RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 CTAGE9A4FU28 777 aa21.27■■□□□ 1
SMPD3-201ENST00000219334 RPS6KB1P23443 525 aa21.27■■□□□ 1
SMPD3-201ENST00000219334 TYRO3Q06418 890 aa21.27■■□□□ 1
SMPD3-201ENST00000219334 TXKP42681 527 aa21.27■□□□□ 0.99
SMPD3-201ENST00000219334 RNF34Q969K3 372 aa21.27■□□□□ 0.99
SMPD3-201ENST00000219334 STMN4Q9H169 189 aaPredicted RBP21.27■□□□□ 0.99
SMPD3-201ENST00000219334 ELP1O95163 1332 aa21.27■□□□□ 0.99
SMPD3-201ENST00000219334 PDE4DQ08499 809 aa21.26■□□□□ 0.99
SMPD3-201ENST00000219334 SLC5A4Q9NY91 659 aa21.26■□□□□ 0.99
SMPD3-201ENST00000219334 IBTKQ9P2D0 1353 aaPredicted RBP21.26■□□□□ 0.99
SMPD3-201ENST00000219334 CHL1O00533 1208 aa21.26■□□□□ 0.99
SMPD3-201ENST00000219334 ATP2A2P16615 1042 aaKnown RBP21.26■□□□□ 0.99
SMPD3-201ENST00000219334 PPP2R5BQ15173 497 aa21.26■□□□□ 0.99
SMPD3-201ENST00000219334 CNNM4Q6P4Q7 775 aa21.26■□□□□ 0.99
SMPD3-201ENST00000219334 TGFBRAP1Q8WUH2 860 aa21.26■□□□□ 0.99
SMPD3-201ENST00000219334 SUCLG2Q96I99 432 aa21.26■□□□□ 0.99
SMPD3-201ENST00000219334 SPC25Q9HBM1 224 aa21.26■□□□□ 0.99
SMPD3-201ENST00000219334 NONOQ15233 471 aaKnown RBP eCLIP21.25■□□□□ 0.99
SMPD3-201ENST00000219334 NCAPH2Q6IBW4 605 aa21.25■□□□□ 0.99
SMPD3-201ENST00000219334 KRT25Q7Z3Z0 450 aa21.25■□□□□ 0.99
SMPD3-201ENST00000219334 KBTBD3Q8NAB2 608 aa21.25■□□□□ 0.99
SMPD3-201ENST00000219334 TEKT1Q969V4 418 aa21.25■□□□□ 0.99
SMPD3-201ENST00000219334 GAS8O95995 478 aa21.25■□□□□ 0.99
SMPD3-201ENST00000219334 GTF2IP78347 998 aa21.25■□□□□ 0.99
SMPD3-201ENST00000219334 AS3MTQ9HBK9 375 aa21.25■□□□□ 0.99
SMPD3-201ENST00000219334 ZBTB7BO15156 539 aaPredicted RBP21.25■□□□□ 0.99
SMPD3-201ENST00000219334 MSL1Q68DK7 614 aa21.25■□□□□ 0.99
SMPD3-201ENST00000219334 MTUS1Q9ULD2 1270 aa21.25■□□□□ 0.99
SMPD3-201ENST00000219334 SNX16P57768 344 aa21.25■□□□□ 0.99
SMPD3-201ENST00000219334 CFBP00751 764 aa21.25■□□□□ 0.99
SMPD3-201ENST00000219334 USP40Q9NVE5 1235 aa21.25■□□□□ 0.99
SMPD3-201ENST00000219334 LPXNO60711 386 aa21.24■□□□□ 0.99
SMPD3-201ENST00000219334 NOX5Q96PH1 765 aa21.24■□□□□ 0.99
SMPD3-201ENST00000219334 TTF2Q9UNY4 1162 aaKnown RBP21.24■□□□□ 0.99
SMPD3-201ENST00000219334 COL17A1Q9UMD9 1497 aaPredicted RBP21.24■□□□□ 0.99
SMPD3-201ENST00000219334 DDX39AO00148 427 aaKnown RBP21.24■□□□□ 0.99
SMPD3-201ENST00000219334 BMS1Q14692 1282 aaKnown RBP21.24■□□□□ 0.99
SMPD3-201ENST00000219334 USH1GQ495M9 461 aa21.24■□□□□ 0.99
SMPD3-201ENST00000219334 TUBB4AP04350 444 aa21.24■□□□□ 0.99
SMPD3-201ENST00000219334 RFX1P22670 979 aa21.24■□□□□ 0.99
SMPD3-201ENST00000219334 FBF1Q8TES7 1133 aa21.24■□□□□ 0.99
SMPD3-201ENST00000219334 USP19O94966 1318 aa21.24■□□□□ 0.99
SMPD3-201ENST00000219334 SLC27A2O14975 620 aa21.24■□□□□ 0.99
SMPD3-201ENST00000219334 CALUO43852 315 aaPredicted RBP21.24■□□□□ 0.99
SMPD3-201ENST00000219334 MFSD14BQ5SR56 506 aa21.24■□□□□ 0.99
SMPD3-201ENST00000219334 GUCA1BQ9UMX6 200 aa21.24■□□□□ 0.99
SMPD3-201ENST00000219334 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.24■□□□□ 0.99
SMPD3-201ENST00000219334 NOC4LQ9BVI4 516 aaKnown RBP21.23■□□□□ 0.99
SMPD3-201ENST00000219334 NSRP1Q9H0G5 558 aaKnown RBP21.23■□□□□ 0.99
SMPD3-201ENST00000219334 KIAA0556O60303 1618 aa21.23■□□□□ 0.99
SMPD3-201ENST00000219334 LEO1Q8WVC0 666 aaPredicted RBP21.23■□□□□ 0.99
SMPD3-201ENST00000219334 VWA3BQ502W6 1294 aa21.23■□□□□ 0.99
SMPD3-201ENST00000219334 CHURC1Q8WUH1 139 aa21.23■□□□□ 0.99
SMPD3-201ENST00000219334 KIFC2Q96AC6 838 aa21.22■□□□□ 0.99
SMPD3-201ENST00000219334 CETN3O15182 167 aa21.22■□□□□ 0.99
SMPD3-201ENST00000219334 FNBP4Q8N3X1 1017 aaPredicted RBP21.22■□□□□ 0.99
SMPD3-201ENST00000219334 CBX1P83916 185 aa21.22■□□□□ 0.99
SMPD3-201ENST00000219334 PPP1R7Q15435 360 aa21.22■□□□□ 0.99
SMPD3-201ENST00000219334 USP26Q9BXU7 913 aa21.22■□□□□ 0.99
SMPD3-201ENST00000219334 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.22■□□□□ 0.99
SMPD3-201ENST00000219334 LRWD1Q9UFC0 647 aa21.22■□□□□ 0.99
SMPD3-201ENST00000219334 SHANK2Q9UPX8 1470 aa21.22■□□□□ 0.99
SMPD3-201ENST00000219334 ZNF532Q9HCE3 1301 aa21.22■□□□□ 0.99
SMPD3-201ENST00000219334 C2CD5Q86YS7 1000 aa21.22■□□□□ 0.99
SMPD3-201ENST00000219334 CNGA4Q8IV77 575 aa21.22■□□□□ 0.99
SMPD3-201ENST00000219334 DIS3L2Q8IYB7 885 aaKnown RBP21.22■□□□□ 0.99
SMPD3-201ENST00000219334 LLPHQ9BRT6 129 aaKnown RBP21.22■□□□□ 0.99
SMPD3-201ENST00000219334 TNFAIP3P21580 790 aa21.22■□□□□ 0.99
SMPD3-201ENST00000219334 KIF22Q14807 665 aa21.22■□□□□ 0.99
SMPD3-201ENST00000219334 DNM3Q9UQ16 869 aa21.22■□□□□ 0.99
SMPD3-201ENST00000219334 MXRA7P84157 204 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 TTC38Q5R3I4 469 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 DCAF15Q66K64 600 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 ARHGAP27Q6ZUM4 889 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 A0A1B0GVL5 298 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 ZAP70P43403 619 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 TFAP4Q01664 338 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 CTDSPL2Q05D32 466 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 SEL1L2Q5TEA6 688 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 PODXL2Q9NZ53 605 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 MTRF1LQ9UGC7 380 aaKnown RBP21.21■□□□□ 0.99
SMPD3-201ENST00000219334 AOX1Q06278 1338 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 SNX29Q8TEQ0 813 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 CPA1P15085 419 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 MYL5Q02045 173 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 TBC1D8BQ0IIM8 1120 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 ZNF710Q8N1W2 664 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 CNKSR1Q969H4 720 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 JAKMIP2Q96AA8 810 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 IFNKQ9P0W0 207 aa21.21■□□□□ 0.99
SMPD3-201ENST00000219334 CALCOCO2Q13137 446 aa21.2■□□□□ 0.98
SMPD3-201ENST00000219334 ANO1Q5XXA6 986 aa21.2■□□□□ 0.98
SMPD3-201ENST00000219334 HACE1Q8IYU2 909 aa21.2■□□□□ 0.98
SMPD3-201ENST00000219334 ARFGAP3Q9NP61 516 aa21.2■□□□□ 0.98
SMPD3-201ENST00000219334 TMEM2Q9UHN6 1383 aa21.2■□□□□ 0.98
SMPD3-201ENST00000219334 PLEKHG3A1L390 1219 aa21.2■□□□□ 0.98
SMPD3-201ENST00000219334 ATP2B4P23634 1241 aa21.2■□□□□ 0.98
SMPD3-201ENST00000219334 TERF1P54274 439 aa21.2■□□□□ 0.98
SMPD3-201ENST00000219334 INF2Q27J81 1249 aa21.2■□□□□ 0.98
SMPD3-201ENST00000219334 MAEAQ7L5Y9 396 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms