RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 MYL10Q9BUA6 226 aa18.79■□□□□ 0.6
LTBR-201ENST00000228918 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.79■□□□□ 0.6
LTBR-201ENST00000228918 ERVV-1B6SEH8 477 aa18.79■□□□□ 0.6
LTBR-201ENST00000228918 SFPQP23246 707 aaKnown RBP eCLIP18.79■□□□□ 0.6
LTBR-201ENST00000228918 KCNJ6P48051 423 aa18.79■□□□□ 0.6
LTBR-201ENST00000228918 FANCCQ00597 558 aa18.79■□□□□ 0.6
LTBR-201ENST00000228918 TRIM29Q14134 588 aa18.79■□□□□ 0.6
LTBR-201ENST00000228918 E4F1Q66K89 784 aaPredicted RBP18.79■□□□□ 0.6
LTBR-201ENST00000228918 SPATA5Q8NB90 893 aa18.79■□□□□ 0.6
LTBR-201ENST00000228918 INCENPQ9NQS7 918 aa18.79■□□□□ 0.6
LTBR-201ENST00000228918 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.79■□□□□ 0.6
LTBR-201ENST00000228918 MBD4O95243 580 aa18.78■□□□□ 0.6
LTBR-201ENST00000228918 LMOD1P29536 600 aaPredicted RBP18.78■□□□□ 0.6
LTBR-201ENST00000228918 HELBQ8NG08 1087 aaPredicted RBP18.78■□□□□ 0.6
LTBR-201ENST00000228918 NAPBQ9H115 298 aa18.78■□□□□ 0.6
LTBR-201ENST00000228918 CGNQ9P2M7 1197 aaKnown RBP18.78■□□□□ 0.6
LTBR-201ENST00000228918 KAT6BQ8WYB5 2073 aa18.78■□□□□ 0.6
LTBR-201ENST00000228918 CUTAO60888 179 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 KIF20AO95235 890 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 RASGRF1Q13972 1273 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 ISM2Q6H9L7 571 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 ZNF34Q8IZ26 560 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 MAGEB6Q8N7X4 407 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 KIF18AQ8NI77 898 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 CLIC6Q96NY7 704 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 FEZ1Q99689 392 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 TACC3Q9Y6A5 838 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 BCORQ6W2J9 1755 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 UBE2Q2LH0YL09 131 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 IFIT3O14879 490 aaKnown RBP18.77■□□□□ 0.6
LTBR-201ENST00000228918 SLC5A1P13866 664 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 CTDSPL2Q05D32 466 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 MAP3K12Q12852 859 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 PNOCQ13519 176 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 DZIP3Q86Y13 1208 aaKnown RBP18.77■□□□□ 0.6
LTBR-201ENST00000228918 SLC26A6Q9BXS9 759 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 ZSWIM5Q9P217 1185 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 TAOK2Q9UL54 1235 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 ZNF215Q9UL58 517 aaPredicted RBP18.77■□□□□ 0.6
LTBR-201ENST00000228918 SLC12A7Q9Y666 1083 aa18.77■□□□□ 0.6
LTBR-201ENST00000228918 PSDA5PKW4 1024 aaPredicted RBP18.76■□□□□ 0.59
LTBR-201ENST00000228918 SPDYE4A6NLX3 237 aa18.76■□□□□ 0.59
LTBR-201ENST00000228918 FMNL1O95466 1100 aaPredicted RBP18.76■□□□□ 0.59
LTBR-201ENST00000228918 ATP1A3P13637 1013 aa18.76■□□□□ 0.59
LTBR-201ENST00000228918 IL6STP40189 918 aaPredicted RBP18.76■□□□□ 0.59
LTBR-201ENST00000228918 SSRP1Q08945 709 aaKnown RBP18.76■□□□□ 0.59
LTBR-201ENST00000228918 METTL16Q86W50 562 aaKnown RBP18.76■□□□□ 0.59
LTBR-201ENST00000228918 PPP1R13BQ96KQ4 1090 aa18.76■□□□□ 0.59
LTBR-201ENST00000228918 CNNM2Q9H8M5 875 aa18.76■□□□□ 0.59
LTBR-201ENST00000228918 IFNAR1P17181 557 aa18.76■□□□□ 0.59
LTBR-201ENST00000228918 MYL5Q02045 173 aa18.76■□□□□ 0.59
LTBR-201ENST00000228918 AKNAD1Q5T1N1 836 aa18.76■□□□□ 0.59
LTBR-201ENST00000228918 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
LTBR-201ENST00000228918 ARMT1Q9H993 441 aa18.76■□□□□ 0.59
LTBR-201ENST00000228918 A0A0U1RQG5 324 aaPredicted RBP18.75■□□□□ 0.59
LTBR-201ENST00000228918 AK7Q96M32 723 aa18.75■□□□□ 0.59
LTBR-201ENST00000228918 KRT23Q9C075 422 aa18.75■□□□□ 0.59
LTBR-201ENST00000228918 BTG4Q9NY30 223 aa18.75■□□□□ 0.59
LTBR-201ENST00000228918 PLCH1Q4KWH8 1693 aa18.75■□□□□ 0.59
LTBR-201ENST00000228918 GSG1L2A8MUP6 293 aa18.75■□□□□ 0.59
LTBR-201ENST00000228918 KRBA2Q6ZNG9 492 aa18.75■□□□□ 0.59
LTBR-201ENST00000228918 NOSTRINQ8IVI9 506 aa18.75■□□□□ 0.59
LTBR-201ENST00000228918 WASF1Q92558 559 aa18.75■□□□□ 0.59
LTBR-201ENST00000228918 NRDCO43847 1150 aa18.74■□□□□ 0.59
LTBR-201ENST00000228918 LONRF3Q496Y0 759 aa18.74■□□□□ 0.59
LTBR-201ENST00000228918 ERO1AQ96HE7 468 aa18.74■□□□□ 0.59
LTBR-201ENST00000228918 KCNH3Q9ULD8 1083 aa18.74■□□□□ 0.59
LTBR-201ENST00000228918 MMP1P03956 469 aa18.74■□□□□ 0.59
LTBR-201ENST00000228918 KRI1Q8N9T8 703 aaKnown RBP18.74■□□□□ 0.59
LTBR-201ENST00000228918 STAG1Q8WVM7 1258 aa18.74■□□□□ 0.59
LTBR-201ENST00000228918 SNAP23O00161 211 aa18.73■□□□□ 0.59
LTBR-201ENST00000228918 CBFA2T2O43439 604 aa18.73■□□□□ 0.59
LTBR-201ENST00000228918 GUCY1A2P33402 732 aa18.73■□□□□ 0.59
LTBR-201ENST00000228918 MFSD6Q6ZSS7 791 aa18.73■□□□□ 0.59
LTBR-201ENST00000228918 ELOA2Q8IYF1 753 aaPredicted RBP18.73■□□□□ 0.59
LTBR-201ENST00000228918 CNNM3Q8NE01 707 aa18.73■□□□□ 0.59
LTBR-201ENST00000228918 DPF2Q92785 391 aa18.73■□□□□ 0.59
LTBR-201ENST00000228918 PNPLA7Q6ZV29 1317 aa18.73■□□□□ 0.59
LTBR-201ENST00000228918 STRCQ7RTU9 1775 aa18.73■□□□□ 0.59
LTBR-201ENST00000228918 MYO1BO43795 1136 aa18.72■□□□□ 0.59
LTBR-201ENST00000228918 SLU7O95391 586 aaKnown RBP18.72■□□□□ 0.59
LTBR-201ENST00000228918 UBASH3AP57075 661 aa18.72■□□□□ 0.59
LTBR-201ENST00000228918 FOXP4Q8IVH2 680 aaPredicted RBP18.72■□□□□ 0.59
LTBR-201ENST00000228918 STK11IPQ8N1F8 1099 aa18.72■□□□□ 0.59
LTBR-201ENST00000228918 LCORLQ8N3X6 602 aa18.72■□□□□ 0.59
LTBR-201ENST00000228918 OGFRQ9NZT2 677 aa18.72■□□□□ 0.59
LTBR-201ENST00000228918 PHLPP1O60346 1717 aa18.72■□□□□ 0.59
LTBR-201ENST00000228918 BTBD18B2RXH4 712 aa18.72■□□□□ 0.59
LTBR-201ENST00000228918 PRKAB2O43741 272 aa18.72■□□□□ 0.59
LTBR-201ENST00000228918 OLFM4Q6UX06 510 aa18.72■□□□□ 0.59
LTBR-201ENST00000228918 DIS3L2Q8IYB7 885 aaKnown RBP18.72■□□□□ 0.59
LTBR-201ENST00000228918 PCDHA5Q9Y5H7 936 aa18.72■□□□□ 0.59
LTBR-201ENST00000228918 DOT1LQ8TEK3 1739 aa18.72■□□□□ 0.59
LTBR-201ENST00000228918 SERPINC1P01008 464 aa18.71■□□□□ 0.59
LTBR-201ENST00000228918 GNAT2P19087 354 aa18.71■□□□□ 0.59
LTBR-201ENST00000228918 TDO2P48775 406 aa18.71■□□□□ 0.59
LTBR-201ENST00000228918 TOB1P50616 345 aaPredicted RBP18.71■□□□□ 0.59
LTBR-201ENST00000228918 RTN1Q16799 776 aa18.71■□□□□ 0.59
LTBR-201ENST00000228918 MPHOSPH8Q99549 860 aa18.71■□□□□ 0.59
LTBR-201ENST00000228918 L2HGDHQ9H9P8 463 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms