RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 SPA17Q15506 151 aa17.93■□□□□ 0.46
SIN3B-201ENST00000248054 SLC4A8Q2Y0W8 1093 aa17.93■□□□□ 0.46
SIN3B-201ENST00000248054 CLEC4GQ6UXB4 293 aa17.93■□□□□ 0.46
SIN3B-201ENST00000248054 GLT8D2Q9H1C3 349 aa17.93■□□□□ 0.46
SIN3B-201ENST00000248054 YEATS4O95619 227 aa17.93■□□□□ 0.46
SIN3B-201ENST00000248054 GTF2A1P52655 376 aaPredicted RBP17.93■□□□□ 0.46
SIN3B-201ENST00000248054 OVOS2A0A0G2JMS6 1433 aa17.93■□□□□ 0.46
SIN3B-201ENST00000248054 PFKFB2O60825 505 aa17.92■□□□□ 0.46
SIN3B-201ENST00000248054 RFX7Q2KHR2 1363 aa17.92■□□□□ 0.46
SIN3B-201ENST00000248054 MARCKSP29966 332 aaPredicted RBP17.92■□□□□ 0.46
SIN3B-201ENST00000248054 EDC3Q96F86 508 aaKnown RBP17.92■□□□□ 0.46
SIN3B-201ENST00000248054 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.92■□□□□ 0.46
SIN3B-201ENST00000248054 NDUFB9Q9Y6M9 179 aa17.92■□□□□ 0.46
SIN3B-201ENST00000248054 V9GYY5 206 aaPredicted RBP17.92■□□□□ 0.46
SIN3B-201ENST00000248054 CHRNDQ07001 517 aa17.92■□□□□ 0.46
SIN3B-201ENST00000248054 CCDC102AQ96A19 550 aa17.92■□□□□ 0.46
SIN3B-201ENST00000248054 PALD1Q9ULE6 856 aa17.92■□□□□ 0.46
SIN3B-201ENST00000248054 PDE6BP35913 854 aa17.92■□□□□ 0.46
SIN3B-201ENST00000248054 FAM107BQ9H098 131 aa17.92■□□□□ 0.46
SIN3B-201ENST00000248054 EXOC1Q9NV70 894 aa17.92■□□□□ 0.46
SIN3B-201ENST00000248054 RIMBP2O15034 1052 aa17.91■□□□□ 0.46
SIN3B-201ENST00000248054 BMS1Q14692 1282 aaKnown RBP17.91■□□□□ 0.46
SIN3B-201ENST00000248054 ANO1Q5XXA6 986 aa17.91■□□□□ 0.46
SIN3B-201ENST00000248054 ADCY9O60503 1353 aa17.91■□□□□ 0.46
SIN3B-201ENST00000248054 ME3Q16798 604 aa17.91■□□□□ 0.46
SIN3B-201ENST00000248054 JAKMIP3Q5VZ66 844 aa17.91■□□□□ 0.46
SIN3B-201ENST00000248054 DPP8Q6V1X1 898 aaPredicted RBP17.91■□□□□ 0.46
SIN3B-201ENST00000248054 PI4K2BQ8TCG2 481 aa17.91■□□□□ 0.46
SIN3B-201ENST00000248054 SH2D4AQ9H788 454 aa17.91■□□□□ 0.46
SIN3B-201ENST00000248054 CDHR2Q9BYE9 1310 aa17.91■□□□□ 0.46
SIN3B-201ENST00000248054 H0YIN7 160 aa17.91■□□□□ 0.46
SIN3B-201ENST00000248054 IGKV5-2P06315 115 aa17.91■□□□□ 0.46
SIN3B-201ENST00000248054 CEP135Q66GS9 1140 aa17.91■□□□□ 0.46
SIN3B-201ENST00000248054 FAM196AQ6ZSG2 479 aa17.91■□□□□ 0.46
SIN3B-201ENST00000248054 TMC6Q7Z403 805 aa17.91■□□□□ 0.46
SIN3B-201ENST00000248054 JDP2Q8WYK2 163 aa17.9■□□□□ 0.46
SIN3B-201ENST00000248054 SKIDA1Q1XH10 827 aa17.9■□□□□ 0.46
SIN3B-201ENST00000248054 TMED8Q6PL24 325 aaPredicted RBP17.9■□□□□ 0.46
SIN3B-201ENST00000248054 SASH1O94885 1247 aa17.9■□□□□ 0.46
SIN3B-201ENST00000248054 PPARAQ07869 468 aa17.9■□□□□ 0.46
SIN3B-201ENST00000248054 ZRSR2Q15696 482 aaKnown RBP17.9■□□□□ 0.46
SIN3B-201ENST00000248054 VPS36Q86VN1 386 aa17.9■□□□□ 0.46
SIN3B-201ENST00000248054 IFNL3Q8IZI9 196 aa17.9■□□□□ 0.46
SIN3B-201ENST00000248054 LEMD3Q9Y2U8 911 aa17.9■□□□□ 0.46
SIN3B-201ENST00000248054 SETD1BQ9UPS6 1966 aaKnown RBP17.9■□□□□ 0.46
SIN3B-201ENST00000248054 ARHGAP23Q9P227 1491 aa17.89■□□□□ 0.46
SIN3B-201ENST00000248054 URI1O94763 535 aaPredicted RBP17.89■□□□□ 0.45
SIN3B-201ENST00000248054 IQUBQ8NA54 791 aa17.89■□□□□ 0.45
SIN3B-201ENST00000248054 TRMT1Q9NXH9 659 aaKnown RBP17.89■□□□□ 0.45
SIN3B-201ENST00000248054 TMEM63CQ9P1W3 806 aa17.89■□□□□ 0.45
SIN3B-201ENST00000248054 PALLDQ8WX93 1383 aa17.89■□□□□ 0.45
SIN3B-201ENST00000248054 MTIF2P46199 727 aaKnown RBP17.89■□□□□ 0.45
SIN3B-201ENST00000248054 CD163L1Q9NR16 1453 aa17.89■□□□□ 0.45
SIN3B-201ENST00000248054 COL3A1P02461 1466 aaPredicted RBP17.89■□□□□ 0.45
SIN3B-201ENST00000248054 TNNI2P48788 182 aa17.89■□□□□ 0.45
SIN3B-201ENST00000248054 PPP4R3AQ6IN85 833 aa17.89■□□□□ 0.45
SIN3B-201ENST00000248054 PUS3Q9BZE2 481 aaKnown RBP17.89■□□□□ 0.45
SIN3B-201ENST00000248054 AATFQ9NY61 560 aaKnown RBP eCLIP17.89■□□□□ 0.45
SIN3B-201ENST00000248054 CUTAO60888 179 aa17.89■□□□□ 0.45
SIN3B-201ENST00000248054 NT5C2P49902 561 aa17.89■□□□□ 0.45
SIN3B-201ENST00000248054 USPL1Q5W0Q7 1092 aa17.89■□□□□ 0.45
SIN3B-201ENST00000248054 ZKSCAN3Q9BRR0 538 aa17.89■□□□□ 0.45
SIN3B-201ENST00000248054 TLR7Q9NYK1 1049 aaKnown RBP17.89■□□□□ 0.45
SIN3B-201ENST00000248054 MED23Q9ULK4 1368 aa17.88■□□□□ 0.45
SIN3B-201ENST00000248054 PPP1R2P41236 205 aa17.88■□□□□ 0.45
SIN3B-201ENST00000248054 KIF4BQ2VIQ3 1234 aa17.88■□□□□ 0.45
SIN3B-201ENST00000248054 CACNA2D4Q7Z3S7 1137 aa17.88■□□□□ 0.45
SIN3B-201ENST00000248054 LEO1Q8WVC0 666 aaPredicted RBP17.88■□□□□ 0.45
SIN3B-201ENST00000248054 ZFP91Q96JP5 570 aaPredicted RBP17.88■□□□□ 0.45
SIN3B-201ENST00000248054 DNAJC25Q9H1X3 360 aa17.88■□□□□ 0.45
SIN3B-201ENST00000248054 CLSTN2Q9H4D0 955 aa17.88■□□□□ 0.45
SIN3B-201ENST00000248054 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.88■□□□□ 0.453e-8■■■□□ 19.1
SIN3B-201ENST00000248054 USO1O60763 962 aaKnown RBP17.88■□□□□ 0.45
SIN3B-201ENST00000248054 IDEP14735 1019 aa17.88■□□□□ 0.45
SIN3B-201ENST00000248054 CUL4AQ13619 759 aa17.88■□□□□ 0.45
SIN3B-201ENST00000248054 NLGN1Q8N2Q7 840 aa17.88■□□□□ 0.45
SIN3B-201ENST00000248054 CEMIPQ8WUJ3 1361 aa17.88■□□□□ 0.45
SIN3B-201ENST00000248054 PSMA7O14818 248 aa17.88■□□□□ 0.45
SIN3B-201ENST00000248054 RXRAP19793 462 aa17.88■□□□□ 0.45
SIN3B-201ENST00000248054 NUP88Q99567 741 aaPredicted RBP17.88■□□□□ 0.45
SIN3B-201ENST00000248054 NCOA5Q9HCD5 579 aaKnown RBP17.88■□□□□ 0.45
SIN3B-201ENST00000248054 UBASH3AP57075 661 aa17.88■□□□□ 0.45
SIN3B-201ENST00000248054 DTHD1Q6ZMT9 781 aa17.88■□□□□ 0.45
SIN3B-201ENST00000248054 SHTN1A0MZ66 631 aa17.87■□□□□ 0.45
SIN3B-201ENST00000248054 TRIM28Q13263 835 aaKnown RBP17.87■□□□□ 0.45
SIN3B-201ENST00000248054 RRAGBQ5VZM2 374 aa17.87■□□□□ 0.45
SIN3B-201ENST00000248054 MPHOSPH6Q99547 160 aaKnown RBP17.87■□□□□ 0.45
SIN3B-201ENST00000248054 CTDSPL2Q05D32 466 aa17.87■□□□□ 0.45
SIN3B-201ENST00000248054 CCDC186Q7Z3E2 898 aa17.87■□□□□ 0.45
SIN3B-201ENST00000248054 FGAP02671 866 aa17.87■□□□□ 0.45
SIN3B-201ENST00000248054 SNW1Q13573 536 aaKnown RBP17.87■□□□□ 0.45
SIN3B-201ENST00000248054 KRT79Q5XKE5 535 aa17.87■□□□□ 0.45
SIN3B-201ENST00000248054 MRPL12P52815 198 aaKnown RBP17.86■□□□□ 0.45
SIN3B-201ENST00000248054 SMARCC2Q8TAQ2 1214 aa17.86■□□□□ 0.45
SIN3B-201ENST00000248054 WDHD1O75717 1129 aaPredicted RBP17.86■□□□□ 0.45
SIN3B-201ENST00000248054 DIS3L2Q8IYB7 885 aaKnown RBP17.86■□□□□ 0.45
SIN3B-201ENST00000248054 TRIM47Q96LD4 638 aa17.86■□□□□ 0.45
SIN3B-201ENST00000248054 ZMYM6O95789 1325 aa17.86■□□□□ 0.45
SIN3B-201ENST00000248054 PHKA1P46020 1223 aa17.86■□□□□ 0.45
SIN3B-201ENST00000248054 XDHP47989 1333 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms