RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 JAKMIP3Q5VZ66 844 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 ZSWIM4Q9H7M6 989 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 TRPC6Q9Y210 931 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 RIMS1Q86UR5 1692 aaKnown RBP15.63■□□□□ 0.09
SIX4-201ENST00000216513 H0YHG0 523 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 USP17L8P0C7I0 530 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 GRAPQ13588 217 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 GRAPLQ8TC17 118 aaPredicted RBP15.63■□□□□ 0.09
SIX4-201ENST00000216513 PDE4DQ08499 809 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 MAP7D2Q96T17 732 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 TSPYL1Q9H0U9 437 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 ATG3Q9NT62 314 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 TRIM35Q9UPQ4 493 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 CTNNA2P26232 953 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 KRT26Q7Z3Y9 468 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 TBC1D9BQ66K14 1250 aa15.62■□□□□ 0.09
SIX4-201ENST00000216513 CCDC117Q8IWD4 279 aaPredicted RBP15.62■□□□□ 0.09
SIX4-201ENST00000216513 CDC42BPGQ6DT37 1551 aa15.62■□□□□ 0.09
SIX4-201ENST00000216513 GDF11O95390 407 aa15.62■□□□□ 0.09
SIX4-201ENST00000216513 PDIA4P13667 645 aaKnown RBP15.62■□□□□ 0.09
SIX4-201ENST00000216513 DNM2P50570 870 aa15.62■□□□□ 0.09
SIX4-201ENST00000216513 ASIC1P78348 528 aa15.62■□□□□ 0.09
SIX4-201ENST00000216513 MAP3K11Q16584 847 aa15.62■□□□□ 0.09
SIX4-201ENST00000216513 UTP14CQ5TAP6 766 aaKnown RBP15.62■□□□□ 0.09
SIX4-201ENST00000216513 SUSD4Q5VX71 490 aa15.62■□□□□ 0.09
SIX4-201ENST00000216513 SDR42E1Q8WUS8 393 aa15.62■□□□□ 0.09
SIX4-201ENST00000216513 AP5M1Q9H0R1 490 aa15.62■□□□□ 0.09
SIX4-201ENST00000216513 CIZ1Q9ULV3 898 aaPredicted RBP15.62■□□□□ 0.09
SIX4-201ENST00000216513 Q3C1V9 767 aa15.62■□□□□ 0.09
SIX4-201ENST00000216513 GIMAP6Q6P9H5 292 aa15.62■□□□□ 0.09
SIX4-201ENST00000216513 GPIHBP1Q8IV16 184 aa15.62■□□□□ 0.09
SIX4-201ENST00000216513 ESYT1Q9BSJ8 1104 aa15.62■□□□□ 0.09
SIX4-201ENST00000216513 COMMD10Q9Y6G5 202 aa15.62■□□□□ 0.09
SIX4-201ENST00000216513 CBX1P83916 185 aa15.61■□□□□ 0.09
SIX4-201ENST00000216513 CCDC102BQ68D86 513 aa15.61■□□□□ 0.09
SIX4-201ENST00000216513 USP17L12C9JPN9 530 aa15.61■□□□□ 0.09
SIX4-201ENST00000216513 USP17L21D6R901 530 aa15.61■□□□□ 0.09
SIX4-201ENST00000216513 TAF4BQ92750 862 aa15.61■□□□□ 0.09
SIX4-201ENST00000216513 SCAND2PQ9GZW5 306 aaPredicted RBP15.61■□□□□ 0.09
SIX4-201ENST00000216513 RNF216Q9NWF9 866 aaPredicted RBP15.61■□□□□ 0.09
SIX4-201ENST00000216513 NARFQ9UHQ1 456 aa15.61■□□□□ 0.09
SIX4-201ENST00000216513 RLBP1P12271 317 aa15.6■□□□□ 0.09
SIX4-201ENST00000216513 CCDC112Q8NEF3 446 aa15.6■□□□□ 0.09
SIX4-201ENST00000216513 SRRTQ9BXP5 876 aaKnown RBP15.6■□□□□ 0.09
SIX4-201ENST00000216513 CLTCQ00610 1675 aaKnown RBP15.6■□□□□ 0.09
SIX4-201ENST00000216513 CRB1P82279 1406 aa15.6■□□□□ 0.09
SIX4-201ENST00000216513 SASH1O94885 1247 aa15.6■□□□□ 0.09
SIX4-201ENST00000216513 ERLIN2O94905 339 aa15.6■□□□□ 0.09
SIX4-201ENST00000216513 BMS1Q14692 1282 aaKnown RBP15.6■□□□□ 0.09
SIX4-201ENST00000216513 C16orf45Q96MC5 204 aaPredicted RBP15.6■□□□□ 0.09
SIX4-201ENST00000216513 ERBB4Q15303 1308 aa15.6■□□□□ 0.09
SIX4-201ENST00000216513 CYP27B1O15528 508 aa15.6■□□□□ 0.09
SIX4-201ENST00000216513 IGBP1P78318 339 aa15.6■□□□□ 0.09
SIX4-201ENST00000216513 SEPT7Q16181 437 aaKnown RBP15.6■□□□□ 0.09
SIX4-201ENST00000216513 NCAPH2Q6IBW4 605 aa15.6■□□□□ 0.09
SIX4-201ENST00000216513 MRVI1Q9Y6F6 885 aa15.6■□□□□ 0.09
SIX4-201ENST00000216513 ZHX1Q9UKY1 873 aaPredicted RBP15.6■□□□□ 0.09
SIX4-201ENST00000216513 CNPY2Q9Y2B0 182 aa15.6■□□□□ 0.09
SIX4-201ENST00000216513 ATP7BP35670 1465 aa15.6■□□□□ 0.09
SIX4-201ENST00000216513 HEG1Q9ULI3 1381 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 MARCKSP29966 332 aaPredicted RBP15.59■□□□□ 0.09
SIX4-201ENST00000216513 ZMYND15Q9H091 742 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 BMP2KLQ5H9B9 411 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 CREB3L3Q68CJ9 461 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 CCDC102AQ96A19 550 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 ARPP21Q9UBL0 812 aaPredicted RBP15.59■□□□□ 0.09
SIX4-201ENST00000216513 KDRP35968 1356 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 EPB41L2O43491 1005 aaKnown RBP15.59■□□□□ 0.09
SIX4-201ENST00000216513 ECE2O60344 883 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 CCNT1O60563 726 aaKnown RBP15.59■□□□□ 0.09
SIX4-201ENST00000216513 NLRP10Q86W26 655 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 IFT74Q96LB3 600 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 PUS3Q9BZE2 481 aaKnown RBP15.59■□□□□ 0.09
SIX4-201ENST00000216513 CCDC113Q9H0I3 377 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 SEC24BO95487 1268 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 NLRX1Q86UT6 975 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 SPA17Q15506 151 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 GNPTABQ3T906 1256 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 TRIM47Q96LD4 638 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 PYM1Q9BRP8 204 aaKnown RBP15.59■□□□□ 0.09
SIX4-201ENST00000216513 COL15A1P39059 1388 aa15.59■□□□□ 0.09
SIX4-201ENST00000216513 PPARDQ03181 441 aa15.58■□□□□ 0.09
SIX4-201ENST00000216513 V9GY48 417 aaPredicted RBP15.58■□□□□ 0.09
SIX4-201ENST00000216513 PROCA1Q8NCQ7 364 aaPredicted RBP15.58■□□□□ 0.09
SIX4-201ENST00000216513 TMEM106CQ9BVX2 250 aa15.58■□□□□ 0.09
SIX4-201ENST00000216513 ADRA2BP18089 450 aa15.58■□□□□ 0.08
SIX4-201ENST00000216513 UBE4AQ14139 1066 aa15.58■□□□□ 0.08
SIX4-201ENST00000216513 CAPN15O75808 1086 aa15.58■□□□□ 0.08
SIX4-201ENST00000216513 NACA2Q9H009 215 aa15.58■□□□□ 0.08
SIX4-201ENST00000216513 CCPG1Q9ULG6 757 aa15.58■□□□□ 0.08
SIX4-201ENST00000216513 PNMA6EA0A0J9YXQ4 647 aa15.58■□□□□ 0.08
SIX4-201ENST00000216513 KIF4AO95239 1232 aa15.58■□□□□ 0.08
SIX4-201ENST00000216513 ADCY7P51828 1080 aa15.58■□□□□ 0.08
SIX4-201ENST00000216513 MYL10Q9BUA6 226 aa15.58■□□□□ 0.08
SIX4-201ENST00000216513 KDM5AP29375 1690 aaKnown RBP15.58■□□□□ 0.08
SIX4-201ENST00000216513 TMEM232C9JQI7 657 aa15.57■□□□□ 0.08
SIX4-201ENST00000216513 STRN3Q13033 797 aa15.57■□□□□ 0.08
SIX4-201ENST00000216513 RGS22Q8NE09 1264 aa15.57■□□□□ 0.08
SIX4-201ENST00000216513 SETD1BQ9UPS6 1966 aaKnown RBP15.57■□□□□ 0.08
SIX4-201ENST00000216513 CCT6AP40227 531 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms