RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 TMX3Q96JJ7 454 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 EYA1Q99502 592 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 ARMT1Q9H993 441 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 TBX22Q9Y458 520 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 VWA3AA6NCI4 1184 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 STX17P56962 302 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 ZNF174Q15697 407 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 CCDC184Q52MB2 194 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 C20orf194Q5TEA3 1177 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 ZNF772Q68DY9 489 aaPredicted RBP11.81□□□□□ -0.52
TRPS1-201ENST00000220888 BRAPQ7Z569 592 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 BICC1Q9H694 974 aaKnown RBP11.81□□□□□ -0.52
TRPS1-201ENST00000220888 ARHGEF10O15013 1369 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 CCNT1O60563 726 aaKnown RBP11.81□□□□□ -0.52
TRPS1-201ENST00000220888 C8orf58Q8NAV2 365 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 HELLSQ9NRZ9 838 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 USP40Q9NVE5 1235 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 OATP04181 439 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 RXRBP28702 533 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 CLUL1Q15846 466 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 ZNF790Q6PG37 636 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 PRXQ9BXM0 1461 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 A2MP01023 1474 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 A0A1B0GUL7 405 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 PPP2R5DQ14738 602 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 VWA3BQ502W6 1294 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 OTUD6AQ7L8S5 288 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 TTF2Q9UNY4 1162 aaKnown RBP11.8□□□□□ -0.52
TRPS1-201ENST00000220888 URB2Q14146 1524 aaKnown RBP11.8□□□□□ -0.52
TRPS1-201ENST00000220888 ATP2C2O75185 946 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 GTF2IP78347 998 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 CCNA1P78396 465 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 MAPKAPK5Q8IW41 473 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 ABI1Q8IZP0 508 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 GPR161Q8N6U8 529 aaKnown RBP11.8□□□□□ -0.52
TRPS1-201ENST00000220888 CCDC89Q8N998 374 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 TXKP42681 527 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 SELENOSQ9BQE4 189 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 TRPC5Q9UL62 973 aaPredicted RBP11.8□□□□□ -0.52
TRPS1-201ENST00000220888 UAP1Q16222 522 aaPredicted RBP11.8□□□□□ -0.52
TRPS1-201ENST00000220888 MED10Q9BTT4 135 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 QTRT2Q9H974 415 aaKnown RBP11.8□□□□□ -0.52
TRPS1-201ENST00000220888 TTLL3Q9Y4R7 772 aa11.8□□□□□ -0.52
TRPS1-201ENST00000220888 YARSP54577 528 aaKnown RBP11.79□□□□□ -0.52
TRPS1-201ENST00000220888 YWHAEP62258 255 aaKnown RBP11.79□□□□□ -0.52
TRPS1-201ENST00000220888 DCUN1D2Q6PH85 259 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 NCAPG2Q86XI2 1143 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 DEPTORQ8TB45 409 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 CCDC110Q8TBZ0 833 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 ABT1Q9ULW3 272 aaKnown RBP11.79□□□□□ -0.52
TRPS1-201ENST00000220888 DNM3Q9UQ16 869 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 LUC7L2Q9Y383 392 aaKnown RBP11.79□□□□□ -0.52
TRPS1-201ENST00000220888 CETN3O15182 167 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 CNNM4Q6P4Q7 775 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 GIMAP6Q6P9H5 292 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 AFAP1L2Q8N4X5 818 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 AOPEPQ8N6M6 819 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 TMEM87BQ96K49 555 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 PPP1R9BQ96SB3 815 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 ADPGKQ9BRR6 497 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 SPDYE16A6NNV3 312 aaPredicted RBP11.79□□□□□ -0.52
TRPS1-201ENST00000220888 DEXIO95424 95 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 PDE4DQ08499 809 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 UVSSAQ2YD98 709 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 ARHGEF16Q5VV41 709 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 CCDC129Q6ZRS4 1044 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 ANKRD35Q8N283 1001 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 LAMC3Q9Y6N6 1575 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 RAD50Q92878 1312 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 RALGAPBQ86X10 1494 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 B4E1Z4 1266 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 TAF5LO75529 589 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 CEP128Q6ZU80 1094 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 DPP9Q86TI2 863 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 ZBTB8OSQ8IWT0 167 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 LPIN2Q92539 896 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 LZTS2Q9BRK4 669 aa11.79□□□□□ -0.52
TRPS1-201ENST00000220888 VIMP08670 466 aaKnown RBP11.78□□□□□ -0.52
TRPS1-201ENST00000220888 UTP14CQ5TAP6 766 aaKnown RBP11.78□□□□□ -0.52
TRPS1-201ENST00000220888 PIK3AP1Q6ZUJ8 805 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 NLGN1Q8N2Q7 840 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 MRPL50Q8N5N7 158 aaKnown RBP11.78□□□□□ -0.52
TRPS1-201ENST00000220888 TGFBRAP1Q8WUH2 860 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 ABCA10Q8WWZ4 1543 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 NPATQ14207 1427 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 CTAGE9A4FU28 777 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 SMIM23A6NLE4 172 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 OPA1O60313 960 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 PRDM1O75626 825 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 TNNC1P63316 161 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 NONOQ15233 471 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRPS1-201ENST00000220888 ANO6Q4KMQ2 910 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 METTL22Q9BUU2 404 aaPredicted RBP11.78□□□□□ -0.52
TRPS1-201ENST00000220888 ZMYM3Q14202 1370 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 ATF7P17544 494 aaPredicted RBP11.78□□□□□ -0.52
TRPS1-201ENST00000220888 HSPA4P34932 840 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 CREB3L3Q68CJ9 461 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 KRT25Q7Z3Z0 450 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms