RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 ZMYM1Q5SVZ6 1142 aa15.38■□□□□ 0.05
SS18-202ENST00000269138 GBA2Q9HCG7 927 aaPredicted RBP15.38■□□□□ 0.05
SS18-202ENST00000269138 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
SS18-202ENST00000269138 SLURP2P0DP57 97 aa15.38■□□□□ 0.05
SS18-202ENST00000269138 LRRFIP1Q32MZ4 808 aaKnown RBP15.38■□□□□ 0.05
SS18-202ENST00000269138 SUPT20HL1Q3ZLR7 823 aa15.38■□□□□ 0.05
SS18-202ENST00000269138 OSBPL5Q9H0X9 879 aaPredicted RBP15.38■□□□□ 0.05
SS18-202ENST00000269138 FLT1P17948 1338 aa15.37■□□□□ 0.05
SS18-202ENST00000269138 UBE2Q2LH0YL09 131 aa15.37■□□□□ 0.05
SS18-202ENST00000269138 NF2P35240 595 aa15.37■□□□□ 0.05
SS18-202ENST00000269138 USP5P45974 858 aa15.37■□□□□ 0.05
SS18-202ENST00000269138 CERS3Q8IU89 383 aa15.37■□□□□ 0.05
SS18-202ENST00000269138 ZSCAN29Q8IWY8 852 aaPredicted RBP15.37■□□□□ 0.05
SS18-202ENST00000269138 C2orf69Q8N8R5 385 aa15.37■□□□□ 0.05
SS18-202ENST00000269138 SDR42E1Q8WUS8 393 aa15.37■□□□□ 0.05
SS18-202ENST00000269138 AIDAQ96BJ3 306 aa15.37■□□□□ 0.05
SS18-202ENST00000269138 FAM227BQ96M60 508 aa15.37■□□□□ 0.05
SS18-202ENST00000269138 STRBPQ96SI9 672 aaKnown RBP15.37■□□□□ 0.05
SS18-202ENST00000269138 CRNKL1Q9BZJ0 848 aaKnown RBP15.37■□□□□ 0.05
SS18-202ENST00000269138 CREBZFQ9NS37 354 aa15.37■□□□□ 0.05
SS18-202ENST00000269138 SAP30BPQ9UHR5 308 aaKnown RBP15.37■□□□□ 0.05
SS18-202ENST00000269138 NMIQ13287 307 aaPredicted RBP15.36■□□□□ 0.05
SS18-202ENST00000269138 TTLL12Q14166 644 aaPredicted RBP15.36■□□□□ 0.05
SS18-202ENST00000269138 SLC4A8Q2Y0W8 1093 aa15.36■□□□□ 0.05
SS18-202ENST00000269138 CCDC129Q6ZRS4 1044 aa15.36■□□□□ 0.05
SS18-202ENST00000269138 MIGA2Q7L4E1 593 aa15.36■□□□□ 0.05
SS18-202ENST00000269138 ABT1Q9ULW3 272 aaKnown RBP15.36■□□□□ 0.05
SS18-202ENST00000269138 MYH7P12883 1935 aa15.36■□□□□ 0.05
SS18-202ENST00000269138 A0A0D9SFI3 127 aa15.35■□□□□ 0.05
SS18-202ENST00000269138 GPAA1O43292 621 aa15.35■□□□□ 0.05
SS18-202ENST00000269138 USP2O75604 605 aaPredicted RBP15.35■□□□□ 0.05
SS18-202ENST00000269138 SAPCD2Q86UD0 394 aa15.35■□□□□ 0.05
SS18-202ENST00000269138 TRPM7Q96QT4 1865 aa15.35■□□□□ 0.05
SS18-202ENST00000269138 CSRNP1Q96S65 589 aa15.35■□□□□ 0.05
SS18-202ENST00000269138 RPAP1Q9BWH6 1393 aaPredicted RBP15.35■□□□□ 0.05
SS18-202ENST00000269138 MKRN1Q9UHC7 482 aaKnown RBP15.35■□□□□ 0.05
SS18-202ENST00000269138 PALD1Q9ULE6 856 aa15.35■□□□□ 0.05
SS18-202ENST00000269138 ANGEL1Q9UNK9 670 aaKnown RBP15.35■□□□□ 0.05
SS18-202ENST00000269138 TLL2Q9Y6L7 1015 aa15.35■□□□□ 0.05
SS18-202ENST00000269138 SLC4A4Q9Y6R1 1079 aa15.35■□□□□ 0.05
SS18-202ENST00000269138 HUNKP57058 714 aa15.34■□□□□ 0.05
SS18-202ENST00000269138 DCP1AQ9NPI6 582 aaPredicted RBP15.34■□□□□ 0.05
SS18-202ENST00000269138 ATRNL1Q5VV63 1379 aa15.33■□□□□ 0.05
SS18-202ENST00000269138 EVX2Q03828 476 aa15.33■□□□□ 0.05
SS18-202ENST00000269138 HELLSQ9NRZ9 838 aa15.33■□□□□ 0.05
SS18-202ENST00000269138 FAM196BA6NMK8 535 aa15.33■□□□□ 0.04
SS18-202ENST00000269138 GSG1L2A8MUP6 293 aa15.33■□□□□ 0.04
SS18-202ENST00000269138 PPP1R12BO60237 982 aaPredicted RBP15.33■□□□□ 0.04
SS18-202ENST00000269138 CYP2D6P10635 497 aa15.33■□□□□ 0.04
SS18-202ENST00000269138 FKBP1BP68106 108 aa15.33■□□□□ 0.04
SS18-202ENST00000269138 ARMC9Q7Z3E5 817 aa15.33■□□□□ 0.04
SS18-202ENST00000269138 TICAM2Q86XR7 235 aa15.33■□□□□ 0.04
SS18-202ENST00000269138 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.33■□□□□ 0.04
SS18-202ENST00000269138 CDK5RAP2Q96SN8 1893 aa15.32■□□□□ 0.04
SS18-202ENST00000269138 MAP3K11Q16584 847 aa15.32■□□□□ 0.04
SS18-202ENST00000269138 MCMDC2Q4G0Z9 681 aa15.32■□□□□ 0.04
SS18-202ENST00000269138 LDLRAD1Q5T700 205 aa15.32■□□□□ 0.04
SS18-202ENST00000269138 CWC27Q6UX04 472 aaKnown RBP15.32■□□□□ 0.04
SS18-202ENST00000269138 ZNF589Q86UQ0 364 aaPredicted RBP15.32■□□□□ 0.04
SS18-202ENST00000269138 DIAPH3Q9NSV4 1193 aa15.32■□□□□ 0.04
SS18-202ENST00000269138 ATP8A2Q9NTI2 1148 aa15.32■□□□□ 0.04
SS18-202ENST00000269138 MCM9Q9NXL9 1143 aa15.32■□□□□ 0.04
SS18-202ENST00000269138 COL2A1P02458 1487 aaPredicted RBP15.31■□□□□ 0.04
SS18-202ENST00000269138 CYP2D7A0A087X1C5 515 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 SMIM22K7EJ46 135 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 FOXP2O15409 715 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 CHMLP26374 656 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 PLCD1P51178 756 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 MAP3K10Q02779 954 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 DEFB115Q30KQ5 88 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 BMP2KLQ5H9B9 411 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 VPS53Q5VIR6 699 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 DCAF15Q66K64 600 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 KLRG1Q96E93 195 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 HOOK2Q96ED9 719 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 CLMNQ96JQ2 1002 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 ZNF341Q9BYN7 854 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 DHX36Q9H2U1 1008 aaKnown RBP15.31■□□□□ 0.04
SS18-202ENST00000269138 EPB41L4AQ9HCS5 686 aaPredicted RBP15.31■□□□□ 0.04
SS18-202ENST00000269138 PI4KBQ9UBF8 816 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 PAPPA2Q9BXP8 1791 aa15.31■□□□□ 0.04
SS18-202ENST00000269138 RASSF10A6NK89 507 aa15.3■□□□□ 0.04
SS18-202ENST00000269138 PATL2C9JE40 543 aaKnown RBP15.3■□□□□ 0.04
SS18-202ENST00000269138 POLR3DP05423 398 aaPredicted RBP15.3■□□□□ 0.04
SS18-202ENST00000269138 IREB2P48200 963 aaKnown RBP15.3■□□□□ 0.04
SS18-202ENST00000269138 CYP4F22Q6NT55 531 aa15.3■□□□□ 0.04
SS18-202ENST00000269138 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.3■□□□□ 0.04
SS18-202ENST00000269138 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.3■□□□□ 0.04
SS18-202ENST00000269138 IL25Q9H293 177 aa15.3■□□□□ 0.04
SS18-202ENST00000269138 AK9Q5TCS8 1911 aa15.29■□□□□ 0.04
SS18-202ENST00000269138 FOCADQ5VW36 1801 aa15.29■□□□□ 0.04
SS18-202ENST00000269138 PHF20L1A8MW92 1017 aa15.29■□□□□ 0.04
SS18-202ENST00000269138 USP17L12C9JPN9 530 aa15.29■□□□□ 0.04
SS18-202ENST00000269138 USP17L21D6R901 530 aa15.29■□□□□ 0.04
SS18-202ENST00000269138 HIP1O00291 1037 aa15.29■□□□□ 0.04
SS18-202ENST00000269138 APPP05067 770 aa15.29■□□□□ 0.04
SS18-202ENST00000269138 GNAT2P19087 354 aa15.29■□□□□ 0.04
SS18-202ENST00000269138 INPP5BP32019 993 aa15.29■□□□□ 0.04
SS18-202ENST00000269138 MAP3K9P80192 1104 aa15.29■□□□□ 0.04
SS18-202ENST00000269138 RRP1BQ14684 758 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms