RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 ADAMTS13Q76LX8 1427 aa12.47□□□□□ -0.41
COPA-201ENST00000241704 LOC102724428A0A0B4J2F2 783 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 GPAA1O43292 621 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 CALM1P0DP23 149 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 CALM2P0DP24 149 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 CALM3P0DP25 149 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 SIK1P57059 783 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 GNG11P61952 73 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 CFAP100Q494V2 611 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 NLGN1Q8N2Q7 840 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 GOLGA1Q92805 767 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 PTPDC1A2A3K4 754 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 TAF5LO75529 589 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 CLCN6P51797 869 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 GIGYF2Q6Y7W6 1299 aaKnown RBP12.46□□□□□ -0.41
COPA-201ENST00000241704 TTC6Q86TZ1 520 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 NCAPGQ9BPX3 1015 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 DIP2BQ9P265 1576 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 PPP1R12BO60237 982 aaPredicted RBP12.46□□□□□ -0.41
COPA-201ENST00000241704 PLS1Q14651 629 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 SIRT2Q8IXJ6 389 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 NIM1KQ8IY84 436 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 CACTINQ8WUQ7 758 aaKnown RBP12.46□□□□□ -0.41
COPA-201ENST00000241704 NDUFB9Q9Y6M9 179 aa12.46□□□□□ -0.41
COPA-201ENST00000241704 IL6STP40189 918 aaPredicted RBP12.46□□□□□ -0.42
COPA-201ENST00000241704 VTI1AQ96AJ9 217 aa12.46□□□□□ -0.42
COPA-201ENST00000241704 TM6SF1Q9BZW5 370 aa12.46□□□□□ -0.42
COPA-201ENST00000241704 UBA5Q9GZZ9 404 aa12.46□□□□□ -0.42
COPA-201ENST00000241704 CYP27B1O15528 508 aa12.45□□□□□ -0.42
COPA-201ENST00000241704 TRIM21P19474 475 aaKnown RBP12.45□□□□□ -0.42
COPA-201ENST00000241704 ZAP70P43403 619 aa12.45□□□□□ -0.42
COPA-201ENST00000241704 CCDC102BQ68D86 513 aa12.45□□□□□ -0.42
COPA-201ENST00000241704 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.45□□□□□ -0.42
COPA-201ENST00000241704 SSH2Q76I76 1423 aa12.45□□□□□ -0.42
COPA-201ENST00000241704 BMP15O95972 392 aa12.45□□□□□ -0.42
COPA-201ENST00000241704 SEPT12Q8IYM1 358 aa12.45□□□□□ -0.42
COPA-201ENST00000241704 HEG1Q9ULI3 1381 aa12.45□□□□□ -0.42
COPA-201ENST00000241704 VWDEQ8N2E2 1590 aa12.45□□□□□ -0.42
COPA-201ENST00000241704 ACTN2P35609 894 aa12.45□□□□□ -0.42
COPA-201ENST00000241704 UNC5CLQ8IV45 518 aa12.45□□□□□ -0.42
COPA-201ENST00000241704 TEX11Q8IYF3 940 aa12.45□□□□□ -0.42
COPA-201ENST00000241704 CARD6Q9BX69 1037 aa12.45□□□□□ -0.42
COPA-201ENST00000241704 RTL9Q8NET4 1388 aa12.45□□□□□ -0.42
COPA-201ENST00000241704 PYM1Q9BRP8 204 aaKnown RBP12.45□□□□□ -0.42
COPA-201ENST00000241704 BEGAINQ9BUH8 593 aa12.45□□□□□ -0.42
COPA-201ENST00000241704 CLSTN2Q9H4D0 955 aa12.45□□□□□ -0.42
COPA-201ENST00000241704 PPIP5K2O43314 1243 aa12.44□□□□□ -0.42
COPA-201ENST00000241704 FBXO18Q8NFZ0 1043 aa12.44□□□□□ -0.42
COPA-201ENST00000241704 ST7Q9NRC1 585 aa12.44□□□□□ -0.42
COPA-201ENST00000241704 KANK3Q6NY19 840 aa12.44□□□□□ -0.42
COPA-201ENST00000241704 GBP6Q6ZN66 633 aa12.44□□□□□ -0.42
COPA-201ENST00000241704 HDXQ7Z353 690 aa12.44□□□□□ -0.42
COPA-201ENST00000241704 SPATA5Q8NB90 893 aa12.44□□□□□ -0.42
COPA-201ENST00000241704 EXOC4Q96A65 974 aa12.44□□□□□ -0.42
COPA-201ENST00000241704 EDC3Q96F86 508 aaKnown RBP12.44□□□□□ -0.42
COPA-201ENST00000241704 TMEM87BQ96K49 555 aa12.44□□□□□ -0.42
COPA-201ENST00000241704 TCP11L1Q9NUJ3 509 aa12.44□□□□□ -0.42
COPA-201ENST00000241704 TOP1P11387 765 aaKnown RBP12.44□□□□□ -0.42
COPA-201ENST00000241704 CDC25BP30305 580 aa12.44□□□□□ -0.42
COPA-201ENST00000241704 B4DLN1 442 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 MRPL12P52815 198 aaKnown RBP12.43□□□□□ -0.42
COPA-201ENST00000241704 RPS8P62241 208 aaKnown RBP12.43□□□□□ -0.42
COPA-201ENST00000241704 DPY19L2Q6NUT2 758 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 CCDC148Q8NFR7 591 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 CRACR2AQ9BSW2 395 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 DSCC1Q9BVC3 393 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 LUC7LQ9NQ29 371 aaKnown RBP12.43□□□□□ -0.42
COPA-201ENST00000241704 ZBTB1Q9Y2K1 713 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 MRVI1Q9Y6F6 885 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 ADGRB1O14514 1584 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 LRRC7Q96NW7 1537 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 LIG1P18858 919 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 MAP9Q49MG5 647 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 DNAJC21Q5F1R6 531 aaKnown RBP12.43□□□□□ -0.42
COPA-201ENST00000241704 AOPEPQ8N6M6 819 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 TDRD7Q8NHU6 1098 aaKnown RBP12.43□□□□□ -0.42
COPA-201ENST00000241704 MAGEA9P43362 315 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 MUM1L1Q5H9M0 696 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 KLHL10Q6JEL2 608 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 MRPS27Q92552 414 aaKnown RBP12.43□□□□□ -0.42
COPA-201ENST00000241704 MRFAP1L1Q96HT8 127 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 CENPHQ9H3R5 247 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 ARMT1Q9H993 441 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 MAST3O60307 1309 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 UBA7P41226 1012 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 SYKP43405 635 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 LRRC24Q50LG9 513 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 HAUS7Q99871 368 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 GPR108Q9NPR9 543 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 IMPACTQ9P2X3 320 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 BIN2Q9UBW5 565 aaPredicted RBP12.43□□□□□ -0.42
COPA-201ENST00000241704 RGS12O14924 1447 aa12.43□□□□□ -0.42
COPA-201ENST00000241704 NEURL4Q96JN8 1562 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 ARHGAP27Q6ZUM4 889 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 WDR66Q8TBY9 1149 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 LLPHQ9BRT6 129 aaKnown RBP12.42□□□□□ -0.42
COPA-201ENST00000241704 ZSWIM4Q9H7M6 989 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 TNS3Q68CZ2 1445 aa12.42□□□□□ -0.42
COPA-201ENST00000241704 CRKLP46109 303 aaKnown RBP12.42□□□□□ -0.42
COPA-201ENST00000241704 GPR161Q8N6U8 529 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms