RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 ABCC12Q96J65 1359 aa17.72■□□□□ 0.43
VTN-201ENST00000226218 SH2B2O14492 632 aaPredicted RBP17.72■□□□□ 0.43
VTN-201ENST00000226218 NTRK3Q16288 839 aa17.72■□□□□ 0.43
VTN-201ENST00000226218 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.72■□□□□ 0.43
VTN-201ENST00000226218 PUS3Q9BZE2 481 aaKnown RBP17.72■□□□□ 0.43
VTN-201ENST00000226218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.72■□□□□ 0.43
VTN-201ENST00000226218 COL18A1P39060 1754 aa17.71■□□□□ 0.43
VTN-201ENST00000226218 USP5P45974 858 aa17.71■□□□□ 0.43
VTN-201ENST00000226218 GNL2Q13823 731 aaKnown RBP17.71■□□□□ 0.43
VTN-201ENST00000226218 NR1I3Q14994 352 aa17.71■□□□□ 0.43
VTN-201ENST00000226218 GOLGA5Q8TBA6 731 aa17.71■□□□□ 0.43
VTN-201ENST00000226218 CWC25Q9NXE8 425 aaPredicted RBP17.71■□□□□ 0.43
VTN-201ENST00000226218 RAB21Q9UL25 225 aa17.71■□□□□ 0.43
VTN-201ENST00000226218 DENND2AQ9ULE3 1009 aa17.71■□□□□ 0.43
VTN-201ENST00000226218 ANGEL1Q9UNK9 670 aaKnown RBP17.71■□□□□ 0.43
VTN-201ENST00000226218 NFE2L3Q9Y4A8 694 aa17.71■□□□□ 0.43
VTN-201ENST00000226218 MST1RQ04912 1400 aa17.71■□□□□ 0.43
VTN-201ENST00000226218 UBR2Q8IWV8 1755 aa17.71■□□□□ 0.43
VTN-201ENST00000226218 ZNF213O14771 459 aa17.71■□□□□ 0.42
VTN-201ENST00000226218 CDKL5O76039 1030 aa17.71■□□□□ 0.42
VTN-201ENST00000226218 FKBP4Q02790 459 aaKnown RBP eCLIP17.71■□□□□ 0.42
VTN-201ENST00000226218 MORC3Q14149 939 aa17.71■□□□□ 0.42
VTN-201ENST00000226218 WASHC4Q2M389 1173 aa17.71■□□□□ 0.42
VTN-201ENST00000226218 SRGAP1Q7Z6B7 1085 aa17.71■□□□□ 0.42
VTN-201ENST00000226218 TTC5Q8N0Z6 440 aa17.71■□□□□ 0.42
VTN-201ENST00000226218 PDILTQ8N807 584 aa17.71■□□□□ 0.42
VTN-201ENST00000226218 MSANTD4Q8NCY6 345 aa17.71■□□□□ 0.42
VTN-201ENST00000226218 DESI2Q9BSY9 194 aa17.71■□□□□ 0.42
VTN-201ENST00000226218 ANKZF1Q9H8Y5 726 aa17.71■□□□□ 0.42
VTN-201ENST00000226218 PLEKHG2Q9H7P9 1386 aa17.7■□□□□ 0.42
VTN-201ENST00000226218 ALS2Q96Q42 1657 aa17.7■□□□□ 0.42
VTN-201ENST00000226218 NBPF26B4DH59 902 aa17.7■□□□□ 0.42
VTN-201ENST00000226218 METAP2P50579 478 aaKnown RBP eCLIP17.7■□□□□ 0.42
VTN-201ENST00000226218 SCARF1Q14162 830 aa17.7■□□□□ 0.42
VTN-201ENST00000226218 BEND6Q5SZJ8 279 aaPredicted RBP17.7■□□□□ 0.42
VTN-201ENST00000226218 NBPF14Q5TI25 921 aa17.7■□□□□ 0.42
VTN-201ENST00000226218 NBPF10Q6P3W6 841 aaKnown RBP17.7■□□□□ 0.42
VTN-201ENST00000226218 CYB5R4Q7L1T6 521 aa17.7■□□□□ 0.42
VTN-201ENST00000226218 IFNL2Q8IZJ0 200 aa17.7■□□□□ 0.42
VTN-201ENST00000226218 STK11IPQ8N1F8 1099 aa17.7■□□□□ 0.42
VTN-201ENST00000226218 NBPF15Q8N660 670 aa17.7■□□□□ 0.42
VTN-201ENST00000226218 MLKLQ8NB16 471 aa17.7■□□□□ 0.42
VTN-201ENST00000226218 RAPGEF4Q8WZA2 1011 aa17.7■□□□□ 0.42
VTN-201ENST00000226218 RAI14Q9P0K7 980 aa17.7■□□□□ 0.42
VTN-201ENST00000226218 ATRNO75882 1429 aa17.7■□□□□ 0.42
VTN-201ENST00000226218 A0A1B0GTH6 734 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 GPAA1O43292 621 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 ADORA1P30542 326 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 GYS2P54840 703 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 MTF1Q14872 753 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 KARSQ15046 597 aaKnown RBP17.69■□□□□ 0.42
VTN-201ENST00000226218 POSTNQ15063 836 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 TTC39AQ5SRH9 613 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 APOA5Q6Q788 366 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 APTXQ7Z2E3 356 aaKnown RBP17.69■□□□□ 0.42
VTN-201ENST00000226218 CCDC12Q8WUD4 166 aaPredicted RBP17.69■□□□□ 0.42
VTN-201ENST00000226218 RBM33Q96EV2 1170 aaKnown RBP17.69■□□□□ 0.42
VTN-201ENST00000226218 AK7Q96M32 723 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 PANX2Q96RD6 677 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 TEX13AQ9BXU3 409 aaPredicted RBP17.69■□□□□ 0.42
VTN-201ENST00000226218 CHD4Q14839 1912 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 LRP6O75581 1613 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 RANBP6O60518 1105 aaKnown RBP17.69■□□□□ 0.42
VTN-201ENST00000226218 PRR29P0C7W0 189 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 HSP90AA4PQ58FG1 418 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 TBC1D10CQ8IV04 446 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 KRI1Q8N9T8 703 aaKnown RBP17.69■□□□□ 0.42
VTN-201ENST00000226218 PHKBQ93100 1093 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 TRIM34Q9BYJ4 488 aa17.69■□□□□ 0.42
VTN-201ENST00000226218 IRX2Q9BZI1 471 aaPredicted RBP17.69■□□□□ 0.42
VTN-201ENST00000226218 FAM217BQ9NTX9 383 aaPredicted RBP17.69■□□□□ 0.42
VTN-201ENST00000226218 STK36Q9NRP7 1315 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 CCDC175P0C221 793 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 CHMP4BP1P59074 171 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 TRIML1Q8N9V2 468 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 CCDC191Q8NCU4 936 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 XAGE2Q96GT9 111 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 DCAF5Q96JK2 942 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 ADGRG1Q9Y653 693 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 UBN2Q6ZU65 1347 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 TATP17735 454 aaPredicted RBP17.68■□□□□ 0.42
VTN-201ENST00000226218 HSP90AB3PQ58FF7 597 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 TTLL7Q6ZT98 887 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 NUTM2AQ8IVF1 878 aaPredicted RBP17.68■□□□□ 0.42
VTN-201ENST00000226218 SPATA20Q8TB22 786 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 ORAI2Q96SN7 254 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 SENP2Q9HC62 589 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 SAMSN1Q9NSI8 373 aaKnown RBP17.68■□□□□ 0.42
VTN-201ENST00000226218 LCMT1Q9UIC8 334 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 CDC23Q9UJX2 597 aa17.68■□□□□ 0.42
VTN-201ENST00000226218 FBXO2Q9UK22 296 aaPredicted RBP17.68■□□□□ 0.42
VTN-201ENST00000226218 SOWAHDA6NJG2 315 aa17.67■□□□□ 0.42
VTN-201ENST00000226218 MYO1CO00159 1063 aa17.67■□□□□ 0.42
VTN-201ENST00000226218 CYP27B1O15528 508 aa17.67■□□□□ 0.42
VTN-201ENST00000226218 ACTN2P35609 894 aa17.67■□□□□ 0.42
VTN-201ENST00000226218 PBX1P40424 430 aa17.67■□□□□ 0.42
VTN-201ENST00000226218 ZAP70P43403 619 aa17.67■□□□□ 0.42
VTN-201ENST00000226218 RAD9BQ6WBX8 426 aa17.67■□□□□ 0.42
VTN-201ENST00000226218 IPO4Q8TEX9 1081 aaKnown RBP17.67■□□□□ 0.42
VTN-201ENST00000226218 CEP126Q9P2H0 1117 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms