RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 PES1O00541 588 aaKnown RBP16.12■□□□□ 0.17
SCARF1-201ENST00000263071 GCFC2P16383 781 aaKnown RBP16.12■□□□□ 0.17
SCARF1-201ENST00000263071 KARSQ15046 597 aaKnown RBP16.12■□□□□ 0.17
SCARF1-201ENST00000263071 CCDC57Q2TAC2 916 aa16.12■□□□□ 0.17
SCARF1-201ENST00000263071 LRRC31Q6UY01 552 aa16.12■□□□□ 0.17
SCARF1-201ENST00000263071 OSBP2Q969R2 916 aa16.12■□□□□ 0.17
SCARF1-201ENST00000263071 MTMR7Q9Y216 660 aa16.12■□□□□ 0.17
SCARF1-201ENST00000263071 hCG_1642624A0A1W2PR95 340 aa16.12■□□□□ 0.17
SCARF1-201ENST00000263071 FRMD3A2A2Y4 597 aa16.12■□□□□ 0.17
SCARF1-201ENST00000263071 SNAP23O00161 211 aa16.12■□□□□ 0.17
SCARF1-201ENST00000263071 ZNF202O95125 648 aa16.12■□□□□ 0.17
SCARF1-201ENST00000263071 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
SCARF1-201ENST00000263071 PSMD2Q13200 908 aa16.12■□□□□ 0.17
SCARF1-201ENST00000263071 ANKRD18AQ8IVF6 992 aa16.12■□□□□ 0.17
SCARF1-201ENST00000263071 SH3GL3Q99963 347 aa16.12■□□□□ 0.17
SCARF1-201ENST00000263071 IQSEC3Q9UPP2 1182 aaPredicted RBP16.12■□□□□ 0.17
SCARF1-201ENST00000263071 C21orf2O43822 256 aa16.11■□□□□ 0.17
SCARF1-201ENST00000263071 UBASH3AP57075 661 aa16.11■□□□□ 0.17
SCARF1-201ENST00000263071 LONRF2Q1L5Z9 754 aa16.11■□□□□ 0.17
SCARF1-201ENST00000263071 NUP133Q8WUM0 1156 aa16.11■□□□□ 0.17
SCARF1-201ENST00000263071 STAG1Q8WVM7 1258 aa16.11■□□□□ 0.17
SCARF1-201ENST00000263071 A0A1B0GUA9 196 aa16.11■□□□□ 0.17
SCARF1-201ENST00000263071 EPB41L2O43491 1005 aaKnown RBP16.11■□□□□ 0.17
SCARF1-201ENST00000263071 RPS6KA5O75582 802 aa16.11■□□□□ 0.17
SCARF1-201ENST00000263071 IMMTQ16891 758 aaKnown RBP16.11■□□□□ 0.17
SCARF1-201ENST00000263071 GPR161Q8N6U8 529 aaKnown RBP16.11■□□□□ 0.17
SCARF1-201ENST00000263071 CNNM3Q8NE01 707 aa16.11■□□□□ 0.17
SCARF1-201ENST00000263071 FUT8Q9BYC5 575 aa16.11■□□□□ 0.17
SCARF1-201ENST00000263071 HOXB7P09629 217 aa16.1■□□□□ 0.17
SCARF1-201ENST00000263071 CLNS1AP54105 237 aaKnown RBP16.1■□□□□ 0.17
SCARF1-201ENST00000263071 SLC4A8Q2Y0W8 1093 aa16.1■□□□□ 0.17
SCARF1-201ENST00000263071 DESI2Q9BSY9 194 aa16.1■□□□□ 0.17
SCARF1-201ENST00000263071 PFKFB2O60825 505 aa16.1■□□□□ 0.17
SCARF1-201ENST00000263071 ARMC2Q8NEN0 867 aa16.1■□□□□ 0.17
SCARF1-201ENST00000263071 SLC52A2Q9HAB3 445 aa16.1■□□□□ 0.17
SCARF1-201ENST00000263071 MAST3O60307 1309 aa16.1■□□□□ 0.17
SCARF1-201ENST00000263071 ZNF213O14771 459 aa16.1■□□□□ 0.17
SCARF1-201ENST00000263071 TADA3O75528 432 aa16.1■□□□□ 0.17
SCARF1-201ENST00000263071 HMGB1P09429 215 aaKnown RBP16.1■□□□□ 0.17
SCARF1-201ENST00000263071 INPP5BP32019 993 aa16.1■□□□□ 0.17
SCARF1-201ENST00000263071 ZAP70P43403 619 aa16.1■□□□□ 0.17
SCARF1-201ENST00000263071 EBAG9O00559 213 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 SYKP43405 635 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 STX17P56962 302 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 CCZ1BP86790 482 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 CCZ1P86791 482 aaPredicted RBP16.09■□□□□ 0.17
SCARF1-201ENST00000263071 ATP2B2Q01814 1243 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 SCARF1Q14162 830 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 RBBP5Q15291 538 aaKnown RBP16.09■□□□□ 0.17
SCARF1-201ENST00000263071 CCDC93Q567U6 631 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 GRAMD1CQ8IYS0 662 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 DPF2Q92785 391 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 CABS1Q96KC9 395 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 NPHP4O75161 1426 aaPredicted RBP16.09■□□□□ 0.17
SCARF1-201ENST00000263071 SPATA31D1Q6ZQQ2 1576 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 TMEM232C9JQI7 657 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 ADCY2Q08462 1091 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 PPP1R13BQ96KQ4 1090 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 HAUS7Q99871 368 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 ALG1Q9BT22 464 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 BABAM1Q9NWV8 329 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 KIAA1468Q9P260 1216 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 RCOR1Q9UKL0 485 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.09■□□□□ 0.17
SCARF1-201ENST00000263071 PXDNQ92626 1479 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 B4E1Z4 1266 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 KIF28PB7ZC32 967 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 FGAP02671 866 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 PEX19P40855 299 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 ADKP55263 362 aaKnown RBP16.09■□□□□ 0.17
SCARF1-201ENST00000263071 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
SCARF1-201ENST00000263071 WWC2Q6AWC2 1192 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 THOC1Q96FV9 657 aaKnown RBP16.09■□□□□ 0.17
SCARF1-201ENST00000263071 CENPHQ9H3R5 247 aa16.09■□□□□ 0.17
SCARF1-201ENST00000263071 FOXN1O15353 648 aa16.08■□□□□ 0.16
SCARF1-201ENST00000263071 PFKFB1P16118 471 aa16.08■□□□□ 0.16
SCARF1-201ENST00000263071 GNG11P61952 73 aa16.08■□□□□ 0.16
SCARF1-201ENST00000263071 TRIM29Q14134 588 aa16.08■□□□□ 0.16
SCARF1-201ENST00000263071 STAMQ92783 540 aa16.08■□□□□ 0.16
SCARF1-201ENST00000263071 PARD6BQ9BYG5 372 aa16.08■□□□□ 0.16
SCARF1-201ENST00000263071 PUS7LQ9H0K6 701 aaKnown RBP16.08■□□□□ 0.16
SCARF1-201ENST00000263071 USP42Q9H9J4 1324 aaKnown RBP16.08■□□□□ 0.16
SCARF1-201ENST00000263071 RNF113AO15541 343 aaKnown RBP16.08■□□□□ 0.16
SCARF1-201ENST00000263071 ETF1P62495 437 aaKnown RBP16.08■□□□□ 0.16
SCARF1-201ENST00000263071 FANCCQ00597 558 aa16.08■□□□□ 0.16
SCARF1-201ENST00000263071 NAA25Q14CX7 972 aa16.08■□□□□ 0.16
SCARF1-201ENST00000263071 CNNM1Q9NRU3 951 aa16.08■□□□□ 0.16
SCARF1-201ENST00000263071 AKAP2Q9Y2D5 859 aa16.08■□□□□ 0.16
SCARF1-201ENST00000263071 CEMIPQ8WUJ3 1361 aa16.08■□□□□ 0.16
SCARF1-201ENST00000263071 MED23Q9ULK4 1368 aa16.08■□□□□ 0.16
SCARF1-201ENST00000263071 PLEKHG1Q9ULL1 1385 aa16.08■□□□□ 0.16
SCARF1-201ENST00000263071 TOP1P11387 765 aaKnown RBP16.07■□□□□ 0.16
SCARF1-201ENST00000263071 FDPSP14324 419 aaKnown RBP16.07■□□□□ 0.16
SCARF1-201ENST00000263071 ARMCX5Q6P1M9 558 aa16.07■□□□□ 0.16
SCARF1-201ENST00000263071 KCNV1Q6PIU1 500 aa16.07■□□□□ 0.16
SCARF1-201ENST00000263071 ARHGEF25Q86VW2 580 aa16.07■□□□□ 0.16
SCARF1-201ENST00000263071 SLC26A6Q9BXS9 759 aa16.07■□□□□ 0.16
SCARF1-201ENST00000263071 SENP2Q9HC62 589 aa16.07■□□□□ 0.16
SCARF1-201ENST00000263071 CARMIL3Q8ND23 1372 aa16.07■□□□□ 0.16
SCARF1-201ENST00000263071 TUBB4AP04350 444 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms