RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ECE1P42892 770 aa16.73■□□□□ 0.27
VEGFA-201ENST00000230480 TNNI2P48788 182 aa16.73■□□□□ 0.27
VEGFA-201ENST00000230480 GSTO1P78417 241 aa16.73■□□□□ 0.27
VEGFA-201ENST00000230480 ARMC9Q7Z3E5 817 aa16.73■□□□□ 0.27
VEGFA-201ENST00000230480 CCDC102AQ96A19 550 aa16.73■□□□□ 0.27
VEGFA-201ENST00000230480 DNAJC2Q99543 621 aaKnown RBP16.73■□□□□ 0.27
VEGFA-201ENST00000230480 INPP5BP32019 993 aa16.72■□□□□ 0.27
VEGFA-201ENST00000230480 NF2P35240 595 aa16.72■□□□□ 0.27
VEGFA-201ENST00000230480 EVX2Q03828 476 aa16.72■□□□□ 0.27
VEGFA-201ENST00000230480 ANKRD45Q5TZF3 282 aa16.72■□□□□ 0.27
VEGFA-201ENST00000230480 SPRYD7Q5W111 196 aa16.72■□□□□ 0.27
VEGFA-201ENST00000230480 PAXIP1Q6ZW49 1069 aaPredicted RBP16.72■□□□□ 0.27
VEGFA-201ENST00000230480 SLF2Q8IX21 1173 aa16.72■□□□□ 0.27
VEGFA-201ENST00000230480 MIGA1Q8NAN2 632 aa16.72■□□□□ 0.27
VEGFA-201ENST00000230480 PAG1Q9NWQ8 432 aa16.72■□□□□ 0.27
VEGFA-201ENST00000230480 SNCAIPQ9Y6H5 919 aa16.72■□□□□ 0.27
VEGFA-201ENST00000230480 DDX60LQ5H9U9 1706 aaKnown RBP16.72■□□□□ 0.27
VEGFA-201ENST00000230480 PHIPQ8WWQ0 1821 aa16.72■□□□□ 0.27
VEGFA-201ENST00000230480 MYH1P12882 1939 aa16.72■□□□□ 0.27
VEGFA-201ENST00000230480 ADD2P35612 726 aa16.71■□□□□ 0.27
VEGFA-201ENST00000230480 NOGQ13253 232 aa16.71■□□□□ 0.27
VEGFA-201ENST00000230480 PICALMQ13492 652 aa16.71■□□□□ 0.27
VEGFA-201ENST00000230480 VGLL4Q14135 290 aa16.71■□□□□ 0.27
VEGFA-201ENST00000230480 TTLL12Q14166 644 aaPredicted RBP16.71■□□□□ 0.27
VEGFA-201ENST00000230480 ZKSCAN4Q969J2 545 aaPredicted RBP16.71■□□□□ 0.27
VEGFA-201ENST00000230480 GCC1Q96CN9 775 aa16.71■□□□□ 0.27
VEGFA-201ENST00000230480 OSBPL5Q9H0X9 879 aaPredicted RBP16.71■□□□□ 0.27
VEGFA-201ENST00000230480 TMOD2Q9NZR1 351 aa16.71■□□□□ 0.27
VEGFA-201ENST00000230480 STAP2Q9UGK3 403 aa16.71■□□□□ 0.27
VEGFA-201ENST00000230480 ZNF532Q9HCE3 1301 aa16.7■□□□□ 0.26
VEGFA-201ENST00000230480 COL2A1P02458 1487 aaPredicted RBP16.7■□□□□ 0.26
VEGFA-201ENST00000230480 UNCXA6NJT0 531 aa16.7■□□□□ 0.26
VEGFA-201ENST00000230480 PPP1R12BO60237 982 aaPredicted RBP16.7■□□□□ 0.26
VEGFA-201ENST00000230480 MAP4K4O95819 1239 aaPredicted RBP16.7■□□□□ 0.26
VEGFA-201ENST00000230480 JAG1P78504 1218 aa16.7■□□□□ 0.26
VEGFA-201ENST00000230480 MAP3K9P80192 1104 aa16.7■□□□□ 0.26
VEGFA-201ENST00000230480 SLC9C2Q5TAH2 1124 aa16.7■□□□□ 0.26
VEGFA-201ENST00000230480 WNK4Q96J92 1243 aa16.7■□□□□ 0.26
VEGFA-201ENST00000230480 DNAJC18Q9H819 358 aa16.7■□□□□ 0.26
VEGFA-201ENST00000230480 FAM196BA6NMK8 535 aa16.69■□□□□ 0.26
VEGFA-201ENST00000230480 SMIM22K7EJ46 135 aa16.69■□□□□ 0.26
VEGFA-201ENST00000230480 MAP3K12Q12852 859 aa16.69■□□□□ 0.26
VEGFA-201ENST00000230480 MKRN3Q13064 507 aaKnown RBP16.69■□□□□ 0.26
VEGFA-201ENST00000230480 COL13A1Q5TAT6 717 aaPredicted RBP16.69■□□□□ 0.26
VEGFA-201ENST00000230480 METTL16Q86W50 562 aaKnown RBP16.69■□□□□ 0.26
VEGFA-201ENST00000230480 MAPKAPK5Q8IW41 473 aa16.69■□□□□ 0.26
VEGFA-201ENST00000230480 TEX11Q8IYF3 940 aa16.69■□□□□ 0.26
VEGFA-201ENST00000230480 ANKRD13AQ8IZ07 590 aa16.69■□□□□ 0.26
VEGFA-201ENST00000230480 TGFBRAP1Q8WUH2 860 aa16.69■□□□□ 0.26
VEGFA-201ENST00000230480 MS4A4AQ96JQ5 239 aa16.69■□□□□ 0.26
VEGFA-201ENST00000230480 PTPN18Q99952 460 aa16.69■□□□□ 0.26
VEGFA-201ENST00000230480 ELP3Q9H9T3 547 aa16.69■□□□□ 0.26
VEGFA-201ENST00000230480 CASP8AP2Q9UKL3 1982 aa16.69■□□□□ 0.26
VEGFA-201ENST00000230480 BAZ2AQ9UIF9 1905 aaKnown RBP16.68■□□□□ 0.26
VEGFA-201ENST00000230480 HSPA8P11142 646 aaKnown RBP16.68■□□□□ 0.26
VEGFA-201ENST00000230480 PDE4AP27815 886 aa16.68■□□□□ 0.26
VEGFA-201ENST00000230480 TM4SF4P48230 202 aa16.68■□□□□ 0.26
VEGFA-201ENST00000230480 NUCB1Q02818 461 aa16.68■□□□□ 0.26
VEGFA-201ENST00000230480 TTF1Q15361 905 aaPredicted RBP16.68■□□□□ 0.26
VEGFA-201ENST00000230480 LCORLQ8N3X6 602 aa16.68■□□□□ 0.26
VEGFA-201ENST00000230480 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
VEGFA-201ENST00000230480 R3HDMLQ9H3Y0 253 aa16.68■□□□□ 0.26
VEGFA-201ENST00000230480 RWDD1Q9H446 243 aaPredicted RBP16.68■□□□□ 0.26
VEGFA-201ENST00000230480 FLT1P17948 1338 aa16.68■□□□□ 0.26
VEGFA-201ENST00000230480 TTC41PQ6P2S7 1318 aa16.68■□□□□ 0.26
VEGFA-201ENST00000230480 PTPRFP10586 1907 aa16.67■□□□□ 0.26
VEGFA-201ENST00000230480 PRKAB2O43741 272 aa16.67■□□□□ 0.26
VEGFA-201ENST00000230480 MX1P20591 662 aa16.67■□□□□ 0.26
VEGFA-201ENST00000230480 IREB2P48200 963 aaKnown RBP16.67■□□□□ 0.26
VEGFA-201ENST00000230480 PDE1AP54750 535 aa16.67■□□□□ 0.26
VEGFA-201ENST00000230480 SHROOM1Q2M3G4 852 aaPredicted RBP16.67■□□□□ 0.26
VEGFA-201ENST00000230480 B4GALNT3Q6L9W6 998 aa16.67■□□□□ 0.26
VEGFA-201ENST00000230480 SLC10A4Q96EP9 437 aa16.67■□□□□ 0.26
VEGFA-201ENST00000230480 PUS7LQ9H0K6 701 aaKnown RBP16.67■□□□□ 0.26
VEGFA-201ENST00000230480 RNF186Q9NXI6 227 aa16.67■□□□□ 0.26
VEGFA-201ENST00000230480 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.67■□□□□ 0.26
VEGFA-201ENST00000230480 TSKSQ9UJT2 592 aa16.67■□□□□ 0.26
VEGFA-201ENST00000230480 TESPA1A2RU30 521 aaPredicted RBP16.66■□□□□ 0.26
VEGFA-201ENST00000230480 SPDYE5A6NIY4 337 aa16.66■□□□□ 0.26
VEGFA-201ENST00000230480 TBC1D12O60347 775 aa16.66■□□□□ 0.26
VEGFA-201ENST00000230480 MAP2K1Q02750 393 aaPredicted RBP16.66■□□□□ 0.26
VEGFA-201ENST00000230480 MOGSQ13724 837 aa16.66■□□□□ 0.26
VEGFA-201ENST00000230480 UBE3CQ15386 1083 aa16.66■□□□□ 0.26
VEGFA-201ENST00000230480 NOL9Q5SY16 702 aaKnown RBP16.66■□□□□ 0.26
VEGFA-201ENST00000230480 PLEKHM2Q8IWE5 1019 aa16.66■□□□□ 0.26
VEGFA-201ENST00000230480 KBTBD3Q8NAB2 608 aa16.66■□□□□ 0.26
VEGFA-201ENST00000230480 OSBP2Q969R2 916 aa16.66■□□□□ 0.26
VEGFA-201ENST00000230480 WRNIP1Q96S55 665 aa16.66■□□□□ 0.26
VEGFA-201ENST00000230480 ZNF341Q9BYN7 854 aa16.66■□□□□ 0.26
VEGFA-201ENST00000230480 PALD1Q9ULE6 856 aa16.66■□□□□ 0.26
VEGFA-201ENST00000230480 IGF2BP3O00425 579 aaKnown RBP eCLIP16.65■□□□□ 0.26
VEGFA-201ENST00000230480 BAG3O95817 575 aa16.65■□□□□ 0.26
VEGFA-201ENST00000230480 TMED8Q6PL24 325 aaPredicted RBP16.65■□□□□ 0.26
VEGFA-201ENST00000230480 CHD1LQ86WJ1 897 aa16.65■□□□□ 0.26
VEGFA-201ENST00000230480 AIDAQ96BJ3 306 aa16.65■□□□□ 0.26
VEGFA-201ENST00000230480 OPTNQ96CV9 577 aa16.65■□□□□ 0.26
VEGFA-201ENST00000230480 ARMT1Q9H993 441 aa16.65■□□□□ 0.26
VEGFA-201ENST00000230480 ATAD5Q96QE3 1844 aa16.65■□□□□ 0.26
VEGFA-201ENST00000230480 DOCK1Q14185 1865 aa16.65■□□□□ 0.26
VEGFA-201ENST00000230480 ZBTB48P10074 688 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms