RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 DHX16O60231 1041 aaKnown RBP16.39■□□□□ 0.21
SFXN3-201ENST00000224807 ACTN2P35609 894 aa16.39■□□□□ 0.21
SFXN3-201ENST00000224807 VSNL1P62760 191 aa16.39■□□□□ 0.21
SFXN3-201ENST00000224807 MAP3K9P80192 1104 aa16.39■□□□□ 0.21
SFXN3-201ENST00000224807 SPECC1LQ69YQ0 1117 aa16.39■□□□□ 0.21
SFXN3-201ENST00000224807 SRLQ86TD4 932 aa16.39■□□□□ 0.21
SFXN3-201ENST00000224807 PUS7LQ9H0K6 701 aaKnown RBP16.39■□□□□ 0.21
SFXN3-201ENST00000224807 GUCA1BQ9UMX6 200 aa16.39■□□□□ 0.21
SFXN3-201ENST00000224807 UTYO14607 1347 aa16.38■□□□□ 0.21
SFXN3-201ENST00000224807 CCDC175P0C221 793 aa16.38■□□□□ 0.21
SFXN3-201ENST00000224807 DHX8Q14562 1220 aaKnown RBP16.38■□□□□ 0.21
SFXN3-201ENST00000224807 IGSF22Q8N9C0 903 aa16.38■□□□□ 0.21
SFXN3-201ENST00000224807 TC2NQ8N9U0 490 aa16.38■□□□□ 0.21
SFXN3-201ENST00000224807 RNF113AO15541 343 aaKnown RBP16.38■□□□□ 0.21
SFXN3-201ENST00000224807 TPM1P09493 284 aa16.38■□□□□ 0.21
SFXN3-201ENST00000224807 SCARF1Q14162 830 aa16.38■□□□□ 0.21
SFXN3-201ENST00000224807 MICALL1Q8N3F8 863 aa16.38■□□□□ 0.21
SFXN3-201ENST00000224807 ANKRD24Q8TF21 1146 aa16.38■□□□□ 0.21
SFXN3-201ENST00000224807 TRIM10Q9UDY6 481 aa16.38■□□□□ 0.21
SFXN3-201ENST00000224807 YEATS4O95619 227 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 RBL2Q08999 1139 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 RAD9BQ6WBX8 426 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 SLF1Q9BQI6 1058 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 POLR3EQ9NVU0 708 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 NEDD4P46934 1319 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 SRGAP2O75044 1071 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 MATR3P43243 847 aaKnown RBP eCLIP16.37■□□□□ 0.21
SFXN3-201ENST00000224807 ZNF790Q6PG37 636 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 NOA1Q8NC60 698 aaKnown RBP16.37■□□□□ 0.21
SFXN3-201ENST00000224807 IP6K1Q92551 441 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 VPS16Q9H269 839 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 FAM204AQ9H8W3 233 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 LTN1O94822 1766 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 DNA2P51530 1060 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 NR5A1Q13285 461 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 GOLGA5Q8TBA6 731 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 HDAC6Q9UBN7 1215 aa16.37■□□□□ 0.21
SFXN3-201ENST00000224807 HOOK1Q9UJC3 728 aaKnown RBP16.37■□□□□ 0.21
SFXN3-201ENST00000224807 SLIT1O75093 1534 aa16.36■□□□□ 0.21
SFXN3-201ENST00000224807 CASP14P31944 242 aa16.36■□□□□ 0.21
SFXN3-201ENST00000224807 ZAP70P43403 619 aa16.36■□□□□ 0.21
SFXN3-201ENST00000224807 SLC39A14Q15043 492 aa16.36■□□□□ 0.21
SFXN3-201ENST00000224807 PDIA6Q15084 440 aa16.36■□□□□ 0.21
SFXN3-201ENST00000224807 SLC9C2Q5TAH2 1124 aa16.36■□□□□ 0.21
SFXN3-201ENST00000224807 ZNF274Q96GC6 653 aaPredicted RBP16.36■□□□□ 0.21
SFXN3-201ENST00000224807 PSMB7Q99436 277 aa16.36■□□□□ 0.21
SFXN3-201ENST00000224807 METTL22Q9BUU2 404 aaPredicted RBP16.36■□□□□ 0.21
SFXN3-201ENST00000224807 MYH15Q9Y2K3 1946 aa16.36■□□□□ 0.21
SFXN3-201ENST00000224807 USP54Q70EL1 1684 aa16.36■□□□□ 0.21
SFXN3-201ENST00000224807 A0A0G2JS52 829 aa16.36■□□□□ 0.21
SFXN3-201ENST00000224807 IARSP41252 1262 aaKnown RBP16.36■□□□□ 0.21
SFXN3-201ENST00000224807 KCTD19Q17RG1 926 aaPredicted RBP16.36■□□□□ 0.21
SFXN3-201ENST00000224807 JMYQ8N9B5 988 aa16.36■□□□□ 0.21
SFXN3-201ENST00000224807 RABGGTAQ92696 567 aa16.36■□□□□ 0.21
SFXN3-201ENST00000224807 HPS5Q9UPZ3 1129 aa16.36■□□□□ 0.21
SFXN3-201ENST00000224807 LOC102724159A0A0B4J2E5 919 aa16.35■□□□□ 0.21
SFXN3-201ENST00000224807 A1BGP04217 495 aa16.35■□□□□ 0.21
SFXN3-201ENST00000224807 PWP2Q15269 919 aaKnown RBP16.35■□□□□ 0.21
SFXN3-201ENST00000224807 TTC31Q49AM3 519 aaPredicted RBP16.35■□□□□ 0.21
SFXN3-201ENST00000224807 NCOA7Q8NI08 942 aa16.35■□□□□ 0.21
SFXN3-201ENST00000224807 NUP88Q99567 741 aaPredicted RBP16.35■□□□□ 0.21
SFXN3-201ENST00000224807 TSPYL1Q9H0U9 437 aa16.35■□□□□ 0.21
SFXN3-201ENST00000224807 SEC31BQ9NQW1 1179 aa16.35■□□□□ 0.21
SFXN3-201ENST00000224807 MAN1B1Q9UKM7 699 aa16.35■□□□□ 0.21
SFXN3-201ENST00000224807 PHF8Q9UPP1 1060 aa16.35■□□□□ 0.21
SFXN3-201ENST00000224807 LMO7Q8WWI1 1683 aa16.35■□□□□ 0.21
SFXN3-201ENST00000224807 GOLGA8AA7E2F4 631 aa16.35■□□□□ 0.21
SFXN3-201ENST00000224807 AKR1B15C9JRZ8 316 aaPredicted RBP16.35■□□□□ 0.21
SFXN3-201ENST00000224807 LIG3P49916 1009 aa16.35■□□□□ 0.21
SFXN3-201ENST00000224807 TMEM139Q8IV31 216 aa16.35■□□□□ 0.21
SFXN3-201ENST00000224807 TEX13AQ9BXU3 409 aaPredicted RBP16.35■□□□□ 0.21
SFXN3-201ENST00000224807 COPRSQ9NQ92 184 aa16.35■□□□□ 0.21
SFXN3-201ENST00000224807 CUTAO60888 179 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 GUCY1A2P33402 732 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 ANTXR2P58335 489 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 ZMYM1Q5SVZ6 1142 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 TTLL7Q6ZT98 887 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 HDXQ7Z353 690 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 RAPGEF4Q8WZA2 1011 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 CEP126Q9P2H0 1117 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 RGPD2P0DJD1 1756 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 EIF3CLB5ME19 914 aaKnown RBP16.34■□□□□ 0.21
SFXN3-201ENST00000224807 ERCC3P19447 782 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 CASP8Q14790 479 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 POSTNQ15063 836 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 CPLX2Q6PUV4 134 aaKnown RBP16.34■□□□□ 0.21
SFXN3-201ENST00000224807 PACS2Q86VP3 889 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 EIF3CQ99613 913 aaKnown RBP16.34■□□□□ 0.21
SFXN3-201ENST00000224807 EHD4Q9H223 541 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 BLZF1Q9H2G9 400 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 ANKZF1Q9H8Y5 726 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 AXIN2Q9Y2T1 843 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 HEG1Q9ULI3 1381 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 MRC1P22897 1456 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 PXDNQ92626 1479 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 IKBKBO14920 756 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 GPAA1O43292 621 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 ERLIN1O75477 346 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 EIF3JO75822 258 aaKnown RBP16.34■□□□□ 0.21
SFXN3-201ENST00000224807 BRAPQ7Z569 592 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms