RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 SYNE3Q6ZMZ3 975 aa25.43■■□□□ 1.66
RNF39-201ENST00000244360 MINPP1Q9UNW1 487 aa25.43■■□□□ 1.66
RNF39-201ENST00000244360 SLC12A7Q9Y666 1083 aa25.43■■□□□ 1.66
RNF39-201ENST00000244360 CACNA1SQ13698 1873 aa25.42■■□□□ 1.66
RNF39-201ENST00000244360 CDC25BP30305 580 aa25.42■■□□□ 1.66
RNF39-201ENST00000244360 IARSP41252 1262 aaKnown RBP25.42■■□□□ 1.66
RNF39-201ENST00000244360 GYG1P46976 350 aa25.42■■□□□ 1.66
RNF39-201ENST00000244360 ADGRA1Q86SQ6 560 aa25.42■■□□□ 1.66
RNF39-201ENST00000244360 MIGA1Q8NAN2 632 aa25.42■■□□□ 1.66
RNF39-201ENST00000244360 SF3A1Q15459 793 aaKnown RBP25.41■■□□□ 1.66
RNF39-201ENST00000244360 TBC1D9BQ66K14 1250 aa25.41■■□□□ 1.66
RNF39-201ENST00000244360 PHKBQ93100 1093 aa25.41■■□□□ 1.66
RNF39-201ENST00000244360 TRIM5Q9C035 493 aa25.41■■□□□ 1.66
RNF39-201ENST00000244360 RNF41Q9H4P4 317 aaPredicted RBP25.41■■□□□ 1.66
RNF39-201ENST00000244360 ANAPC4Q9UJX5 808 aa25.41■■□□□ 1.66
RNF39-201ENST00000244360 CCDC69A6NI79 296 aa25.41■■□□□ 1.66
RNF39-201ENST00000244360 PTGS1P23219 599 aa25.41■■□□□ 1.66
RNF39-201ENST00000244360 VPS37DQ86XT2 251 aa25.41■■□□□ 1.66
RNF39-201ENST00000244360 NARFQ9UHQ1 456 aa25.41■■□□□ 1.66
RNF39-201ENST00000244360 RCAN1P53805 252 aa25.4■■□□□ 1.66
RNF39-201ENST00000244360 AXDND1Q5T1B0 1012 aaPredicted RBP25.4■■□□□ 1.66
RNF39-201ENST00000244360 C11orf57Q6ZUT1 292 aaPredicted RBP25.4■■□□□ 1.66
RNF39-201ENST00000244360 MYL10Q9BUA6 226 aa25.4■■□□□ 1.66
RNF39-201ENST00000244360 FMNL1O95466 1100 aaPredicted RBP25.4■■□□□ 1.66
RNF39-201ENST00000244360 IFNAR1P17181 557 aa25.4■■□□□ 1.66
RNF39-201ENST00000244360 NDUFA8P51970 172 aa25.4■■□□□ 1.66
RNF39-201ENST00000244360 SLC39A14Q15043 492 aa25.4■■□□□ 1.66
RNF39-201ENST00000244360 IQSEC3Q9UPP2 1182 aaPredicted RBP25.4■■□□□ 1.66
RNF39-201ENST00000244360 TAF1P21675 1872 aa25.39■■□□□ 1.66
RNF39-201ENST00000244360 RPS6KA4O75676 772 aa25.39■■□□□ 1.66
RNF39-201ENST00000244360 U2AF2P26368 475 aaKnown RBP eCLIP25.39■■□□□ 1.66
RNF39-201ENST00000244360 PPARAQ07869 468 aa25.39■■□□□ 1.66
RNF39-201ENST00000244360 SART3Q15020 963 aaKnown RBP25.39■■□□□ 1.66
RNF39-201ENST00000244360 DRC7Q8IY82 874 aa25.39■■□□□ 1.66
RNF39-201ENST00000244360 CCDC144CPQ8IYA2 1237 aa25.39■■□□□ 1.66
RNF39-201ENST00000244360 RIOK1Q9BRS2 568 aaKnown RBP25.39■■□□□ 1.66
RNF39-201ENST00000244360 NYXQ9GZU5 481 aa25.39■■□□□ 1.66
RNF39-201ENST00000244360 ANO10Q9NW15 660 aa25.39■■□□□ 1.66
RNF39-201ENST00000244360 MAGEB6P1A0A0J9YX57 407 aa25.39■■□□□ 1.65
RNF39-201ENST00000244360 A0A1B0GVL5 298 aa25.39■■□□□ 1.65
RNF39-201ENST00000244360 KCNQ4P56696 695 aa25.39■■□□□ 1.65
RNF39-201ENST00000244360 CAVIN4Q5BKX8 364 aa25.39■■□□□ 1.65
RNF39-201ENST00000244360 SARM1Q6SZW1 724 aa25.39■■□□□ 1.65
RNF39-201ENST00000244360 CELF1Q92879 486 aaKnown RBP25.39■■□□□ 1.65
RNF39-201ENST00000244360 WTIPA6NIX2 430 aaPredicted RBP25.38■■□□□ 1.65
RNF39-201ENST00000244360 CCDC186Q7Z3E2 898 aa25.38■■□□□ 1.65
RNF39-201ENST00000244360 FAM84BQ96KN1 310 aaPredicted RBP25.38■■□□□ 1.65
RNF39-201ENST00000244360 RAI14Q9P0K7 980 aa25.38■■□□□ 1.65
RNF39-201ENST00000244360 PDS5AQ29RF7 1337 aaKnown RBP25.38■■□□□ 1.65
RNF39-201ENST00000244360 SEMA3EO15041 775 aa25.37■■□□□ 1.65
RNF39-201ENST00000244360 CMA1P23946 247 aa25.37■■□□□ 1.65
RNF39-201ENST00000244360 WTAPQ15007 396 aa25.37■■□□□ 1.65
RNF39-201ENST00000244360 PTF1AQ7RTS3 328 aa25.37■■□□□ 1.65
RNF39-201ENST00000244360 TMTC2Q8N394 836 aa25.37■■□□□ 1.65
RNF39-201ENST00000244360 ABCF2Q9UG63 623 aa25.37■■□□□ 1.65
RNF39-201ENST00000244360 BTAF1O14981 1849 aa25.37■■□□□ 1.65
RNF39-201ENST00000244360 NHSQ6T4R5 1651 aa25.37■■□□□ 1.65
RNF39-201ENST00000244360 GOLGA6L19H0YKK7 550 aa25.37■■□□□ 1.65
RNF39-201ENST00000244360 SSRP1Q08945 709 aaKnown RBP25.37■■□□□ 1.65
RNF39-201ENST00000244360 FBXO33Q7Z6M2 555 aa25.37■■□□□ 1.65
RNF39-201ENST00000244360 WASF1Q92558 559 aa25.37■■□□□ 1.65
RNF39-201ENST00000244360 NGLY1Q96IV0 654 aa25.37■■□□□ 1.65
RNF39-201ENST00000244360 THSD7AQ9UPZ6 1657 aa25.36■■□□□ 1.65
RNF39-201ENST00000244360 BICDL1Q6ZP65 573 aa25.36■■□□□ 1.65
RNF39-201ENST00000244360 FNBP4Q8N3X1 1017 aaPredicted RBP25.36■■□□□ 1.65
RNF39-201ENST00000244360 C8orf37Q96NL8 207 aa25.36■■□□□ 1.65
RNF39-201ENST00000244360 PPP6R2O75170 966 aa25.36■■□□□ 1.65
RNF39-201ENST00000244360 TRIM29Q14134 588 aa25.36■■□□□ 1.65
RNF39-201ENST00000244360 RRP12Q5JTH9 1297 aaKnown RBP25.36■■□□□ 1.65
RNF39-201ENST00000244360 SLC26A6Q9BXS9 759 aa25.36■■□□□ 1.65
RNF39-201ENST00000244360 GTF2E1P29083 439 aaPredicted RBP25.35■■□□□ 1.65
RNF39-201ENST00000244360 PTPAQ15257 358 aa25.35■■□□□ 1.65
RNF39-201ENST00000244360 RTN1Q16799 776 aa25.35■■□□□ 1.65
RNF39-201ENST00000244360 MAP3K14Q99558 947 aa25.35■■□□□ 1.65
RNF39-201ENST00000244360 SDR42E1Q8WUS8 393 aa25.35■■□□□ 1.65
RNF39-201ENST00000244360 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.35■■□□□ 1.65
RNF39-201ENST00000244360 BRIP1Q9BX63 1249 aa25.35■■□□□ 1.65
RNF39-201ENST00000244360 ERICH2A1L162 156 aa25.34■■□□□ 1.65
RNF39-201ENST00000244360 WDHD1O75717 1129 aaPredicted RBP25.34■■□□□ 1.65
RNF39-201ENST00000244360 RPS8P62241 208 aaKnown RBP25.34■■□□□ 1.65
RNF39-201ENST00000244360 ZNF384Q8TF68 577 aa25.34■■□□□ 1.65
RNF39-201ENST00000244360 SETDB2Q96T68 719 aa25.34■■□□□ 1.65
RNF39-201ENST00000244360 SDF4Q9BRK5 362 aa25.34■■□□□ 1.65
RNF39-201ENST00000244360 CCDC94Q9BW85 323 aaPredicted RBP25.34■■□□□ 1.65
RNF39-201ENST00000244360 TOMM22Q9NS69 142 aa25.34■■□□□ 1.65
RNF39-201ENST00000244360 CLIP2Q9UDT6 1046 aa25.34■■□□□ 1.65
RNF39-201ENST00000244360 SRP68Q9UHB9 627 aaKnown RBP25.34■■□□□ 1.65
RNF39-201ENST00000244360 MROH7-TTC4A0A0A0MT08 1334 aa25.34■■□□□ 1.65
RNF39-201ENST00000244360 FAM237AA0A1B0GTK4 181 aa25.33■■□□□ 1.65
RNF39-201ENST00000244360 ZBTB22O15209 634 aa25.33■■□□□ 1.65
RNF39-201ENST00000244360 SMIM5Q71RC9 77 aa25.33■■□□□ 1.65
RNF39-201ENST00000244360 NBPF11Q86T75 865 aa25.33■■□□□ 1.65
RNF39-201ENST00000244360 DHX40Q8IX18 779 aaKnown RBP25.33■■□□□ 1.65
RNF39-201ENST00000244360 CEP57L1Q8IYX8 460 aa25.33■■□□□ 1.65
RNF39-201ENST00000244360 MRFAP1L1Q96HT8 127 aa25.33■■□□□ 1.65
RNF39-201ENST00000244360 KIAA1468Q9P260 1216 aa25.33■■□□□ 1.65
RNF39-201ENST00000244360 NEMFO60524 1076 aa25.33■■□□□ 1.65
RNF39-201ENST00000244360 PFKFB1P16118 471 aa25.33■■□□□ 1.65
RNF39-201ENST00000244360 SEC23AQ15436 765 aa25.33■■□□□ 1.65
RNF39-201ENST00000244360 JMYQ8N9B5 988 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms