RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 SLC10A4Q96EP9 437 aa10.24□□□□□ -0.77
ERCC8-201ENST00000265038 SALL3Q9BXA9 1300 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 TCRBV5S4A2TA0A5A2 114 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 SLURP2P0DP57 97 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 SLFNL1Q499Z3 407 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 SLC9C2Q5TAH2 1124 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 TMED8Q6PL24 325 aaPredicted RBP10.23□□□□□ -0.77
ERCC8-201ENST00000265038 HOOK2Q96ED9 719 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 CSRNP1Q96S65 589 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 NOL10Q9BSC4 688 aaKnown RBP10.23□□□□□ -0.77
ERCC8-201ENST00000265038 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.23□□□□□ -0.77
ERCC8-201ENST00000265038 ATRNL1Q5VV63 1379 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 ZNF532Q9HCE3 1301 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 AKAP11Q9UKA4 1901 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 FOXN1O15353 648 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 CHGBP05060 677 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 PLCG2P16885 1265 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 GJA5P36382 358 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 MAP3K10Q02779 954 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 MKRN3Q13064 507 aaKnown RBP10.23□□□□□ -0.77
ERCC8-201ENST00000265038 SPRYD7Q5W111 196 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 DCAF15Q66K64 600 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 ZSCAN29Q8IWY8 852 aaPredicted RBP10.23□□□□□ -0.77
ERCC8-201ENST00000265038 PI4K2BQ8TCG2 481 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 TGFBRAP1Q8WUH2 860 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 GPATCH3Q96I76 525 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 RIOK1Q9BRS2 568 aaKnown RBP10.23□□□□□ -0.77
ERCC8-201ENST00000265038 ZNF341Q9BYN7 854 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 OSBPL5Q9H0X9 879 aaPredicted RBP10.23□□□□□ -0.77
ERCC8-201ENST00000265038 ZNF112Q9UJU3 913 aa10.23□□□□□ -0.77
ERCC8-201ENST00000265038 TTC41PQ6P2S7 1318 aa10.22□□□□□ -0.77
ERCC8-201ENST00000265038 ADD2P35612 726 aa10.22□□□□□ -0.77
ERCC8-201ENST00000265038 VGLL4Q14135 290 aa10.22□□□□□ -0.77
ERCC8-201ENST00000265038 WNK4Q96J92 1243 aa10.22□□□□□ -0.77
ERCC8-201ENST00000265038 WRNIP1Q96S55 665 aa10.22□□□□□ -0.77
ERCC8-201ENST00000265038 ELP3Q9H9T3 547 aa10.22□□□□□ -0.77
ERCC8-201ENST00000265038 PHF20L1A8MW92 1017 aa10.21□□□□□ -0.77
ERCC8-201ENST00000265038 MX1P20591 662 aa10.21□□□□□ -0.77
ERCC8-201ENST00000265038 INPP5BP32019 993 aa10.21□□□□□ -0.77
ERCC8-201ENST00000265038 B4GALNT3Q6L9W6 998 aa10.21□□□□□ -0.77
ERCC8-201ENST00000265038 MAPKAPK5Q8IW41 473 aa10.21□□□□□ -0.77
ERCC8-201ENST00000265038 ZKSCAN4Q969J2 545 aaPredicted RBP10.21□□□□□ -0.77
ERCC8-201ENST00000265038 SNCAIPQ9Y6H5 919 aa10.21□□□□□ -0.77
ERCC8-201ENST00000265038 FLT1P17948 1338 aa10.21□□□□□ -0.78
ERCC8-201ENST00000265038 MYH13Q9UKX3 1938 aa10.21□□□□□ -0.78
ERCC8-201ENST00000265038 MAGEB6P1A0A0J9YX57 407 aa10.21□□□□□ -0.78
ERCC8-201ENST00000265038 NUCB1Q02818 461 aa10.21□□□□□ -0.78
ERCC8-201ENST00000265038 UBE3CQ15386 1083 aa10.21□□□□□ -0.78
ERCC8-201ENST00000265038 AIDAQ96BJ3 306 aa10.21□□□□□ -0.78
ERCC8-201ENST00000265038 LNPKQ9C0E8 428 aa10.21□□□□□ -0.78
ERCC8-201ENST00000265038 ZBTB47Q9UFB7 747 aaPredicted RBP10.21□□□□□ -0.78
ERCC8-201ENST00000265038 STAP2Q9UGK3 403 aa10.21□□□□□ -0.78
ERCC8-201ENST00000265038 ECM29Q5VYK3 1845 aa10.21□□□□□ -0.78
ERCC8-201ENST00000265038 ERC2O15083 957 aa10.2□□□□□ -0.78
ERCC8-201ENST00000265038 TBC1D12O60347 775 aa10.2□□□□□ -0.78
ERCC8-201ENST00000265038 GLRX3O76003 335 aaKnown RBP10.2□□□□□ -0.78
ERCC8-201ENST00000265038 ZBTB48P10074 688 aaPredicted RBP10.2□□□□□ -0.78
ERCC8-201ENST00000265038 TM4SF4P48230 202 aa10.2□□□□□ -0.78
ERCC8-201ENST00000265038 CHD1LQ86WJ1 897 aa10.2□□□□□ -0.78
ERCC8-201ENST00000265038 CERS3Q8IU89 383 aa10.2□□□□□ -0.78
ERCC8-201ENST00000265038 KBTBD3Q8NAB2 608 aa10.2□□□□□ -0.78
ERCC8-201ENST00000265038 OPTNQ96CV9 577 aa10.2□□□□□ -0.78
ERCC8-201ENST00000265038 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.2□□□□□ -0.78
ERCC8-201ENST00000265038 CSADQ9Y600 493 aa10.2□□□□□ -0.78
ERCC8-201ENST00000265038 THSD7BQ9C0I4 1608 aa10.2□□□□□ -0.78
ERCC8-201ENST00000265038 HSPA8P11142 646 aaKnown RBP10.19□□□□□ -0.78
ERCC8-201ENST00000265038 PDE1AP54750 535 aa10.19□□□□□ -0.78
ERCC8-201ENST00000265038 REM2Q8IYK8 340 aaPredicted RBP10.19□□□□□ -0.78
ERCC8-201ENST00000265038 LCORLQ8N3X6 602 aa10.19□□□□□ -0.78
ERCC8-201ENST00000265038 BEGAINQ9BUH8 593 aa10.19□□□□□ -0.78
ERCC8-201ENST00000265038 RNF186Q9NXI6 227 aa10.19□□□□□ -0.78
ERCC8-201ENST00000265038 PALD1Q9ULE6 856 aa10.19□□□□□ -0.78
ERCC8-201ENST00000265038 COL2A1P02458 1487 aaPredicted RBP10.19□□□□□ -0.78
ERCC8-201ENST00000265038 SPDYE5A6NIY4 337 aa10.19□□□□□ -0.78
ERCC8-201ENST00000265038 FAM196BA6NMK8 535 aa10.19□□□□□ -0.78
ERCC8-201ENST00000265038 CTCFP49711 727 aaPredicted RBP10.19□□□□□ -0.78
ERCC8-201ENST00000265038 NOL9Q5SY16 702 aaKnown RBP10.19□□□□□ -0.78
ERCC8-201ENST00000265038 ZSCAN25Q6NSZ9 544 aa10.19□□□□□ -0.78
ERCC8-201ENST00000265038 MS4A4AQ96JQ5 239 aa10.19□□□□□ -0.78
ERCC8-201ENST00000265038 PUS7LQ9H0K6 701 aaKnown RBP10.19□□□□□ -0.78
ERCC8-201ENST00000265038 DHX36Q9H2U1 1008 aaKnown RBP10.19□□□□□ -0.78
ERCC8-201ENST00000265038 ARMT1Q9H993 441 aa10.19□□□□□ -0.78
ERCC8-201ENST00000265038 PI4KBQ9UBF8 816 aa10.19□□□□□ -0.78
ERCC8-201ENST00000265038 SAP30BPQ9UHR5 308 aaKnown RBP10.19□□□□□ -0.78
ERCC8-201ENST00000265038 TSKSQ9UJT2 592 aa10.19□□□□□ -0.78
ERCC8-201ENST00000265038 MYH2Q9UKX2 1941 aa10.18□□□□□ -0.78
ERCC8-201ENST00000265038 USP5P45974 858 aa10.18□□□□□ -0.78
ERCC8-201ENST00000265038 RRP1BQ14684 758 aaKnown RBP10.18□□□□□ -0.78
ERCC8-201ENST00000265038 ERO1BQ86YB8 467 aa10.18□□□□□ -0.78
ERCC8-201ENST00000265038 OTUD5Q96G74 571 aa10.18□□□□□ -0.78
ERCC8-201ENST00000265038 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.18□□□□□ -0.78
ERCC8-201ENST00000265038 TESPA1A2RU30 521 aaPredicted RBP10.17□□□□□ -0.78
ERCC8-201ENST00000265038 MANSC4A6NHS7 340 aaPredicted RBP10.17□□□□□ -0.78
ERCC8-201ENST00000265038 RNF113AO15541 343 aaKnown RBP10.17□□□□□ -0.78
ERCC8-201ENST00000265038 CA12O43570 354 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 PRKAB2O43741 272 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 TRPA1O75762 1119 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 MBD4O95243 580 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 LBX1P52954 281 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 SREBF2Q12772 1141 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms