RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 ZNF213O14771 459 aa10.98□□□□□ -0.65
SIM1-201ENST00000262901 BBOX1O75936 387 aa10.98□□□□□ -0.65
SIM1-201ENST00000262901 GYS2P54840 703 aa10.98□□□□□ -0.65
SIM1-201ENST00000262901 GRAPQ13588 217 aa10.98□□□□□ -0.65
SIM1-201ENST00000262901 ZC3H12AQ5D1E8 599 aaKnown RBP10.98□□□□□ -0.65
SIM1-201ENST00000262901 TMC4Q7Z404 712 aa10.98□□□□□ -0.65
SIM1-201ENST00000262901 C17orf53Q8N3J3 647 aaPredicted RBP10.98□□□□□ -0.65
SIM1-201ENST00000262901 GRAPLQ8TC17 118 aaPredicted RBP10.98□□□□□ -0.65
SIM1-201ENST00000262901 UBXN4Q92575 508 aa10.98□□□□□ -0.65
SIM1-201ENST00000262901 BRIP1Q9BX63 1249 aa10.98□□□□□ -0.65
SIM1-201ENST00000262901 BSDC1Q9NW68 430 aaPredicted RBP10.98□□□□□ -0.65
SIM1-201ENST00000262901 ORC3Q9UBD5 711 aaPredicted RBP10.98□□□□□ -0.65
SIM1-201ENST00000262901 UBR2Q8IWV8 1755 aa10.98□□□□□ -0.65
SIM1-201ENST00000262901 PAPPAQ13219 1627 aa10.98□□□□□ -0.65
SIM1-201ENST00000262901 MPHOSPH10O00566 681 aaKnown RBP10.98□□□□□ -0.65
SIM1-201ENST00000262901 URI1O94763 535 aaPredicted RBP10.98□□□□□ -0.65
SIM1-201ENST00000262901 SLFN14P0C7P3 912 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 ATP5JP18859 108 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 U2AF2P26368 475 aaKnown RBP eCLIP10.97□□□□□ -0.65
SIM1-201ENST00000262901 CEP89Q96ST8 783 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 GADD45BO75293 160 aaPredicted RBP10.97□□□□□ -0.65
SIM1-201ENST00000262901 CDKL5O76039 1030 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 NPR1P16066 1061 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 CNKSR1Q969H4 720 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 NAPBQ9H115 298 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 MCM5P33992 734 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 MAP3K12Q12852 859 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 UBE4AQ14139 1066 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 Q6ZUG5 572 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 TMC6Q7Z403 805 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 KIF18AQ8NI77 898 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 CPLX3Q8WVH0 158 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 DONSONQ9NYP3 566 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 TMEM63CQ9P1W3 806 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.97□□□□□ -0.65
SIM1-201ENST00000262901 DBNLQ9UJU6 430 aaKnown RBP10.97□□□□□ -0.65
SIM1-201ENST00000262901 GGA1Q9UJY5 639 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 NDUFB9Q9Y6M9 179 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 RPS6KL1Q9Y6S9 549 aa10.97□□□□□ -0.65
SIM1-201ENST00000262901 V9GYY5 206 aaPredicted RBP10.97□□□□□ -0.65
SIM1-201ENST00000262901 ATG9AQ7Z3C6 839 aa10.96□□□□□ -0.65
SIM1-201ENST00000262901 LMBRD1Q9NUN5 540 aa10.96□□□□□ -0.65
SIM1-201ENST00000262901 PAG1Q9NWQ8 432 aa10.96□□□□□ -0.65
SIM1-201ENST00000262901 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.96□□□□□ -0.65
SIM1-201ENST00000262901 UFL1O94874 794 aa10.96□□□□□ -0.65
SIM1-201ENST00000262901 SLC3A2P08195 630 aaKnown RBP10.96□□□□□ -0.65
SIM1-201ENST00000262901 ZNF804AQ7Z570 1209 aa10.96□□□□□ -0.65
SIM1-201ENST00000262901 CELF1Q92879 486 aaKnown RBP10.96□□□□□ -0.65
SIM1-201ENST00000262901 PNPLA7Q6ZV29 1317 aa10.96□□□□□ -0.66
SIM1-201ENST00000262901 SMTNL1A8MU46 457 aa10.96□□□□□ -0.66
SIM1-201ENST00000262901 TXLNAP40222 546 aa10.96□□□□□ -0.66
SIM1-201ENST00000262901 ATP2B2Q01814 1243 aa10.96□□□□□ -0.66
SIM1-201ENST00000262901 CREB3L3Q68CJ9 461 aa10.96□□□□□ -0.66
SIM1-201ENST00000262901 LUZP1Q86V48 1076 aa10.96□□□□□ -0.66
SIM1-201ENST00000262901 FAM200AQ8TCP9 573 aa10.96□□□□□ -0.66
SIM1-201ENST00000262901 PALD1Q9ULE6 856 aa10.96□□□□□ -0.66
SIM1-201ENST00000262901 RIPOR2Q9Y4F9 1068 aa10.96□□□□□ -0.66
SIM1-201ENST00000262901 SMARCE1Q969G3 411 aa10.95□□□□□ -0.66
SIM1-201ENST00000262901 MASTLQ96GX5 879 aa10.95□□□□□ -0.66
SIM1-201ENST00000262901 EYA3Q99504 573 aa10.95□□□□□ -0.66
SIM1-201ENST00000262901 ZC3H12CQ9C0D7 883 aaKnown RBP10.95□□□□□ -0.66
SIM1-201ENST00000262901 SUFUQ9UMX1 484 aa10.95□□□□□ -0.66
SIM1-201ENST00000262901 ATF5Q9Y2D1 282 aaPredicted RBP10.95□□□□□ -0.66
SIM1-201ENST00000262901 ZBTB7AO95365 584 aa10.95□□□□□ -0.66
SIM1-201ENST00000262901 SSR1P43307 286 aaKnown RBP10.95□□□□□ -0.66
SIM1-201ENST00000262901 UVSSAQ2YD98 709 aa10.95□□□□□ -0.66
SIM1-201ENST00000262901 RUFY1Q96T51 708 aa10.95□□□□□ -0.66
SIM1-201ENST00000262901 TSPYL1Q9H0U9 437 aa10.95□□□□□ -0.66
SIM1-201ENST00000262901 TLR7Q9NYK1 1049 aaKnown RBP10.95□□□□□ -0.66
SIM1-201ENST00000262901 MRVI1Q9Y6F6 885 aa10.95□□□□□ -0.66
SIM1-201ENST00000262901 POLRMTO00411 1230 aaKnown RBP10.95□□□□□ -0.66
SIM1-201ENST00000262901 IFIT3O14879 490 aaKnown RBP10.95□□□□□ -0.66
SIM1-201ENST00000262901 CCP110O43303 1012 aa10.95□□□□□ -0.66
SIM1-201ENST00000262901 ZFYP08048 801 aaPredicted RBP10.95□□□□□ -0.66
SIM1-201ENST00000262901 ATP2B4P23634 1241 aa10.95□□□□□ -0.66
SIM1-201ENST00000262901 R3HDM1Q15032 1099 aaKnown RBP10.95□□□□□ -0.66
SIM1-201ENST00000262901 XDHP47989 1333 aa10.94□□□□□ -0.66
SIM1-201ENST00000262901 KLF18A0A0U1RQI7 1052 aa10.94□□□□□ -0.66
SIM1-201ENST00000262901 PPEF1O14829 653 aaPredicted RBP10.94□□□□□ -0.66
SIM1-201ENST00000262901 CBFA2T2O43439 604 aa10.94□□□□□ -0.66
SIM1-201ENST00000262901 PTGS1P23219 599 aa10.94□□□□□ -0.66
SIM1-201ENST00000262901 HIBADHP31937 336 aaKnown RBP10.94□□□□□ -0.66
SIM1-201ENST00000262901 TYRO3Q06418 890 aa10.94□□□□□ -0.66
SIM1-201ENST00000262901 DHX8Q14562 1220 aaKnown RBP10.94□□□□□ -0.66
SIM1-201ENST00000262901 ICE2Q659A1 982 aa10.94□□□□□ -0.66
SIM1-201ENST00000262901 INTS4Q96HW7 963 aaKnown RBP10.94□□□□□ -0.66
SIM1-201ENST00000262901 IQSEC3Q9UPP2 1182 aaPredicted RBP10.94□□□□□ -0.66
SIM1-201ENST00000262901 LEMD3Q9Y2U8 911 aa10.94□□□□□ -0.66
SIM1-201ENST00000262901 ABCC12Q96J65 1359 aa10.94□□□□□ -0.66
SIM1-201ENST00000262901 TOP1P11387 765 aaKnown RBP10.94□□□□□ -0.66
SIM1-201ENST00000262901 TM4SF1P30408 202 aa10.94□□□□□ -0.66
SIM1-201ENST00000262901 DDR1Q08345 913 aa10.94□□□□□ -0.66
SIM1-201ENST00000262901 ZKSCAN8Q15776 578 aaPredicted RBP10.94□□□□□ -0.66
SIM1-201ENST00000262901 DPP8Q6V1X1 898 aaPredicted RBP10.94□□□□□ -0.66
SIM1-201ENST00000262901 FAM227BQ96M60 508 aa10.94□□□□□ -0.66
SIM1-201ENST00000262901 CCDC129Q6ZRS4 1044 aa10.94□□□□□ -0.66
SIM1-201ENST00000262901 CNNM3Q8NE01 707 aa10.94□□□□□ -0.66
SIM1-201ENST00000262901 ANTXR1Q9H6X2 564 aa10.94□□□□□ -0.66
SIM1-201ENST00000262901 DENND2AQ9ULE3 1009 aa10.94□□□□□ -0.66
SIM1-201ENST00000262901 MINPP1Q9UNW1 487 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms