RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 CTAGE4Q8IX94 777 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 SIRT1Q96EB6 747 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 SUGCTQ9HAC7 445 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 INCENPQ9NQS7 918 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 MROH7-TTC4A0A0A0MT08 1334 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 ILDR1Q86SU0 546 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-201ENST00000193403 KRI1Q8N9T8 703 aaKnown RBP12.76□□□□□ -0.37
ACTN1-201ENST00000193403 L2HGDHQ9H9P8 463 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 POLR3EQ9NVU0 708 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 DENND2AQ9ULE3 1009 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 AGLP35573 1532 aa12.76□□□□□ -0.37
ACTN1-201ENST00000193403 CTAGE9A4FU28 777 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 BTBD18B2RXH4 712 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 A1BGP04217 495 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 ZMYM1Q5SVZ6 1142 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 TTLL7Q6ZT98 887 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 RGS22Q8NE09 1264 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 DRC1Q96MC2 740 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 VPS16Q9H269 839 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 ADAM21Q9UKJ8 722 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 FAN1Q9Y2M0 1017 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 UBE2Q2LH0YL09 131 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 TFRCP02786 760 aaKnown RBP12.75□□□□□ -0.37
ACTN1-201ENST00000193403 NAP1L1P55209 391 aaKnown RBP12.75□□□□□ -0.37
ACTN1-201ENST00000193403 POSTNQ15063 836 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-201ENST00000193403 GPATCH11Q8N954 259 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 EYA2O00167 538 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 TUBB4AP04350 444 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 COL15A1P39059 1388 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 SLC39A14Q15043 492 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 DIS3L2Q8IYB7 885 aaKnown RBP12.75□□□□□ -0.37
ACTN1-201ENST00000193403 SMARCC1Q92922 1105 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-201ENST00000193403 CRACR2AQ9BSW2 395 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 PARP3Q9Y6F1 533 aa12.75□□□□□ -0.37
ACTN1-201ENST00000193403 ZMYND10O75800 440 aa12.74□□□□□ -0.37
ACTN1-201ENST00000193403 SART3Q15020 963 aaKnown RBP12.74□□□□□ -0.37
ACTN1-201ENST00000193403 USPL1Q5W0Q7 1092 aa12.74□□□□□ -0.37
ACTN1-201ENST00000193403 LDHAL6AQ6ZMR3 332 aa12.74□□□□□ -0.37
ACTN1-201ENST00000193403 KIAA1328Q86T90 577 aa12.74□□□□□ -0.37
ACTN1-201ENST00000193403 EEF2KMTQ96G04 330 aa12.74□□□□□ -0.37
ACTN1-201ENST00000193403 FAM89AQ96GI7 184 aa12.74□□□□□ -0.37
ACTN1-201ENST00000193403 XAGE2Q96GT9 111 aa12.74□□□□□ -0.37
ACTN1-201ENST00000193403 CDC5LQ99459 802 aaKnown RBP12.74□□□□□ -0.37
ACTN1-201ENST00000193403 CABP5Q9NP86 173 aa12.74□□□□□ -0.37
ACTN1-201ENST00000193403 ANGEL1Q9UNK9 670 aaKnown RBP12.74□□□□□ -0.37
ACTN1-201ENST00000193403 MYO1CO00159 1063 aa12.74□□□□□ -0.37
ACTN1-201ENST00000193403 SASH3O75995 380 aa12.74□□□□□ -0.37
ACTN1-201ENST00000193403 TSGA10IPQ3SY00 556 aa12.74□□□□□ -0.37
ACTN1-201ENST00000193403 SLF1Q9BQI6 1058 aa12.74□□□□□ -0.37
ACTN1-201ENST00000193403 PUS7LQ9H0K6 701 aaKnown RBP12.74□□□□□ -0.37
ACTN1-201ENST00000193403 IFIT5Q13325 482 aaKnown RBP12.74□□□□□ -0.37
ACTN1-201ENST00000193403 ACRBPQ8NEB7 543 aa12.74□□□□□ -0.37
ACTN1-201ENST00000193403 VWA3AA6NCI4 1184 aa12.73□□□□□ -0.37
ACTN1-201ENST00000193403 H0YHG0 523 aa12.73□□□□□ -0.37
ACTN1-201ENST00000193403 GTF2A1P52655 376 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-201ENST00000193403 SHC4Q6S5L8 630 aa12.73□□□□□ -0.37
ACTN1-201ENST00000193403 HDXQ7Z353 690 aa12.73□□□□□ -0.37
ACTN1-201ENST00000193403 RUFY1Q96T51 708 aa12.73□□□□□ -0.37
ACTN1-201ENST00000193403 CTDSPL2Q05D32 466 aa12.73□□□□□ -0.37
ACTN1-201ENST00000193403 PDE4BQ07343 736 aa12.73□□□□□ -0.37
ACTN1-201ENST00000193403 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
ACTN1-201ENST00000193403 RRP15Q9Y3B9 282 aaKnown RBP12.73□□□□□ -0.37
ACTN1-201ENST00000193403 IKBKBO14920 756 aa12.73□□□□□ -0.37
ACTN1-201ENST00000193403 TBC1D8O95759 1140 aa12.73□□□□□ -0.37
ACTN1-201ENST00000193403 TXLNAP40222 546 aa12.73□□□□□ -0.37
ACTN1-201ENST00000193403 CTR9Q6PD62 1173 aa12.73□□□□□ -0.37
ACTN1-201ENST00000193403 UBAC1Q9BSL1 405 aa12.73□□□□□ -0.37
ACTN1-201ENST00000193403 MARCH6O60337 910 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 CLSTN1O94985 981 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 PRR29P0C7W0 189 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 EXOSC10Q01780 885 aaKnown RBP12.72□□□□□ -0.37
ACTN1-201ENST00000193403 NCAPHQ15003 741 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 RRAGBQ5VZM2 374 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 KIF6Q6ZMV9 814 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 IFNL2Q8IZJ0 200 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 SLC35F6Q8N357 371 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 CEP112Q8N8E3 955 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 SLC52A2Q9HAB3 445 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 LMTK3Q96Q04 1460 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 ENC1O14682 589 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 RABGGTAQ92696 567 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 ALDH8A1Q9H2A2 487 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-201ENST00000193403 LRP2BPQ9P2M1 347 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 FEZ2Q9UHY8 353 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-201ENST00000193403 PXDNLA1KZ92 1463 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 NR5A1Q13285 461 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 REXO1L1PQ8IX06 675 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 MICALL1Q8N3F8 863 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 BLZF1Q9H2G9 400 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 ABCB6Q9NP58 842 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 TAB2Q9NYJ8 693 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 CTNND2Q9UQB3 1225 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 AKAP2Q9Y2D5 859 aa12.72□□□□□ -0.37
ACTN1-201ENST00000193403 TEX33O43247 280 aa12.71□□□□□ -0.37
ACTN1-201ENST00000193403 N4BP1O75113 896 aaKnown RBP12.71□□□□□ -0.37
ACTN1-201ENST00000193403 EIF5P55010 431 aaKnown RBP12.71□□□□□ -0.37
ACTN1-201ENST00000193403 CCDC70Q6NSX1 233 aa12.71□□□□□ -0.37
ACTN1-201ENST00000193403 CCDC148Q8NFR7 591 aa12.71□□□□□ -0.37
ACTN1-201ENST00000193403 GBP3Q9H0R5 595 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms