RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 MYH16Q9H6N6 1097 aa12.28□□□□□ -0.44
NDUFB3-201ENST00000237889 NEURL1BA8MQ27 555 aa12.27□□□□□ -0.45
NDUFB3-201ENST00000237889 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
NDUFB3-201ENST00000237889 PABPC4Q13310 644 aaKnown RBP eCLIP12.27□□□□□ -0.455e-11■□□□□ 10.7
NDUFB3-201ENST00000237889 LDHAL6AQ6ZMR3 332 aa12.27□□□□□ -0.45
NDUFB3-201ENST00000237889 ASB2Q96Q27 587 aa12.27□□□□□ -0.45
NDUFB3-201ENST00000237889 UHRF1Q96T88 793 aaPredicted RBP12.27□□□□□ -0.45
NDUFB3-201ENST00000237889 CNNM1Q9NRU3 951 aa12.27□□□□□ -0.45
NDUFB3-201ENST00000237889 CHMP3Q9Y3E7 222 aa12.27□□□□□ -0.45
NDUFB3-201ENST00000237889 RPAP1Q9BWH6 1393 aaPredicted RBP12.27□□□□□ -0.45
NDUFB3-201ENST00000237889 ELL2O00472 640 aaPredicted RBP12.26□□□□□ -0.45
NDUFB3-201ENST00000237889 MRPS5P82675 430 aaKnown RBP12.26□□□□□ -0.45
NDUFB3-201ENST00000237889 UBE4AQ14139 1066 aa12.26□□□□□ -0.45
NDUFB3-201ENST00000237889 SHHQ15465 462 aa12.26□□□□□ -0.45
NDUFB3-201ENST00000237889 CCDC57Q2TAC2 916 aa12.26□□□□□ -0.45
NDUFB3-201ENST00000237889 CWF19L2Q2TBE0 894 aaKnown RBP12.26□□□□□ -0.45
NDUFB3-201ENST00000237889 ADAMTS19Q8TE59 1207 aa12.26□□□□□ -0.45
NDUFB3-201ENST00000237889 SENP6Q9GZR1 1112 aaPredicted RBP12.26□□□□□ -0.45
NDUFB3-201ENST00000237889 SUGT1Q9Y2Z0 365 aa12.26□□□□□ -0.45
NDUFB3-201ENST00000237889 COL2A1P02458 1487 aaPredicted RBP12.26□□□□□ -0.45
NDUFB3-201ENST00000237889 ZSWIM8A7E2V4 1837 aa12.25□□□□□ -0.45
NDUFB3-201ENST00000237889 PRUNE2Q8WUY3 3088 aa12.25□□□□□ -0.45
NDUFB3-201ENST00000237889 PRR29P0C7W0 189 aa12.25□□□□□ -0.45
NDUFB3-201ENST00000237889 XRCC5P13010 732 aaKnown RBP12.25□□□□□ -0.45
NDUFB3-201ENST00000237889 CALD1Q05682 793 aaKnown RBP12.25□□□□□ -0.45
NDUFB3-201ENST00000237889 GCKRQ14397 625 aa12.25□□□□□ -0.45
NDUFB3-201ENST00000237889 CAVIN4Q5BKX8 364 aa12.25□□□□□ -0.45
NDUFB3-201ENST00000237889 CCAR1Q8IX12 1150 aaKnown RBP12.25□□□□□ -0.45
NDUFB3-201ENST00000237889 SCYL3Q8IZE3 742 aa12.25□□□□□ -0.45
NDUFB3-201ENST00000237889 STK31Q9BXU1 1019 aa12.25□□□□□ -0.45
NDUFB3-201ENST00000237889 TTYH1Q9H313 450 aaPredicted RBP12.25□□□□□ -0.45
NDUFB3-201ENST00000237889 THEGQ9P2T0 379 aa12.25□□□□□ -0.45
NDUFB3-201ENST00000237889 GJD2Q9UKL4 321 aa12.25□□□□□ -0.45
NDUFB3-201ENST00000237889 AGTPBP1Q9UPW5 1226 aa12.25□□□□□ -0.45
NDUFB3-201ENST00000237889 LRRFIP2Q9Y608 721 aaKnown RBP12.25□□□□□ -0.45
NDUFB3-201ENST00000237889 PTPRAP18433 802 aa12.24□□□□□ -0.45
NDUFB3-201ENST00000237889 GYG1P46976 350 aa12.24□□□□□ -0.45
NDUFB3-201ENST00000237889 CHAF1AQ13111 956 aaPredicted RBP12.24□□□□□ -0.45
NDUFB3-201ENST00000237889 PDE3AQ14432 1141 aa12.24□□□□□ -0.45
NDUFB3-201ENST00000237889 MAP3K21Q5TCX8 1036 aa12.24□□□□□ -0.45
NDUFB3-201ENST00000237889 APOBEC3HQ6NTF7 200 aaKnown RBP12.24□□□□□ -0.45
NDUFB3-201ENST00000237889 HHIPL2Q6UWX4 724 aa12.24□□□□□ -0.45
NDUFB3-201ENST00000237889 SOCS4Q8WXH5 440 aa12.24□□□□□ -0.45
NDUFB3-201ENST00000237889 FAM84BQ96KN1 310 aaPredicted RBP12.24□□□□□ -0.45
NDUFB3-201ENST00000237889 NUDT12Q9BQG2 462 aa12.24□□□□□ -0.45
NDUFB3-201ENST00000237889 TSPYL2Q9H2G4 693 aaPredicted RBP12.24□□□□□ -0.45
NDUFB3-201ENST00000237889 MBIPQ9NS73 344 aa12.24□□□□□ -0.45
NDUFB3-201ENST00000237889 AFG3L2Q9Y4W6 797 aa12.24□□□□□ -0.45
NDUFB3-201ENST00000237889 MUC3AQ02505 3323 aa12.24□□□□□ -0.45
NDUFB3-201ENST00000237889 ZKSCAN1P17029 563 aaPredicted RBP12.23□□□□□ -0.45
NDUFB3-201ENST00000237889 CYP2B6P20813 491 aa12.23□□□□□ -0.45
NDUFB3-201ENST00000237889 TCP10Q12799 353 aa12.23□□□□□ -0.45
NDUFB3-201ENST00000237889 TRIM32Q13049 653 aa12.23□□□□□ -0.45
NDUFB3-201ENST00000237889 GAS2L1Q99501 681 aaPredicted RBP12.23□□□□□ -0.45
NDUFB3-201ENST00000237889 EYSQ5T1H1 3165 aa12.23□□□□□ -0.45
NDUFB3-201ENST00000237889 LAMA2P24043 3122 aaKnown RBP12.22□□□□□ -0.45
NDUFB3-201ENST00000237889 TRIM75PA6NK02 468 aa12.22□□□□□ -0.45
NDUFB3-201ENST00000237889 MSCO60682 206 aa12.22□□□□□ -0.45
NDUFB3-201ENST00000237889 GNAI1P63096 354 aa12.22□□□□□ -0.45
NDUFB3-201ENST00000237889 TRIB2Q92519 343 aa12.22□□□□□ -0.45
NDUFB3-201ENST00000237889 TRIM35Q9UPQ4 493 aa12.22□□□□□ -0.45
NDUFB3-201ENST00000237889 OTOFQ9HC10 1997 aa12.21□□□□□ -0.45
NDUFB3-201ENST00000237889 CTNND1O60716 968 aaKnown RBP12.21□□□□□ -0.45
NDUFB3-201ENST00000237889 ZEB1P37275 1124 aaPredicted RBP12.21□□□□□ -0.45
NDUFB3-201ENST00000237889 ATN1P54259 1190 aaPredicted RBP12.21□□□□□ -0.45
NDUFB3-201ENST00000237889 LHX8Q68G74 356 aa12.21□□□□□ -0.45
NDUFB3-201ENST00000237889 PROCA1Q8NCQ7 364 aaPredicted RBP12.21□□□□□ -0.45
NDUFB3-201ENST00000237889 PPM1EQ8WY54 764 aa12.21□□□□□ -0.45
NDUFB3-201ENST00000237889 PRDM5Q9NQX1 630 aaPredicted RBP12.21□□□□□ -0.45
NDUFB3-201ENST00000237889 DLG5Q8TDM6 1919 aa12.2□□□□□ -0.46
NDUFB3-201ENST00000237889 EVX2Q03828 476 aa12.2□□□□□ -0.46
NDUFB3-201ENST00000237889 CACNB2Q08289 660 aaPredicted RBP12.2□□□□□ -0.46
NDUFB3-201ENST00000237889 GRIN2CQ14957 1233 aa12.2□□□□□ -0.46
NDUFB3-201ENST00000237889 AAK1Q2M2I8 961 aa12.2□□□□□ -0.46
NDUFB3-201ENST00000237889 C9orf50Q5SZB4 431 aa12.2□□□□□ -0.46
NDUFB3-201ENST00000237889 AKNAD1Q5T1N1 836 aa12.2□□□□□ -0.46
NDUFB3-201ENST00000237889 USP38Q8NB14 1042 aa12.2□□□□□ -0.46
NDUFB3-201ENST00000237889 RUNDC1Q96C34 613 aa12.2□□□□□ -0.46
NDUFB3-201ENST00000237889 SNX27Q96L92 541 aa12.2□□□□□ -0.46
NDUFB3-201ENST00000237889 RNPC3Q96LT9 517 aaKnown RBP12.2□□□□□ -0.46
NDUFB3-201ENST00000237889 IFT57Q9NWB7 429 aa12.2□□□□□ -0.46
NDUFB3-201ENST00000237889 ATP11BQ9Y2G3 1177 aa12.2□□□□□ -0.46
NDUFB3-201ENST00000237889 ECM29Q5VYK3 1845 aa12.2□□□□□ -0.46
NDUFB3-201ENST00000237889 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.19□□□□□ -0.46
NDUFB3-201ENST00000237889 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.19□□□□□ -0.46
NDUFB3-201ENST00000237889 RGS2P41220 211 aa12.19□□□□□ -0.46
NDUFB3-201ENST00000237889 RTP1P59025 263 aa12.19□□□□□ -0.46
NDUFB3-201ENST00000237889 MFSD14CQ5VZR4 134 aa12.19□□□□□ -0.46
NDUFB3-201ENST00000237889 FBXO33Q7Z6M2 555 aa12.19□□□□□ -0.46
NDUFB3-201ENST00000237889 ZSCAN29Q8IWY8 852 aaPredicted RBP12.19□□□□□ -0.46
NDUFB3-201ENST00000237889 LINS1Q8NG48 757 aa12.19□□□□□ -0.46
NDUFB3-201ENST00000237889 BADQ92934 168 aa12.19□□□□□ -0.46
NDUFB3-201ENST00000237889 TBC1D2Q9BYX2 928 aa12.19□□□□□ -0.46
NDUFB3-201ENST00000237889 ZNF576Q9H609 170 aa12.19□□□□□ -0.46
NDUFB3-201ENST00000237889 CWC22Q9HCG8 908 aaKnown RBP12.19□□□□□ -0.46
NDUFB3-201ENST00000237889 IQSEC3Q9UPP2 1182 aaPredicted RBP12.19□□□□□ -0.46
NDUFB3-201ENST00000237889 PHF20L1A8MW92 1017 aa12.18□□□□□ -0.46
NDUFB3-201ENST00000237889 DNM1LO00429 736 aa12.18□□□□□ -0.46
NDUFB3-201ENST00000237889 MAPK4P31152 587 aa12.18□□□□□ -0.46
NDUFB3-201ENST00000237889 CASP7P55210 303 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms