RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CCDC144BQ3MJ40 725 aa25.43■■□□□ 1.66
SMARCD2-201ENST00000225742 CCDC144CPQ8IYA2 1237 aa25.43■■□□□ 1.66
SMARCD2-201ENST00000225742 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.43■■□□□ 1.66
SMARCD2-201ENST00000225742 SENP2Q9HC62 589 aa25.43■■□□□ 1.66
SMARCD2-201ENST00000225742 IMPACTQ9P2X3 320 aa25.43■■□□□ 1.66
SMARCD2-201ENST00000225742 NIP7Q9Y221 180 aaKnown RBP eCLIP25.43■■□□□ 1.66
SMARCD2-201ENST00000225742 HPSEQ9Y251 543 aa25.43■■□□□ 1.66
SMARCD2-201ENST00000225742 SLC4A4Q9Y6R1 1079 aa25.43■■□□□ 1.66
SMARCD2-201ENST00000225742 CUTAO60888 179 aa25.42■■□□□ 1.66
SMARCD2-201ENST00000225742 TDO2P48775 406 aa25.42■■□□□ 1.66
SMARCD2-201ENST00000225742 GSDMDP57764 484 aa25.42■■□□□ 1.66
SMARCD2-201ENST00000225742 LRRC8AQ8IWT6 810 aa25.42■■□□□ 1.66
SMARCD2-201ENST00000225742 PHKBQ93100 1093 aa25.42■■□□□ 1.66
SMARCD2-201ENST00000225742 AIFM3Q96NN9 605 aa25.42■■□□□ 1.66
SMARCD2-201ENST00000225742 MAP3K14Q99558 947 aa25.42■■□□□ 1.66
SMARCD2-201ENST00000225742 CCDC196A0A1B0GTZ2 297 aa25.42■■□□□ 1.66
SMARCD2-201ENST00000225742 RGL2O15211 777 aa25.42■■□□□ 1.66
SMARCD2-201ENST00000225742 RANBP6O60518 1105 aaKnown RBP25.42■■□□□ 1.66
SMARCD2-201ENST00000225742 BCAMP50895 628 aa25.42■■□□□ 1.66
SMARCD2-201ENST00000225742 CHRNDQ07001 517 aa25.42■■□□□ 1.66
SMARCD2-201ENST00000225742 CLEC4GQ6UXB4 293 aa25.42■■□□□ 1.66
SMARCD2-201ENST00000225742 GNL3LQ9NVN8 582 aaKnown RBP25.42■■□□□ 1.66
SMARCD2-201ENST00000225742 BCL9LQ86UU0 1499 aa25.41■■□□□ 1.66
SMARCD2-201ENST00000225742 WDHD1O75717 1129 aaPredicted RBP25.41■■□□□ 1.66
SMARCD2-201ENST00000225742 SYKP43405 635 aa25.41■■□□□ 1.66
SMARCD2-201ENST00000225742 ITPK1Q13572 414 aa25.41■■□□□ 1.66
SMARCD2-201ENST00000225742 ELOA2Q8IYF1 753 aaPredicted RBP25.41■■□□□ 1.66
SMARCD2-201ENST00000225742 LCORLQ8N3X6 602 aa25.41■■□□□ 1.66
SMARCD2-201ENST00000225742 ERICH2A1L162 156 aa25.4■■□□□ 1.66
SMARCD2-201ENST00000225742 WTAPQ15007 396 aa25.4■■□□□ 1.66
SMARCD2-201ENST00000225742 SAFBQ15424 915 aaKnown RBP eCLIP25.4■■□□□ 1.66
SMARCD2-201ENST00000225742 TRIM22Q8IYM9 498 aa25.4■■□□□ 1.66
SMARCD2-201ENST00000225742 LRP2BPQ9P2M1 347 aa25.4■■□□□ 1.66
SMARCD2-201ENST00000225742 MYH14Q7Z406 1995 aaKnown RBP25.4■■□□□ 1.66
SMARCD2-201ENST00000225742 ZNF804BA4D1E1 1349 aa25.4■■□□□ 1.66
SMARCD2-201ENST00000225742 RXRAP19793 462 aa25.4■■□□□ 1.66
SMARCD2-201ENST00000225742 PPP2R5BQ15173 497 aa25.4■■□□□ 1.66
SMARCD2-201ENST00000225742 RESP18Q5W5W9 173 aa25.4■■□□□ 1.66
SMARCD2-201ENST00000225742 MARCH10Q8NA82 808 aaPredicted RBP25.4■■□□□ 1.66
SMARCD2-201ENST00000225742 SLC26A6Q9BXS9 759 aa25.4■■□□□ 1.66
SMARCD2-201ENST00000225742 TUBE1Q9UJT0 475 aa25.4■■□□□ 1.66
SMARCD2-201ENST00000225742 ANAPC4Q9UJX5 808 aa25.4■■□□□ 1.66
SMARCD2-201ENST00000225742 FAM177BA6PVY3 158 aa25.39■■□□□ 1.65
SMARCD2-201ENST00000225742 IKBKBO14920 756 aa25.39■■□□□ 1.65
SMARCD2-201ENST00000225742 RTN1Q16799 776 aa25.39■■□□□ 1.65
SMARCD2-201ENST00000225742 OSBPL5Q9H0X9 879 aaPredicted RBP25.39■■□□□ 1.65
SMARCD2-201ENST00000225742 TACC3Q9Y6A5 838 aa25.39■■□□□ 1.65
SMARCD2-201ENST00000225742 COL5A3P25940 1745 aaPredicted RBP25.39■■□□□ 1.65
SMARCD2-201ENST00000225742 MROH7-TTC4A0A0A0MT08 1334 aa25.38■■□□□ 1.65
SMARCD2-201ENST00000225742 DPCR1Q3MIW9 517 aa25.38■■□□□ 1.65
SMARCD2-201ENST00000225742 BARGINQ6ZT62 677 aa25.38■■□□□ 1.65
SMARCD2-201ENST00000225742 KCND1Q9NSA2 647 aa25.38■■□□□ 1.65
SMARCD2-201ENST00000225742 MARCKSP29966 332 aaPredicted RBP25.37■■□□□ 1.65
SMARCD2-201ENST00000225742 UBE4AQ14139 1066 aa25.37■■□□□ 1.65
SMARCD2-201ENST00000225742 UBE2Q2Q8WVN8 375 aa25.37■■□□□ 1.65
SMARCD2-201ENST00000225742 PAXBP1Q9Y5B6 917 aa25.37■■□□□ 1.65
SMARCD2-201ENST00000225742 A0A1B0GUL6 1792 aa25.37■■□□□ 1.65
SMARCD2-201ENST00000225742 SNAP23O00161 211 aa25.37■■□□□ 1.65
SMARCD2-201ENST00000225742 PRKAB2O43741 272 aa25.37■■□□□ 1.65
SMARCD2-201ENST00000225742 MYO1BO43795 1136 aa25.37■■□□□ 1.65
SMARCD2-201ENST00000225742 SF3B3Q15393 1217 aaKnown RBP25.37■■□□□ 1.65
SMARCD2-201ENST00000225742 SHC4Q6S5L8 630 aa25.37■■□□□ 1.65
SMARCD2-201ENST00000225742 NOSTRINQ8IVI9 506 aa25.37■■□□□ 1.65
SMARCD2-201ENST00000225742 ACSBG1Q96GR2 724 aa25.37■■□□□ 1.65
SMARCD2-201ENST00000225742 FOXP1Q9H334 677 aaPredicted RBP25.37■■□□□ 1.65
SMARCD2-201ENST00000225742 INCENPQ9NQS7 918 aa25.37■■□□□ 1.65
SMARCD2-201ENST00000225742 SPATA31A5Q5VU36 1347 aa25.36■■□□□ 1.65
SMARCD2-201ENST00000225742 SPATA31A7Q8IWB4 1347 aa25.36■■□□□ 1.65
SMARCD2-201ENST00000225742 DEXIO95424 95 aa25.36■■□□□ 1.65
SMARCD2-201ENST00000225742 MMP1P03956 469 aa25.36■■□□□ 1.65
SMARCD2-201ENST00000225742 ERCC4Q92889 916 aaPredicted RBP25.36■■□□□ 1.65
SMARCD2-201ENST00000225742 NOL10Q9BSC4 688 aaKnown RBP25.36■■□□□ 1.65
SMARCD2-201ENST00000225742 CYP7A1P22680 504 aa25.35■■□□□ 1.65
SMARCD2-201ENST00000225742 PPARAQ07869 468 aa25.35■■□□□ 1.65
SMARCD2-201ENST00000225742 ANKRD18AQ8IVF6 992 aa25.35■■□□□ 1.65
SMARCD2-201ENST00000225742 MYL10Q9BUA6 226 aa25.35■■□□□ 1.65
SMARCD2-201ENST00000225742 A0A087WWV3 80 aa25.35■■□□□ 1.65
SMARCD2-201ENST00000225742 RIOK3O14730 519 aaKnown RBP25.35■■□□□ 1.65
SMARCD2-201ENST00000225742 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.34■■□□□ 1.65
SMARCD2-201ENST00000225742 MAGEB6P1A0A0J9YX57 407 aa25.34■■□□□ 1.65
SMARCD2-201ENST00000225742 PCP11498 1178 aaKnown RBP25.34■■□□□ 1.65
SMARCD2-201ENST00000225742 TPD52L1Q16890 204 aaPredicted RBP25.34■■□□□ 1.65
SMARCD2-201ENST00000225742 RILPL1Q5EBL4 403 aa25.34■■□□□ 1.65
SMARCD2-201ENST00000225742 CRACR2BQ8N4Y2 399 aaPredicted RBP25.34■■□□□ 1.65
SMARCD2-201ENST00000225742 KRI1Q8N9T8 703 aaKnown RBP25.34■■□□□ 1.65
SMARCD2-201ENST00000225742 BSDC1Q9NW68 430 aaPredicted RBP25.34■■□□□ 1.65
SMARCD2-201ENST00000225742 HOOK1Q9UJC3 728 aaKnown RBP25.34■■□□□ 1.65
SMARCD2-201ENST00000225742 CTIFO43310 598 aaKnown RBP25.33■■□□□ 1.65
SMARCD2-201ENST00000225742 SKILP12757 684 aa25.33■■□□□ 1.65
SMARCD2-201ENST00000225742 TNNT1P13805 278 aa25.33■■□□□ 1.65
SMARCD2-201ENST00000225742 RRP12Q5JTH9 1297 aaKnown RBP25.33■■□□□ 1.65
SMARCD2-201ENST00000225742 NBPF11Q86T75 865 aa25.33■■□□□ 1.65
SMARCD2-201ENST00000225742 CCDC150Q8NCX0 1101 aa25.33■■□□□ 1.65
SMARCD2-201ENST00000225742 ESR2Q92731 530 aa25.33■■□□□ 1.65
SMARCD2-201ENST00000225742 UBAC1Q9BSL1 405 aa25.33■■□□□ 1.65
SMARCD2-201ENST00000225742 TOMM22Q9NS69 142 aa25.33■■□□□ 1.65
SMARCD2-201ENST00000225742 MORC2Q9Y6X9 1032 aaPredicted RBP25.33■■□□□ 1.65
SMARCD2-201ENST00000225742 A0A0G2JS52 829 aa25.33■■□□□ 1.64
SMARCD2-201ENST00000225742 NCAPHQ15003 741 aa25.33■■□□□ 1.64
SMARCD2-201ENST00000225742 SYCP1Q15431 976 aa25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms