RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 ADGRG1Q9Y653 693 aa23.31■■□□□ 1.32
RARA-201ENST00000254066 CCDC196A0A1B0GTZ2 297 aa23.31■■□□□ 1.32
RARA-201ENST00000254066 CTAGE15A4D2H0 777 aa23.31■■□□□ 1.32
RARA-201ENST00000254066 KIF1CO43896 1103 aaKnown RBP23.31■■□□□ 1.32
RARA-201ENST00000254066 CTAGE8P0CG41 777 aa23.31■■□□□ 1.32
RARA-201ENST00000254066 ZNF18P17022 549 aa23.31■■□□□ 1.32
RARA-201ENST00000254066 VSNL1P62760 191 aa23.31■■□□□ 1.32
RARA-201ENST00000254066 CTAGE6Q86UF2 777 aa23.31■■□□□ 1.32
RARA-201ENST00000254066 CTAGE4Q8IX94 777 aa23.31■■□□□ 1.32
RARA-201ENST00000254066 SUCLG2Q96I99 432 aa23.31■■□□□ 1.32
RARA-201ENST00000254066 MYO1AQ9UBC5 1043 aa23.31■■□□□ 1.32
RARA-201ENST00000254066 DACH1Q9UI36 760 aa23.31■■□□□ 1.32
RARA-201ENST00000254066 TACO1Q9BSH4 297 aaKnown RBP23.3■■□□□ 1.32
RARA-201ENST00000254066 ZSWIM4Q9H7M6 989 aa23.3■■□□□ 1.32
RARA-201ENST00000254066 CEP83Q9Y592 693 aa23.3■■□□□ 1.32
RARA-201ENST00000254066 SHOX2O60902 331 aaPredicted RBP23.3■■□□□ 1.32
RARA-201ENST00000254066 DDX17Q92841 729 aaKnown RBP23.3■■□□□ 1.32
RARA-201ENST00000254066 KAZALD1Q96I82 304 aa23.3■■□□□ 1.32
RARA-201ENST00000254066 CXorf56Q9H5V9 222 aa23.3■■□□□ 1.32
RARA-201ENST00000254066 MAP3K15Q6ZN16 1313 aa23.29■■□□□ 1.32
RARA-201ENST00000254066 AKR1B15C9JRZ8 316 aaPredicted RBP23.29■■□□□ 1.32
RARA-201ENST00000254066 PRPF6O94906 941 aaKnown RBP23.29■■□□□ 1.32
RARA-201ENST00000254066 ADKP55263 362 aaKnown RBP23.29■■□□□ 1.32
RARA-201ENST00000254066 MAP9Q49MG5 647 aa23.29■■□□□ 1.32
RARA-201ENST00000254066 ENOX1Q8TC92 643 aaKnown RBP23.29■■□□□ 1.32
RARA-201ENST00000254066 HELLSQ9NRZ9 838 aa23.29■■□□□ 1.32
RARA-201ENST00000254066 KIF1AQ12756 1690 aa23.29■■□□□ 1.32
RARA-201ENST00000254066 MROH7-TTC4A0A0A0MT08 1334 aa23.29■■□□□ 1.32
RARA-201ENST00000254066 RNF40O75150 1001 aa23.29■■□□□ 1.32
RARA-201ENST00000254066 ERLIN2O94905 339 aa23.29■■□□□ 1.32
RARA-201ENST00000254066 POLR3DP05423 398 aaPredicted RBP23.29■■□□□ 1.32
RARA-201ENST00000254066 ISM2Q6H9L7 571 aa23.29■■□□□ 1.32
RARA-201ENST00000254066 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.29■■□□□ 1.32
RARA-201ENST00000254066 DONSONQ9NYP3 566 aa23.29■■□□□ 1.32
RARA-201ENST00000254066 RAI14Q9P0K7 980 aa23.29■■□□□ 1.32
RARA-201ENST00000254066 HOOK1Q9UJC3 728 aaKnown RBP23.29■■□□□ 1.32
RARA-201ENST00000254066 KIF4BQ2VIQ3 1234 aa23.28■■□□□ 1.32
RARA-201ENST00000254066 RASGRP2Q7LDG7 609 aa23.28■■□□□ 1.32
RARA-201ENST00000254066 MICALL1Q8N3F8 863 aa23.28■■□□□ 1.32
RARA-201ENST00000254066 GPATCH11Q8N954 259 aa23.28■■□□□ 1.32
RARA-201ENST00000254066 NUTM2BA6NNL0 878 aaPredicted RBP23.28■■□□□ 1.32
RARA-201ENST00000254066 NUTM2EB1AL46 878 aaPredicted RBP23.28■■□□□ 1.32
RARA-201ENST00000254066 SART3Q15020 963 aaKnown RBP23.28■■□□□ 1.32
RARA-201ENST00000254066 NUTM2AQ8IVF1 878 aaPredicted RBP23.28■■□□□ 1.32
RARA-201ENST00000254066 HAUS7Q99871 368 aa23.28■■□□□ 1.32
RARA-201ENST00000254066 DESI2Q9BSY9 194 aa23.28■■□□□ 1.32
RARA-201ENST00000254066 TTF2Q9UNY4 1162 aaKnown RBP23.28■■□□□ 1.32
RARA-201ENST00000254066 LRRIQ3A6PVS8 624 aaPredicted RBP23.27■■□□□ 1.32
RARA-201ENST00000254066 E7EWF7 191 aa23.27■■□□□ 1.32
RARA-201ENST00000254066 CCDC102BQ68D86 513 aa23.27■■□□□ 1.32
RARA-201ENST00000254066 CCDC129Q6ZRS4 1044 aa23.27■■□□□ 1.32
RARA-201ENST00000254066 MLKLQ8NB16 471 aa23.27■■□□□ 1.32
RARA-201ENST00000254066 SUGCTQ9HAC7 445 aa23.27■■□□□ 1.32
RARA-201ENST00000254066 ATP6V1AP38606 617 aa23.27■■□□□ 1.31
RARA-201ENST00000254066 POTEDQ86YR6 584 aa23.27■■□□□ 1.31
RARA-201ENST00000254066 ANKRD20A12PQ8NF67 263 aa23.27■■□□□ 1.31
RARA-201ENST00000254066 PALLDQ8WX93 1383 aa23.26■■□□□ 1.31
RARA-201ENST00000254066 SYF2O95926 243 aaKnown RBP23.26■■□□□ 1.31
RARA-201ENST00000254066 SATB1Q01826 763 aa23.26■■□□□ 1.31
RARA-201ENST00000254066 KIF23Q02241 960 aaPredicted RBP23.26■■□□□ 1.31
RARA-201ENST00000254066 PNOCQ13519 176 aa23.26■■□□□ 1.31
RARA-201ENST00000254066 NR1I3Q14994 352 aa23.26■■□□□ 1.31
RARA-201ENST00000254066 RESP18Q5W5W9 173 aa23.26■■□□□ 1.31
RARA-201ENST00000254066 EDC3Q96F86 508 aaKnown RBP23.26■■□□□ 1.31
RARA-201ENST00000254066 MAP2K2P36507 400 aa23.25■■□□□ 1.31
RARA-201ENST00000254066 SF3B2Q13435 895 aaKnown RBP23.25■■□□□ 1.31
RARA-201ENST00000254066 NAPGQ99747 312 aaPredicted RBP23.25■■□□□ 1.31
RARA-201ENST00000254066 COL22A1Q8NFW1 1626 aaPredicted RBP23.25■■□□□ 1.31
RARA-201ENST00000254066 ZNF569Q5MCW4 686 aa23.25■■□□□ 1.31
RARA-201ENST00000254066 KBTBD3Q8NAB2 608 aa23.25■■□□□ 1.31
RARA-201ENST00000254066 IRX2Q9BZI1 471 aaPredicted RBP23.25■■□□□ 1.31
RARA-201ENST00000254066 PXDNQ92626 1479 aa23.25■■□□□ 1.31
RARA-201ENST00000254066 RHOXF2BP0C7M4 288 aa23.24■■□□□ 1.31
RARA-201ENST00000254066 CT47A1Q5JQC4 288 aaPredicted RBP23.24■■□□□ 1.31
RARA-201ENST00000254066 METTL16Q86W50 562 aaKnown RBP23.24■■□□□ 1.31
RARA-201ENST00000254066 CCDC51Q96ER9 411 aa23.24■■□□□ 1.31
RARA-201ENST00000254066 RHOXF2Q9BQY4 288 aa23.24■■□□□ 1.31
RARA-201ENST00000254066 LZTFL1Q9NQ48 299 aa23.24■■□□□ 1.31
RARA-201ENST00000254066 A1CFQ9NQ94 594 aaKnown RBP23.24■■□□□ 1.31
RARA-201ENST00000254066 FECHP22830 423 aa23.24■■□□□ 1.31
RARA-201ENST00000254066 TEFQ10587 303 aa23.24■■□□□ 1.31
RARA-201ENST00000254066 WWC2Q6AWC2 1192 aa23.24■■□□□ 1.31
RARA-201ENST00000254066 SHC4Q6S5L8 630 aa23.24■■□□□ 1.31
RARA-201ENST00000254066 TRIML1Q8N9V2 468 aa23.24■■□□□ 1.31
RARA-201ENST00000254066 COPRSQ9NQ92 184 aa23.24■■□□□ 1.31
RARA-201ENST00000254066 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.24■■□□□ 1.31
RARA-201ENST00000254066 DBNLQ9UJU6 430 aaKnown RBP23.24■■□□□ 1.31
RARA-201ENST00000254066 PCDHA5Q9Y5H7 936 aa23.24■■□□□ 1.31
RARA-201ENST00000254066 A0A1B0GTH6 734 aa23.23■■□□□ 1.31
RARA-201ENST00000254066 PHACTR2O75167 634 aa23.23■■□□□ 1.31
RARA-201ENST00000254066 E2F4Q16254 413 aa23.23■■□□□ 1.31
RARA-201ENST00000254066 CWF19L2Q2TBE0 894 aaKnown RBP23.23■■□□□ 1.31
RARA-201ENST00000254066 CCDC148Q8NFR7 591 aa23.23■■□□□ 1.31
RARA-201ENST00000254066 NFE2L3Q9Y4A8 694 aa23.23■■□□□ 1.31
RARA-201ENST00000254066 EXOC5O00471 708 aa23.23■■□□□ 1.31
RARA-201ENST00000254066 EBAG9O00559 213 aa23.23■■□□□ 1.31
RARA-201ENST00000254066 TNNI3KQ59H18 835 aa23.23■■□□□ 1.31
RARA-201ENST00000254066 NT5DC1Q5TFE4 455 aa23.23■■□□□ 1.31
RARA-201ENST00000254066 FPGT-TNNI3KV9GXZ4 949 aa23.23■■□□□ 1.31
RARA-201ENST00000254066 ATXN2Q99700 1313 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms