RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 POLR3EQ9NVU0 708 aa25.22■■□□□ 1.63
CLN6-201ENST00000249806 TFCP2L1Q9NZI6 479 aa25.22■■□□□ 1.63
CLN6-201ENST00000249806 CACNA1SQ13698 1873 aa25.22■■□□□ 1.63
CLN6-201ENST00000249806 FAM160A1Q05DH4 1040 aa25.22■■□□□ 1.63
CLN6-201ENST00000249806 SF3A1Q15459 793 aaKnown RBP25.22■■□□□ 1.63
CLN6-201ENST00000249806 KRT40Q6A162 431 aa25.22■■□□□ 1.63
CLN6-201ENST00000249806 ADALQ6DHV7 355 aa25.22■■□□□ 1.63
CLN6-201ENST00000249806 SYNE3Q6ZMZ3 975 aa25.22■■□□□ 1.63
CLN6-201ENST00000249806 A0A1B0GVL5 298 aa25.21■■□□□ 1.63
CLN6-201ENST00000249806 EP400Q96L91 3159 aa25.2■■□□□ 1.63
CLN6-201ENST00000249806 SPTLC2O15270 562 aa25.2■■□□□ 1.62
CLN6-201ENST00000249806 KINO60870 393 aaKnown RBP25.2■■□□□ 1.62
CLN6-201ENST00000249806 TM4SF1P30408 202 aa25.2■■□□□ 1.62
CLN6-201ENST00000249806 ZNF165P49910 485 aa25.2■■□□□ 1.62
CLN6-201ENST00000249806 WTAPQ15007 396 aa25.2■■□□□ 1.62
CLN6-201ENST00000249806 MRPS27Q92552 414 aaKnown RBP25.2■■□□□ 1.62
CLN6-201ENST00000249806 SLC26A6Q9BXS9 759 aa25.2■■□□□ 1.62
CLN6-201ENST00000249806 YEATS4O95619 227 aa25.19■■□□□ 1.62
CLN6-201ENST00000249806 NHSQ6T4R5 1651 aa25.19■■□□□ 1.62
CLN6-201ENST00000249806 THSD7AQ9UPZ6 1657 aa25.19■■□□□ 1.62
CLN6-201ENST00000249806 CYP2D7A0A087X1C5 515 aa25.18■■□□□ 1.62
CLN6-201ENST00000249806 SART3Q15020 963 aaKnown RBP25.18■■□□□ 1.62
CLN6-201ENST00000249806 ANO1Q5XXA6 986 aa25.18■■□□□ 1.62
CLN6-201ENST00000249806 FMR1NBQ8N0W7 255 aaPredicted RBP25.18■■□□□ 1.62
CLN6-201ENST00000249806 KCNG4Q8TDN1 519 aa25.18■■□□□ 1.62
CLN6-201ENST00000249806 ERCC4Q92889 916 aaPredicted RBP25.18■■□□□ 1.62
CLN6-201ENST00000249806 RNF41Q9H4P4 317 aaPredicted RBP25.18■■□□□ 1.62
CLN6-201ENST00000249806 TTC12Q9H892 705 aaPredicted RBP25.18■■□□□ 1.62
CLN6-201ENST00000249806 BAZ2AQ9UIF9 1905 aaKnown RBP25.18■■□□□ 1.62
CLN6-201ENST00000249806 CTAGE5O15320 804 aa25.18■■□□□ 1.62
CLN6-201ENST00000249806 NDUFA8P51970 172 aa25.18■■□□□ 1.62
CLN6-201ENST00000249806 TXNRD3Q86VQ6 643 aa25.18■■□□□ 1.62
CLN6-201ENST00000249806 CCDC82Q8N4S0 544 aa25.18■■□□□ 1.62
CLN6-201ENST00000249806 ANO8Q9HCE9 1232 aaPredicted RBP25.18■■□□□ 1.62
CLN6-201ENST00000249806 COL24A1Q17RW2 1714 aa25.18■■□□□ 1.62
CLN6-201ENST00000249806 A0A087WWV3 80 aa25.17■■□□□ 1.62
CLN6-201ENST00000249806 ERICH2A1L162 156 aa25.17■■□□□ 1.62
CLN6-201ENST00000249806 NPHP1O15259 732 aa25.17■■□□□ 1.62
CLN6-201ENST00000249806 HIBADHP31937 336 aaKnown RBP25.17■■□□□ 1.62
CLN6-201ENST00000249806 SSRP1Q08945 709 aaKnown RBP25.17■■□□□ 1.62
CLN6-201ENST00000249806 SLC51AQ86UW1 340 aa25.17■■□□□ 1.62
CLN6-201ENST00000249806 CMTR1Q8N1G2 835 aaKnown RBP25.17■■□□□ 1.62
CLN6-201ENST00000249806 GJD4Q96KN9 370 aaPredicted RBP25.17■■□□□ 1.62
CLN6-201ENST00000249806 ECM29Q5VYK3 1845 aa25.17■■□□□ 1.62
CLN6-201ENST00000249806 A0A1W2PQ27 194 aa25.17■■□□□ 1.62
CLN6-201ENST00000249806 A0A1W2PQ64 194 aa25.17■■□□□ 1.62
CLN6-201ENST00000249806 A0A1W2PQD8 194 aa25.17■■□□□ 1.62
CLN6-201ENST00000249806 OFD1O75665 1012 aa25.17■■□□□ 1.62
CLN6-201ENST00000249806 GUCY1A2P33402 732 aa25.17■■□□□ 1.62
CLN6-201ENST00000249806 RFC4P35249 363 aa25.17■■□□□ 1.62
CLN6-201ENST00000249806 SPC24Q8NBT2 197 aa25.16■■□□□ 1.62
CLN6-201ENST00000249806 NSUN4Q96CB9 384 aaKnown RBP25.16■■□□□ 1.62
CLN6-201ENST00000249806 ANAPC4Q9UJX5 808 aa25.16■■□□□ 1.62
CLN6-201ENST00000249806 JAG2Q9Y219 1238 aa25.16■■□□□ 1.62
CLN6-201ENST00000249806 TAF1LQ8IZX4 1826 aa25.16■■□□□ 1.62
CLN6-201ENST00000249806 SPATA31A6Q5VVP1 1343 aa25.16■■□□□ 1.62
CLN6-201ENST00000249806 IFNAR1P17181 557 aa25.16■■□□□ 1.62
CLN6-201ENST00000249806 MECOMQ03112 1051 aa25.16■■□□□ 1.62
CLN6-201ENST00000249806 TRAPPC3LQ5T215 181 aa25.16■■□□□ 1.62
CLN6-201ENST00000249806 RGS22Q8NE09 1264 aa25.16■■□□□ 1.62
CLN6-201ENST00000249806 ANKRD2Q9GZV1 360 aa25.16■■□□□ 1.62
CLN6-201ENST00000249806 FMNL1O95466 1100 aaPredicted RBP25.15■■□□□ 1.62
CLN6-201ENST00000249806 CHAF1AQ13111 956 aaPredicted RBP25.15■■□□□ 1.62
CLN6-201ENST00000249806 GNL2Q13823 731 aaKnown RBP25.15■■□□□ 1.62
CLN6-201ENST00000249806 RTN1Q16799 776 aa25.15■■□□□ 1.62
CLN6-201ENST00000249806 C11orf57Q6ZUT1 292 aaPredicted RBP25.15■■□□□ 1.62
CLN6-201ENST00000249806 UBAC1Q9BSL1 405 aa25.15■■□□□ 1.62
CLN6-201ENST00000249806 MYH2Q9UKX2 1941 aa25.15■■□□□ 1.62
CLN6-201ENST00000249806 MARCKSP29966 332 aaPredicted RBP25.14■■□□□ 1.62
CLN6-201ENST00000249806 TRIM29Q14134 588 aa25.14■■□□□ 1.62
CLN6-201ENST00000249806 FAM196AQ6ZSG2 479 aa25.14■■□□□ 1.62
CLN6-201ENST00000249806 NUP133Q8WUM0 1156 aa25.14■■□□□ 1.62
CLN6-201ENST00000249806 SEMA3EO15041 775 aa25.14■■□□□ 1.61
CLN6-201ENST00000249806 PRDX5P30044 214 aa25.14■■□□□ 1.61
CLN6-201ENST00000249806 ESR2Q92731 530 aa25.14■■□□□ 1.61
CLN6-201ENST00000249806 PRDM1O75626 825 aa25.13■■□□□ 1.61
CLN6-201ENST00000249806 WDHD1O75717 1129 aaPredicted RBP25.13■■□□□ 1.61
CLN6-201ENST00000249806 EVX2Q03828 476 aa25.13■■□□□ 1.61
CLN6-201ENST00000249806 SLC39A14Q15043 492 aa25.13■■□□□ 1.61
CLN6-201ENST00000249806 AXDND1Q5T1B0 1012 aaPredicted RBP25.13■■□□□ 1.61
CLN6-201ENST00000249806 ZNF654Q8IZM8 581 aa25.13■■□□□ 1.61
CLN6-201ENST00000249806 TMTC2Q8N394 836 aa25.13■■□□□ 1.61
CLN6-201ENST00000249806 TDRD7Q8NHU6 1098 aaKnown RBP25.13■■□□□ 1.61
CLN6-201ENST00000249806 SDF4Q9BRK5 362 aa25.13■■□□□ 1.61
CLN6-201ENST00000249806 STK36Q9NRP7 1315 aa25.13■■□□□ 1.61
CLN6-201ENST00000249806 MYH13Q9UKX3 1938 aa25.13■■□□□ 1.61
CLN6-201ENST00000249806 TNKSO95271 1327 aa25.13■■□□□ 1.61
CLN6-201ENST00000249806 U2AF2P26368 475 aaKnown RBP eCLIP25.13■■□□□ 1.61
CLN6-201ENST00000249806 MEX3CQ5U5Q3 659 aaKnown RBP25.13■■□□□ 1.61
CLN6-201ENST00000249806 FANCBQ8NB91 859 aa25.13■■□□□ 1.61
CLN6-201ENST00000249806 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.13■■□□□ 1.61
CLN6-201ENST00000249806 BRIP1Q9BX63 1249 aa25.13■■□□□ 1.61
CLN6-201ENST00000249806 AATFQ9NY61 560 aaKnown RBP eCLIP25.13■■□□□ 1.61
CLN6-201ENST00000249806 NID2Q14112 1375 aa25.12■■□□□ 1.61
CLN6-201ENST00000249806 NFIXQ14938 502 aa25.12■■□□□ 1.61
CLN6-201ENST00000249806 SEC23AQ15436 765 aa25.12■■□□□ 1.61
CLN6-201ENST00000249806 CTR9Q6PD62 1173 aa25.12■■□□□ 1.61
CLN6-201ENST00000249806 MTA3Q9BTC8 594 aa25.12■■□□□ 1.61
CLN6-201ENST00000249806 LRRC4BQ9NT99 713 aa25.12■■□□□ 1.61
CLN6-201ENST00000249806 LY75O60449 1722 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms