RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ZNF112Q9UJU3 913 aa15.07■□□□□ 0
TRAF4-202ENST00000262396 MROH7-TTC4A0A0A0MT08 1334 aa15.07■□□□□ 0
TRAF4-202ENST00000262396 MYH13Q9UKX3 1938 aa15.07■□□□□ 0
TRAF4-202ENST00000262396 SLC34A2O95436 690 aa15.06■□□□□ 0
TRAF4-202ENST00000262396 EN2P19622 333 aaPredicted RBP15.06■□□□□ 0
TRAF4-202ENST00000262396 PSMC4P43686 418 aa15.06■□□□□ 0
TRAF4-202ENST00000262396 MECOMQ03112 1051 aa15.06■□□□□ 0
TRAF4-202ENST00000262396 CCDC158Q5M9N0 1113 aa15.06■□□□□ 0
TRAF4-202ENST00000262396 NOL9Q5SY16 702 aaKnown RBP15.06■□□□□ 0
TRAF4-202ENST00000262396 ZFPM1Q8IX07 1006 aa15.06■□□□□ 0
TRAF4-202ENST00000262396 SCYL3Q8IZE3 742 aa15.06■□□□□ 0
TRAF4-202ENST00000262396 TRIM34Q9BYJ4 488 aa15.06■□□□□ 0
TRAF4-202ENST00000262396 PDS5AQ29RF7 1337 aaKnown RBP15.06■□□□□ 0
TRAF4-202ENST00000262396 MTX1Q13505 466 aa15.05■□□□□ -0
TRAF4-202ENST00000262396 ITPRIPQ8IWB1 547 aa15.05■□□□□ -0
TRAF4-202ENST00000262396 SMCR8Q8TEV9 937 aaPredicted RBP15.05■□□□□ -0
TRAF4-202ENST00000262396 SH3TC2Q8TF17 1288 aa15.05■□□□□ -0
TRAF4-202ENST00000262396 ARHGAP39Q9C0H5 1083 aa15.05■□□□□ -0
TRAF4-202ENST00000262396 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.05■□□□□ -0
TRAF4-202ENST00000262396 KCNH4Q9UQ05 1017 aa15.05■□□□□ -0
TRAF4-202ENST00000262396 GAKO14976 1311 aa15.05■□□□□ -0
TRAF4-202ENST00000262396 PDE4DIPQ5VU43 2346 aa15.04■□□□□ -0
TRAF4-202ENST00000262396 BAG3O95817 575 aa15.04■□□□□ -0
TRAF4-202ENST00000262396 FCGRTP55899 365 aa15.04■□□□□ -0
TRAF4-202ENST00000262396 TBC1D9Q6ZT07 1266 aa15.04■□□□□ -0
TRAF4-202ENST00000262396 TEX11Q8IYF3 940 aa15.04■□□□□ -0
TRAF4-202ENST00000262396 TMEM57Q8N5G2 664 aa15.04■□□□□ -0
TRAF4-202ENST00000262396 FAM163AQ96GL9 167 aaPredicted RBP15.04■□□□□ -0
TRAF4-202ENST00000262396 ZNF333Q96JL9 665 aa15.04■□□□□ -0
TRAF4-202ENST00000262396 HMG20BQ9P0W2 317 aa15.04■□□□□ -0
TRAF4-202ENST00000262396 PNMA6EA0A0J9YXQ4 647 aa15.03■□□□□ -0
TRAF4-202ENST00000262396 TRIM75PA6NK02 468 aa15.03■□□□□ -0
TRAF4-202ENST00000262396 CTNND1O60716 968 aaKnown RBP15.03■□□□□ -0
TRAF4-202ENST00000262396 SURF6O75683 361 aaKnown RBP15.03■□□□□ -0
TRAF4-202ENST00000262396 C17orf99Q6UX52 265 aa15.03■□□□□ -0
TRAF4-202ENST00000262396 TRIM47Q96LD4 638 aa15.03■□□□□ -0
TRAF4-202ENST00000262396 TNNQ9UQP3 1299 aa15.03■□□□□ -0
TRAF4-202ENST00000262396 MYPNQ86TC9 1320 aa15.02■□□□□ -0
TRAF4-202ENST00000262396 GPR75-ASB3A0A0A6YYF3 556 aa15.02■□□□□ -0
TRAF4-202ENST00000262396 DDTLA6NHG4 134 aaPredicted RBP15.02■□□□□ -0
TRAF4-202ENST00000262396 MAP4K4O95819 1239 aaPredicted RBP15.02■□□□□ -0
TRAF4-202ENST00000262396 CYP2C8P10632 490 aa15.02■□□□□ -0
TRAF4-202ENST00000262396 PTPRAP18433 802 aa15.02■□□□□ -0
TRAF4-202ENST00000262396 UBXN2AP68543 259 aa15.02■□□□□ -0
TRAF4-202ENST00000262396 NAA16Q6N069 864 aaPredicted RBP15.02■□□□□ -0
TRAF4-202ENST00000262396 SNRKQ9NRH2 765 aa15.02■□□□□ -0
TRAF4-202ENST00000262396 SRRDQ9UH36 339 aa15.02■□□□□ -0
TRAF4-202ENST00000262396 TAOK2Q9UL54 1235 aa15.02■□□□□ -0
TRAF4-202ENST00000262396 ZBTB22O15209 634 aa15.01□□□□□ -0.01
TRAF4-202ENST00000262396 PLCG2P16885 1265 aa15.01□□□□□ -0.01
TRAF4-202ENST00000262396 PI16Q6UXB8 463 aa15.01□□□□□ -0.01
TRAF4-202ENST00000262396 NSUN4Q96CB9 384 aaKnown RBP15.01□□□□□ -0.01
TRAF4-202ENST00000262396 DDX4Q9NQI0 724 aaKnown RBP15.01□□□□□ -0.01
TRAF4-202ENST00000262396 PNMA3Q9UL41 463 aa15.01□□□□□ -0.01
TRAF4-202ENST00000262396 A0A0G2JLL6 359 aaPredicted RBP15□□□□□ -0.01
TRAF4-202ENST00000262396 PHF20L1A8MW92 1017 aa15□□□□□ -0.01
TRAF4-202ENST00000262396 OSBPP22059 807 aa15□□□□□ -0.01
TRAF4-202ENST00000262396 ARID4AP29374 1257 aaPredicted RBP15□□□□□ -0.01
TRAF4-202ENST00000262396 GRK4P32298 578 aa15□□□□□ -0.01
TRAF4-202ENST00000262396 CAP1Q01518 475 aa15□□□□□ -0.01
TRAF4-202ENST00000262396 PABPC4Q13310 644 aaKnown RBP eCLIP15□□□□□ -0.01
TRAF4-202ENST00000262396 TNNI3KQ59H18 835 aa15□□□□□ -0.01
TRAF4-202ENST00000262396 SH3BP5LQ7L8J4 393 aa15□□□□□ -0.01
TRAF4-202ENST00000262396 PRRT2Q7Z6L0 340 aaPredicted RBP15□□□□□ -0.01
TRAF4-202ENST00000262396 CRACR2BQ8N4Y2 399 aaPredicted RBP15□□□□□ -0.01
TRAF4-202ENST00000262396 C1orf115Q9H7X2 142 aa15□□□□□ -0.01
TRAF4-202ENST00000262396 AFG3L2Q9Y4W6 797 aa15□□□□□ -0.01
TRAF4-202ENST00000262396 FPGT-TNNI3KV9GXZ4 949 aa15□□□□□ -0.01
TRAF4-202ENST00000262396 FAM196BA6NMK8 535 aa14.99□□□□□ -0.01
TRAF4-202ENST00000262396 TNPO2O14787 897 aaKnown RBP14.99□□□□□ -0.01
TRAF4-202ENST00000262396 MCAMP43121 646 aa14.99□□□□□ -0.01
TRAF4-202ENST00000262396 ATP8B2P98198 1209 aa14.99□□□□□ -0.01
TRAF4-202ENST00000262396 NKX2-3Q8TAU0 364 aa14.99□□□□□ -0.01
TRAF4-202ENST00000262396 OSBPL5Q9H0X9 879 aaPredicted RBP14.99□□□□□ -0.01
TRAF4-202ENST00000262396 BCL11AQ9H165 835 aa14.99□□□□□ -0.01
TRAF4-202ENST00000262396 AS3MTQ9HBK9 375 aa14.99□□□□□ -0.01
TRAF4-202ENST00000262396 AATFQ9NY61 560 aaKnown RBP eCLIP14.99□□□□□ -0.01
TRAF4-202ENST00000262396 LAMB1P07942 1786 aa14.98□□□□□ -0.01
TRAF4-202ENST00000262396 MYH2Q9UKX2 1941 aa14.98□□□□□ -0.01
TRAF4-202ENST00000262396 TBC1D12O60347 775 aa14.98□□□□□ -0.01
TRAF4-202ENST00000262396 RHBDL3P58872 404 aa14.98□□□□□ -0.01
TRAF4-202ENST00000262396 DIEXFQ68CQ4 756 aaKnown RBP14.98□□□□□ -0.01
TRAF4-202ENST00000262396 GPAT2Q6NUI2 795 aa14.98□□□□□ -0.01
TRAF4-202ENST00000262396 COA7Q96BR5 231 aa14.98□□□□□ -0.01
TRAF4-202ENST00000262396 DBNDD2Q9BQY9 259 aa14.98□□□□□ -0.01
TRAF4-202ENST00000262396 RNF208Q9H0X6 261 aa14.98□□□□□ -0.01
TRAF4-202ENST00000262396 GPR108Q9NPR9 543 aa14.98□□□□□ -0.01
TRAF4-202ENST00000262396 SLC45A1Q9Y2W3 748 aa14.98□□□□□ -0.01
TRAF4-202ENST00000262396 USP17L5A8MUK1 530 aa14.97□□□□□ -0.01
TRAF4-202ENST00000262396 NPM3O75607 178 aaKnown RBP14.97□□□□□ -0.01
TRAF4-202ENST00000262396 HLA-DOAP06340 250 aa14.97□□□□□ -0.01
TRAF4-202ENST00000262396 PRKCZQ05513 592 aa14.97□□□□□ -0.01
TRAF4-202ENST00000262396 SPP2Q13103 211 aa14.97□□□□□ -0.01
TRAF4-202ENST00000262396 CCDC84Q86UT8 332 aaPredicted RBP14.97□□□□□ -0.01
TRAF4-202ENST00000262396 MAPKAPK5Q8IW41 473 aa14.97□□□□□ -0.01
TRAF4-202ENST00000262396 ZNF280CQ8ND82 737 aa14.97□□□□□ -0.01
TRAF4-202ENST00000262396 SLAIN1Q8ND83 568 aa14.97□□□□□ -0.01
TRAF4-202ENST00000262396 SH3RF3Q8TEJ3 882 aaPredicted RBP14.97□□□□□ -0.01
TRAF4-202ENST00000262396 DPF3Q92784 378 aa14.97□□□□□ -0.01
TRAF4-202ENST00000262396 TBC1D2Q9BYX2 928 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms