RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 IL17RAQ96F46 866 aa22.15■■□□□ 1.14
COL4A3BP-201ENST00000261415 FOCADQ5VW36 1801 aa22.15■■□□□ 1.14
COL4A3BP-201ENST00000261415 ECM29Q5VYK3 1845 aa22.15■■□□□ 1.14
COL4A3BP-201ENST00000261415 MAGEB6P1A0A0J9YX57 407 aa22.15■■□□□ 1.14
COL4A3BP-201ENST00000261415 NFKBIEO00221 500 aa22.15■■□□□ 1.14
COL4A3BP-201ENST00000261415 LARGE2Q8N3Y3 721 aa22.15■■□□□ 1.14
COL4A3BP-201ENST00000261415 CERS5Q8N5B7 392 aa22.15■■□□□ 1.14
COL4A3BP-201ENST00000261415 SNX14Q9Y5W7 946 aa22.15■■□□□ 1.14
COL4A3BP-201ENST00000261415 SBF1O95248 1867 aa22.15■■□□□ 1.14
COL4A3BP-201ENST00000261415 KCNB2Q92953 911 aa22.14■■□□□ 1.14
COL4A3BP-201ENST00000261415 RIOK1Q9BRS2 568 aaKnown RBP22.14■■□□□ 1.14
COL4A3BP-201ENST00000261415 YDJCA8MPS7 323 aa22.14■■□□□ 1.13
COL4A3BP-201ENST00000261415 SLC27A2O14975 620 aa22.14■■□□□ 1.13
COL4A3BP-201ENST00000261415 IARSP41252 1262 aaKnown RBP22.14■■□□□ 1.13
COL4A3BP-201ENST00000261415 FAM193AP78312 1265 aa22.14■■□□□ 1.13
COL4A3BP-201ENST00000261415 GSTO1P78417 241 aa22.14■■□□□ 1.13
COL4A3BP-201ENST00000261415 STRIP1Q5VSL9 837 aa22.14■■□□□ 1.13
COL4A3BP-201ENST00000261415 MXD3Q9BW11 206 aa22.14■■□□□ 1.13
COL4A3BP-201ENST00000261415 CWC22Q9HCG8 908 aaKnown RBP22.14■■□□□ 1.13
COL4A3BP-201ENST00000261415 SUGT1Q9Y2Z0 365 aa22.14■■□□□ 1.13
COL4A3BP-201ENST00000261415 LAMB1P07942 1786 aa22.13■■□□□ 1.13
COL4A3BP-201ENST00000261415 CTIFO43310 598 aaKnown RBP22.13■■□□□ 1.13
COL4A3BP-201ENST00000261415 MBD3O95983 291 aa22.13■■□□□ 1.13
COL4A3BP-201ENST00000261415 DIXDC1Q155Q3 683 aa22.13■■□□□ 1.13
COL4A3BP-201ENST00000261415 RNF20Q5VTR2 975 aa22.13■■□□□ 1.13
COL4A3BP-201ENST00000261415 CALCOCO1Q9P1Z2 691 aa22.13■■□□□ 1.13
COL4A3BP-201ENST00000261415 NAV1Q8NEY1 1877 aa22.13■■□□□ 1.13
COL4A3BP-201ENST00000261415 CD2BP2O95400 341 aaKnown RBP22.13■■□□□ 1.13
COL4A3BP-201ENST00000261415 RABEP1Q15276 862 aa22.13■■□□□ 1.13
COL4A3BP-201ENST00000261415 SYCP1Q15431 976 aa22.13■■□□□ 1.13
COL4A3BP-201ENST00000261415 UTRNP46939 3433 aa22.12■■□□□ 1.13
COL4A3BP-201ENST00000261415 USP17L3A6NCW0 530 aa22.12■■□□□ 1.13
COL4A3BP-201ENST00000261415 USP17L4A6NCW7 530 aa22.12■■□□□ 1.13
COL4A3BP-201ENST00000261415 SLFN14P0C7P3 912 aa22.12■■□□□ 1.13
COL4A3BP-201ENST00000261415 DYNLL1P63167 89 aaKnown RBP22.12■■□□□ 1.13
COL4A3BP-201ENST00000261415 DACT2Q5SW24 774 aa22.12■■□□□ 1.13
COL4A3BP-201ENST00000261415 USP17L1Q7RTZ2 530 aa22.12■■□□□ 1.13
COL4A3BP-201ENST00000261415 GPT2Q8TD30 523 aa22.12■■□□□ 1.13
COL4A3BP-201ENST00000261415 ZFP91Q96JP5 570 aaPredicted RBP22.12■■□□□ 1.13
COL4A3BP-201ENST00000261415 SYT17Q9BSW7 474 aa22.12■■□□□ 1.13
COL4A3BP-201ENST00000261415 LTBP3Q9NS15 1303 aa22.12■■□□□ 1.13
COL4A3BP-201ENST00000261415 SYCE3A1L190 88 aa22.11■■□□□ 1.13
COL4A3BP-201ENST00000261415 PRPF40AO75400 957 aaKnown RBP22.11■■□□□ 1.13
COL4A3BP-201ENST00000261415 ZKSCAN1P17029 563 aaPredicted RBP22.11■■□□□ 1.13
COL4A3BP-201ENST00000261415 GNAT2P19087 354 aa22.11■■□□□ 1.13
COL4A3BP-201ENST00000261415 UVSSAQ2YD98 709 aa22.11■■□□□ 1.13
COL4A3BP-201ENST00000261415 AATFQ9NY61 560 aaKnown RBP eCLIP22.11■■□□□ 1.13
COL4A3BP-201ENST00000261415 MROH7-TTC4A0A0A0MT08 1334 aa22.11■■□□□ 1.13
COL4A3BP-201ENST00000261415 FGAP02671 866 aa22.11■■□□□ 1.13
COL4A3BP-201ENST00000261415 CYP21A2P08686 494 aa22.11■■□□□ 1.13
COL4A3BP-201ENST00000261415 FKBP1AP62942 108 aaKnown RBP22.11■■□□□ 1.13
COL4A3BP-201ENST00000261415 SLC4A4Q9Y6R1 1079 aa22.11■■□□□ 1.13
COL4A3BP-201ENST00000261415 PATL2C9JE40 543 aaKnown RBP22.1■■□□□ 1.13
COL4A3BP-201ENST00000261415 APPP05067 770 aa22.1■■□□□ 1.13
COL4A3BP-201ENST00000261415 LDHCP07864 332 aa22.1■■□□□ 1.13
COL4A3BP-201ENST00000261415 TULP2O00295 520 aa22.1■■□□□ 1.13
COL4A3BP-201ENST00000261415 PRKAB2O43741 272 aa22.1■■□□□ 1.13
COL4A3BP-201ENST00000261415 NIM1KQ8IY84 436 aa22.1■■□□□ 1.13
COL4A3BP-201ENST00000261415 TSPY26PQ9H489 355 aa22.1■■□□□ 1.13
COL4A3BP-201ENST00000261415 CTNNA3Q9UI47 895 aa22.1■■□□□ 1.13
COL4A3BP-201ENST00000261415 TAF6LQ9Y6J9 622 aa22.1■■□□□ 1.13
COL4A3BP-201ENST00000261415 GSG1L2A8MUP6 293 aa22.09■■□□□ 1.13
COL4A3BP-201ENST00000261415 F8W031 263 aaPredicted RBP22.09■■□□□ 1.13
COL4A3BP-201ENST00000261415 SLF2Q8IX21 1173 aa22.09■■□□□ 1.13
COL4A3BP-201ENST00000261415 FAM184AQ8NB25 1140 aa22.09■■□□□ 1.13
COL4A3BP-201ENST00000261415 EPB41L4AQ9HCS5 686 aaPredicted RBP22.09■■□□□ 1.13
COL4A3BP-201ENST00000261415 TMEM63CQ9P1W3 806 aa22.09■■□□□ 1.13
COL4A3BP-201ENST00000261415 TTF2Q9UNY4 1162 aaKnown RBP22.09■■□□□ 1.13
COL4A3BP-201ENST00000261415 MYH1P12882 1939 aa22.09■■□□□ 1.13
COL4A3BP-201ENST00000261415 RBM27Q9P2N5 1060 aaKnown RBP22.09■■□□□ 1.13
COL4A3BP-201ENST00000261415 ZMYM6O95789 1325 aa22.08■■□□□ 1.13
COL4A3BP-201ENST00000261415 RASSF7Q02833 373 aa22.08■■□□□ 1.13
COL4A3BP-201ENST00000261415 ADCK5Q3MIX3 580 aa22.08■■□□□ 1.13
COL4A3BP-201ENST00000261415 TSGA10IPQ3SY00 556 aa22.08■■□□□ 1.13
COL4A3BP-201ENST00000261415 CREBRFQ8IUR6 639 aa22.08■■□□□ 1.13
COL4A3BP-201ENST00000261415 IFNL3Q8IZI9 196 aa22.08■■□□□ 1.13
COL4A3BP-201ENST00000261415 RPAP1Q9BWH6 1393 aaPredicted RBP22.08■■□□□ 1.13
COL4A3BP-201ENST00000261415 GAKO14976 1311 aa22.08■■□□□ 1.12
COL4A3BP-201ENST00000261415 ALX1Q15699 326 aa22.08■■□□□ 1.12
COL4A3BP-201ENST00000261415 RGS22Q8NE09 1264 aa22.08■■□□□ 1.12
COL4A3BP-201ENST00000261415 SDR42E1Q8WUS8 393 aa22.08■■□□□ 1.12
COL4A3BP-201ENST00000261415 FAM163AQ96GL9 167 aaPredicted RBP22.08■■□□□ 1.12
COL4A3BP-201ENST00000261415 ZNRF3Q9ULT6 936 aa22.08■■□□□ 1.12
COL4A3BP-201ENST00000261415 TIAM2Q8IVF5 1701 aa22.07■■□□□ 1.12
COL4A3BP-201ENST00000261415 SYAP1Q96A49 352 aaPredicted RBP22.07■■□□□ 1.12
COL4A3BP-201ENST00000261415 DDX60LQ5H9U9 1706 aaKnown RBP22.07■■□□□ 1.12
COL4A3BP-201ENST00000261415 BAG3O95817 575 aa22.06■■□□□ 1.12
COL4A3BP-201ENST00000261415 IMMTQ16891 758 aaKnown RBP22.06■■□□□ 1.12
COL4A3BP-201ENST00000261415 NOL10Q9BSC4 688 aaKnown RBP22.06■■□□□ 1.12
COL4A3BP-201ENST00000261415 NACAP1Q9BZK3 213 aa22.06■■□□□ 1.12
COL4A3BP-201ENST00000261415 NAPBQ9H115 298 aa22.06■■□□□ 1.12
COL4A3BP-201ENST00000261415 GPR75-ASB3A0A0A6YYF3 556 aa22.06■■□□□ 1.12
COL4A3BP-201ENST00000261415 PPP4CP60510 307 aa22.06■■□□□ 1.12
COL4A3BP-201ENST00000261415 KIAA0825Q8IV33 1275 aa22.06■■□□□ 1.12
COL4A3BP-201ENST00000261415 JAKMIP1Q96N16 626 aaKnown RBP22.06■■□□□ 1.12
COL4A3BP-201ENST00000261415 UPF3BQ9BZI7 483 aaKnown RBP22.06■■□□□ 1.12
COL4A3BP-201ENST00000261415 RAD17O75943 681 aa22.05■■□□□ 1.12
COL4A3BP-201ENST00000261415 BTDP43251 543 aa22.05■■□□□ 1.12
COL4A3BP-201ENST00000261415 TERF2Q15554 542 aa22.05■■□□□ 1.12
COL4A3BP-201ENST00000261415 RNF214Q8ND24 703 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms