RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 LARGE2Q8N3Y3 721 aa20.73■□□□□ 0.91
SSB-201ENST00000260956 ZNF784Q8NCA9 323 aaPredicted RBP20.73■□□□□ 0.91
SSB-201ENST00000260956 NCOA7Q8NI08 942 aa20.73■□□□□ 0.91
SSB-201ENST00000260956 ZNF526Q8TF50 670 aaPredicted RBP20.73■□□□□ 0.91
SSB-201ENST00000260956 DDX11Q96FC9 970 aa20.73■□□□□ 0.91
SSB-201ENST00000260956 GGA1Q9UJY5 639 aa20.73■□□□□ 0.91
SSB-201ENST00000260956 BCAMP50895 628 aa20.73■□□□□ 0.91
SSB-201ENST00000260956 TACC3Q9Y6A5 838 aa20.73■□□□□ 0.91
SSB-201ENST00000260956 ZNF541Q9H0D2 1346 aa20.72■□□□□ 0.91
SSB-201ENST00000260956 FZD9O00144 591 aa20.72■□□□□ 0.91
SSB-201ENST00000260956 ZNF213O14771 459 aa20.72■□□□□ 0.91
SSB-201ENST00000260956 CCT2P78371 535 aaKnown RBP20.72■□□□□ 0.91
SSB-201ENST00000260956 FGD1P98174 961 aa20.72■□□□□ 0.91
SSB-201ENST00000260956 SCAND2PQ9GZW5 306 aaPredicted RBP20.72■□□□□ 0.91
SSB-201ENST00000260956 MAST2Q6P0Q8 1798 aa20.71■□□□□ 0.91
SSB-201ENST00000260956 IRS2Q9Y4H2 1338 aa20.71■□□□□ 0.91
SSB-201ENST00000260956 YDJCA8MPS7 323 aa20.71■□□□□ 0.91
SSB-201ENST00000260956 CYB5R4Q7L1T6 521 aa20.71■□□□□ 0.91
SSB-201ENST00000260956 SUPT20HQ8NEM7 779 aa20.71■□□□□ 0.91
SSB-201ENST00000260956 ZSCAN16Q9H4T2 348 aaPredicted RBP20.71■□□□□ 0.91
SSB-201ENST00000260956 KCNQ5Q9NR82 932 aa20.71■□□□□ 0.91
SSB-201ENST00000260956 NEDD4P46934 1319 aa20.7■□□□□ 0.9
SSB-201ENST00000260956 DICER1Q9UPY3 1922 aaKnown RBP20.7■□□□□ 0.9
SSB-201ENST00000260956 LETM1O95202 739 aaPredicted RBP20.7■□□□□ 0.9
SSB-201ENST00000260956 MAP3K12Q12852 859 aa20.7■□□□□ 0.9
SSB-201ENST00000260956 DOK7Q18PE1 504 aa20.7■□□□□ 0.9
SSB-201ENST00000260956 MAGEB6Q8N7X4 407 aa20.7■□□□□ 0.9
SSB-201ENST00000260956 PGBD1Q96JS3 809 aa20.7■□□□□ 0.9
SSB-201ENST00000260956 MBD4O95243 580 aa20.7■□□□□ 0.9
SSB-201ENST00000260956 ATP2B4P23634 1241 aa20.7■□□□□ 0.9
SSB-201ENST00000260956 DBNDD1Q9H9R9 158 aa20.7■□□□□ 0.9
SSB-201ENST00000260956 MYH13Q9UKX3 1938 aa20.69■□□□□ 0.9
SSB-201ENST00000260956 NID2Q14112 1375 aa20.69■□□□□ 0.9
SSB-201ENST00000260956 GSG1L2A8MUP6 293 aa20.69■□□□□ 0.9
SSB-201ENST00000260956 SH2B2O14492 632 aaPredicted RBP20.69■□□□□ 0.9
SSB-201ENST00000260956 ZBTB22O15209 634 aa20.69■□□□□ 0.9
SSB-201ENST00000260956 DDNO94850 711 aaPredicted RBP20.69■□□□□ 0.9
SSB-201ENST00000260956 LIG1P18858 919 aa20.69■□□□□ 0.9
SSB-201ENST00000260956 UBE4AQ14139 1066 aa20.69■□□□□ 0.9
SSB-201ENST00000260956 ANKRD2Q9GZV1 360 aa20.69■□□□□ 0.9
SSB-201ENST00000260956 VPS33BQ9H267 617 aa20.69■□□□□ 0.9
SSB-201ENST00000260956 KLF18A0A0U1RQI7 1052 aa20.68■□□□□ 0.9
SSB-201ENST00000260956 PATL2C9JE40 543 aaKnown RBP20.68■□□□□ 0.9
SSB-201ENST00000260956 RBM43Q6ZSC3 357 aaKnown RBP20.68■□□□□ 0.9
SSB-201ENST00000260956 RGS22Q8NE09 1264 aa20.68■□□□□ 0.9
SSB-201ENST00000260956 JDP2Q8WYK2 163 aa20.68■□□□□ 0.9
SSB-201ENST00000260956 CHMP4CQ96CF2 233 aa20.68■□□□□ 0.9
SSB-201ENST00000260956 LEMD3Q9Y2U8 911 aa20.68■□□□□ 0.9
SSB-201ENST00000260956 GLTPD2A6NH11 291 aa20.67■□□□□ 0.9
SSB-201ENST00000260956 RALYLQ86SE5 291 aaKnown RBP20.67■□□□□ 0.9
SSB-201ENST00000260956 IFNL3Q8IZI9 196 aa20.67■□□□□ 0.9
SSB-201ENST00000260956 FAM184AQ8NB25 1140 aa20.67■□□□□ 0.9
SSB-201ENST00000260956 AIDAQ96BJ3 306 aa20.67■□□□□ 0.9
SSB-201ENST00000260956 ZC3H12CQ9C0D7 883 aaKnown RBP20.67■□□□□ 0.9
SSB-201ENST00000260956 TFIP11Q9UBB9 837 aaKnown RBP20.67■□□□□ 0.9
SSB-201ENST00000260956 ZC3H4Q9UPT8 1303 aaKnown RBP20.67■□□□□ 0.9
SSB-201ENST00000260956 GOLGA8BA8MQT2 603 aa20.67■□□□□ 0.9
SSB-201ENST00000260956 NIM1KQ8IY84 436 aa20.67■□□□□ 0.9
SSB-201ENST00000260956 LCORLQ8N3X6 602 aa20.67■□□□□ 0.9
SSB-201ENST00000260956 SPATA32Q96LK8 384 aa20.67■□□□□ 0.9
SSB-201ENST00000260956 ARMT1Q9H993 441 aa20.67■□□□□ 0.9
SSB-201ENST00000260956 NMRK2Q9NPI5 230 aa20.67■□□□□ 0.9
SSB-201ENST00000260956 ZNRF3Q9ULT6 936 aa20.67■□□□□ 0.9
SSB-201ENST00000260956 ANGEL1Q9UNK9 670 aaKnown RBP20.67■□□□□ 0.9
SSB-201ENST00000260956 KIF3AQ9Y496 699 aa20.67■□□□□ 0.9
SSB-201ENST00000260956 ESPNB1AK53 854 aa20.66■□□□□ 0.9
SSB-201ENST00000260956 POTECB2RU33 542 aa20.66■□□□□ 0.9
SSB-201ENST00000260956 CXCL9Q07325 125 aa20.66■□□□□ 0.9
SSB-201ENST00000260956 IGDCC4Q8TDY8 1250 aa20.66■□□□□ 0.9
SSB-201ENST00000260956 RCOR1Q9UKL0 485 aa20.66■□□□□ 0.9
SSB-201ENST00000260956 PDS5AQ29RF7 1337 aaKnown RBP20.65■□□□□ 0.9
SSB-201ENST00000260956 H3BQV1 296 aa20.65■□□□□ 0.9
SSB-201ENST00000260956 CLCN1P35523 988 aa20.65■□□□□ 0.9
SSB-201ENST00000260956 HS1BP3Q53T59 392 aa20.65■□□□□ 0.9
SSB-201ENST00000260956 IFFO2Q5TF58 517 aa20.65■□□□□ 0.9
SSB-201ENST00000260956 ADGRA1Q86SQ6 560 aa20.65■□□□□ 0.9
SSB-201ENST00000260956 SGMS1Q86VZ5 419 aa20.65■□□□□ 0.9
SSB-201ENST00000260956 RNF214Q8ND24 703 aa20.65■□□□□ 0.9
SSB-201ENST00000260956 EYA3Q99504 573 aa20.65■□□□□ 0.9
SSB-201ENST00000260956 SENP2Q9HC62 589 aa20.65■□□□□ 0.9
SSB-201ENST00000260956 ECE2O60344 883 aa20.64■□□□□ 0.9
SSB-201ENST00000260956 RAD17O75943 681 aa20.64■□□□□ 0.9
SSB-201ENST00000260956 UVSSAQ2YD98 709 aa20.64■□□□□ 0.9
SSB-201ENST00000260956 ATL3Q6DD88 541 aa20.64■□□□□ 0.9
SSB-201ENST00000260956 FBXO33Q7Z6M2 555 aa20.64■□□□□ 0.9
SSB-201ENST00000260956 ZNF384Q8TF68 577 aa20.64■□□□□ 0.9
SSB-201ENST00000260956 B4E1Z4 1266 aa20.64■□□□□ 0.89
SSB-201ENST00000260956 PRKAB2O43741 272 aa20.64■□□□□ 0.89
SSB-201ENST00000260956 GYG1P46976 350 aa20.64■□□□□ 0.89
SSB-201ENST00000260956 GIMAP6Q6P9H5 292 aa20.64■□□□□ 0.89
SSB-201ENST00000260956 TMEM87BQ96K49 555 aa20.64■□□□□ 0.89
SSB-201ENST00000260956 FAM84BQ96KN1 310 aaPredicted RBP20.64■□□□□ 0.89
SSB-201ENST00000260956 LY9Q9HBG7 655 aa20.64■□□□□ 0.89
SSB-201ENST00000260956 GNAT2P19087 354 aa20.63■□□□□ 0.89
SSB-201ENST00000260956 APOA5Q6Q788 366 aa20.63■□□□□ 0.89
SSB-201ENST00000260956 STAG1Q8WVM7 1258 aa20.63■□□□□ 0.89
SSB-201ENST00000260956 LAMB1P07942 1786 aa20.63■□□□□ 0.89
SSB-201ENST00000260956 SCN9AQ15858 1988 aa20.62■□□□□ 0.89
SSB-201ENST00000260956 C15orf52Q6ZUT6 534 aaKnown RBP20.62■□□□□ 0.89
SSB-201ENST00000260956 USP28Q96RU2 1077 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms