203ENST00000284771 PGAP2Q9UHJ9 254 aa25.97■■□□□ 1.75
PDLIM3-203ENST00000284771 POTEIP0CG38 1075 aa25.96■■□□□ 1.75
PDLIM3-203ENST00000284771 POTEJP0CG39 1038 aa25.96■■□□□ 1.75
PDLIM3-203ENST00000284771 PPARAQ07869 468 aa25.96■■□□□ 1.75
PDLIM3-203ENST00000284771 TMEM39BQ9GZU3 492 aa25.96■■□□□ 1.75
PDLIM3-203ENST00000284771 INCENPQ9NQS7 918 aa25.96■■□□□ 1.75
PDLIM3-203ENST00000284771 ARPP21Q9UBL0 812 aaPredicted RBP25.96■■□□□ 1.75
PDLIM3-203ENST00000284771 ZNF213O14771 459 aa25.96■■□□□ 1.75
PDLIM3-203ENST00000284771 SLURP2P0DP57 97 aa25.96■■□□□ 1.75
PDLIM3-203ENST00000284771 VEGFAP15692 232 aaPredicted RBP25.96■■□□□ 1.75
PDLIM3-203ENST00000284771 CTDSPL2Q05D32 466 aa25.96■■□□□ 1.75
PDLIM3-203ENST00000284771 IMMTQ16891 758 aaKnown RBP25.96■■□□□ 1.75
PDLIM3-203ENST00000284771 FAM83AQ86UY5 434 aa25.96■■□□□ 1.75
PDLIM3-203ENST00000284771 FAM151AQ8WW52 585 aa25.96■■□□□ 1.75
PDLIM3-203ENST00000284771 SNX14Q9Y5W7 946 aa25.96■■□□□ 1.75
PDLIM3-203ENST00000284771 COL9A3Q14050 684 aaPredicted RBP25.95■■□□□ 1.74
PDLIM3-203ENST00000284771 RASA3Q14644 834 aa25.95■■□□□ 1.74
PDLIM3-203ENST00000284771 KIF2CQ99661 725 aa25.95■■□□□ 1.74
PDLIM3-203ENST00000284771 ANAPC4Q9UJX5 808 aa25.95■■□□□ 1.74
PDLIM3-203ENST00000284771 POLR3DP05423 398 aaPredicted RBP25.94■■□□□ 1.74
PDLIM3-203ENST00000284771 STOX1Q6ZVD7 989 aa25.94■■□□□ 1.74
PDLIM3-203ENST00000284771 TBC1D10CQ8IV04 446 aa25.94■■□□□ 1.74
PDLIM3-203ENST00000284771 STK11IPQ8N1F8 1099 aa25.94■■□□□ 1.74
PDLIM3-203ENST00000284771 LAMA4Q16363 1823 aa25.94■■□□□ 1.74
PDLIM3-203ENST00000284771 ADCK5Q3MIX3 580 aa25.93■■□□□ 1.74
PDLIM3-203ENST00000284771 TSGA10IPQ3SY00 556 aa25.93■■□□□ 1.74
PDLIM3-203ENST00000284771 EAPPQ56P03 285 aaPredicted RBP25.93■■□□□ 1.74
PDLIM3-203ENST00000284771 NKX2-3Q8TAU0 364 aa25.93■■□□□ 1.74
PDLIM3-203ENST00000284771 TEPSINQ96N21 525 aa25.93■■□□□ 1.74
PDLIM3-203ENST00000284771 DEFB129Q9H1M3 183 aa25.93■■□□□ 1.74
PDLIM3-203ENST00000284771 ATRNL1Q5VV63 1379 aa25.93■■□□□ 1.74
PDLIM3-203ENST00000284771 SIPA1L1O43166 1804 aa25.93■■□□□ 1.74
PDLIM3-203ENST00000284771 LAMB1P07942 1786 aa25.93■■□□□ 1.74
PDLIM3-203ENST00000284771 PNMA8AQ86V59 439 aaPredicted RBP25.93■■□□□ 1.74
PDLIM3-203ENST00000284771 DYNLL2Q96FJ2 89 aa25.93■■□□□ 1.74
PDLIM3-203ENST00000284771 MCCP23508 829 aa25.92■■□□□ 1.74
PDLIM3-203ENST00000284771 RNF20Q5VTR2 975 aa25.92■■□□□ 1.74
PDLIM3-203ENST00000284771 DLK2Q6UY11 383 aa25.92■■□□□ 1.74
PDLIM3-203ENST00000284771 ZC3H15Q8WU90 426 aaKnown RBP25.92■■□□□ 1.74
PDLIM3-203ENST00000284771 DHX36Q9H2U1 1008 aaKnown RBP25.92■■□□□ 1.74
PDLIM3-203ENST00000284771 PITPNM2Q9BZ72 1349 aa25.91■■□□□ 1.74
PDLIM3-203ENST00000284771 TNFAIP1Q13829 316 aa25.91■■□□□ 1.74
PDLIM3-203ENST00000284771 ZSCAN29Q8IWY8 852 aaPredicted RBP25.91■■□□□ 1.74
PDLIM3-203ENST00000284771 IL17RAQ96F46 866 aa25.91■■□□□ 1.74
PDLIM3-203ENST00000284771 COL2A1P02458 1487 aaPredicted RBP25.9■■□□□ 1.74
PDLIM3-203ENST00000284771 E7EWF7 191 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms