RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 PCP11498 1178 aaKnown RBP18.35■□□□□ 0.53
LAPTM4A-201ENST00000175091 HMGN5P82970 282 aaKnown RBP18.35■□□□□ 0.53
LAPTM4A-201ENST00000175091 CERS3Q8IU89 383 aa18.35■□□□□ 0.53
LAPTM4A-201ENST00000175091 EYA3Q99504 573 aa18.35■□□□□ 0.53
LAPTM4A-201ENST00000175091 LMBRD1Q9NUN5 540 aa18.35■□□□□ 0.53
LAPTM4A-201ENST00000175091 NAP1L2Q9ULW6 460 aaPredicted RBP18.35■□□□□ 0.53
LAPTM4A-201ENST00000175091 GAKO14976 1311 aa18.34■□□□□ 0.53
LAPTM4A-201ENST00000175091 SMIM22K7EJ46 135 aa18.34■□□□□ 0.53
LAPTM4A-201ENST00000175091 FGRP09769 529 aa18.34■□□□□ 0.53
LAPTM4A-201ENST00000175091 LIFRP42702 1097 aa18.34■□□□□ 0.53
LAPTM4A-201ENST00000175091 SKOR2Q2VWA4 1001 aaPredicted RBP18.34■□□□□ 0.53
LAPTM4A-201ENST00000175091 CDC37L1Q7L3B6 337 aa18.34■□□□□ 0.53
LAPTM4A-201ENST00000175091 CCDC125Q86Z20 511 aa18.34■□□□□ 0.53
LAPTM4A-201ENST00000175091 MKRN1Q9UHC7 482 aaKnown RBP18.34■□□□□ 0.53
LAPTM4A-201ENST00000175091 NID2Q14112 1375 aa18.34■□□□□ 0.53
LAPTM4A-201ENST00000175091 PSME4Q14997 1843 aa18.33■□□□□ 0.53
LAPTM4A-201ENST00000175091 CYP2D7A0A087X1C5 515 aa18.33■□□□□ 0.53
LAPTM4A-201ENST00000175091 USP17L12C9JPN9 530 aa18.33■□□□□ 0.53
LAPTM4A-201ENST00000175091 USP17L21D6R901 530 aa18.33■□□□□ 0.53
LAPTM4A-201ENST00000175091 BAG3O95817 575 aa18.33■□□□□ 0.53
LAPTM4A-201ENST00000175091 GTF2IP78347 998 aa18.33■□□□□ 0.53
LAPTM4A-201ENST00000175091 SBK1Q52WX2 424 aa18.33■□□□□ 0.53
LAPTM4A-201ENST00000175091 APOA5Q6Q788 366 aa18.33■□□□□ 0.53
LAPTM4A-201ENST00000175091 C7orf43Q8WVR3 580 aa18.33■□□□□ 0.53
LAPTM4A-201ENST00000175091 SUGT1Q9Y2Z0 365 aa18.33■□□□□ 0.53
LAPTM4A-201ENST00000175091 ROBO3Q96MS0 1386 aa18.33■□□□□ 0.52
LAPTM4A-201ENST00000175091 GSE1Q14687 1217 aa18.32■□□□□ 0.52
LAPTM4A-201ENST00000175091 TMEM67Q5HYA8 995 aa18.32■□□□□ 0.52
LAPTM4A-201ENST00000175091 RRP12Q5JTH9 1297 aaKnown RBP18.32■□□□□ 0.52
LAPTM4A-201ENST00000175091 SH3RF3Q8TEJ3 882 aaPredicted RBP18.32■□□□□ 0.52
LAPTM4A-201ENST00000175091 FAM163AQ96GL9 167 aaPredicted RBP18.32■□□□□ 0.52
LAPTM4A-201ENST00000175091 SENP2Q9HC62 589 aa18.32■□□□□ 0.52
LAPTM4A-201ENST00000175091 TOMM22Q9NS69 142 aa18.32■□□□□ 0.52
LAPTM4A-201ENST00000175091 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.32■□□□□ 0.52
LAPTM4A-201ENST00000175091 ATP6V1DQ9Y5K8 247 aa18.32■□□□□ 0.52
LAPTM4A-201ENST00000175091 GPR75-ASB3A0A0A6YYF3 556 aa18.32■□□□□ 0.52
LAPTM4A-201ENST00000175091 MYH1P12882 1939 aa18.32■□□□□ 0.52
LAPTM4A-201ENST00000175091 ESR2Q92731 530 aa18.32■□□□□ 0.52
LAPTM4A-201ENST00000175091 DDX11Q96FC9 970 aa18.32■□□□□ 0.52
LAPTM4A-201ENST00000175091 NOL10Q9BSC4 688 aaKnown RBP18.32■□□□□ 0.52
LAPTM4A-201ENST00000175091 KIF3AQ9Y496 699 aa18.32■□□□□ 0.52
LAPTM4A-201ENST00000175091 IFIT3O14879 490 aaKnown RBP18.31■□□□□ 0.52
LAPTM4A-201ENST00000175091 DHX16O60231 1041 aaKnown RBP18.31■□□□□ 0.52
LAPTM4A-201ENST00000175091 BTDP43251 543 aa18.31■□□□□ 0.52
LAPTM4A-201ENST00000175091 SART3Q15020 963 aaKnown RBP18.31■□□□□ 0.52
LAPTM4A-201ENST00000175091 KLHL40Q2TBA0 621 aa18.31■□□□□ 0.52
LAPTM4A-201ENST00000175091 SLF2Q8IX21 1173 aa18.31■□□□□ 0.52
LAPTM4A-201ENST00000175091 FAM184AQ8NB25 1140 aa18.31■□□□□ 0.52
LAPTM4A-201ENST00000175091 EVX2Q03828 476 aa18.3■□□□□ 0.52
LAPTM4A-201ENST00000175091 DOK7Q18PE1 504 aa18.3■□□□□ 0.52
LAPTM4A-201ENST00000175091 STK11IPQ8N1F8 1099 aa18.3■□□□□ 0.52
LAPTM4A-201ENST00000175091 CERS5Q8N5B7 392 aa18.3■□□□□ 0.52
LAPTM4A-201ENST00000175091 BRCA1P38398 1863 aaKnown RBP18.3■□□□□ 0.52
LAPTM4A-201ENST00000175091 ORC4O43929 436 aa18.3■□□□□ 0.52
LAPTM4A-201ENST00000175091 USP5P45974 858 aa18.3■□□□□ 0.52
LAPTM4A-201ENST00000175091 METAP2P50579 478 aaKnown RBP eCLIP18.3■□□□□ 0.52
LAPTM4A-201ENST00000175091 CC2D2BQ6DHV5 1058 aa18.3■□□□□ 0.52
LAPTM4A-201ENST00000175091 PODNQ7Z5L7 613 aa18.3■□□□□ 0.52
LAPTM4A-201ENST00000175091 TMEM87AQ8NBN3 555 aa18.3■□□□□ 0.52
LAPTM4A-201ENST00000175091 ZBTB43O43298 467 aa18.29■□□□□ 0.52
LAPTM4A-201ENST00000175091 PRPF40AO75400 957 aaKnown RBP18.29■□□□□ 0.52
LAPTM4A-201ENST00000175091 FDPSP14324 419 aaKnown RBP18.29■□□□□ 0.52
LAPTM4A-201ENST00000175091 FOXD4L6Q3SYB3 417 aaPredicted RBP18.29■□□□□ 0.52
LAPTM4A-201ENST00000175091 FOXD4L3Q6VB84 417 aaPredicted RBP18.29■□□□□ 0.52
LAPTM4A-201ENST00000175091 MICU3Q86XE3 530 aa18.29■□□□□ 0.52
LAPTM4A-201ENST00000175091 RAB11FIP4Q86YS3 637 aa18.29■□□□□ 0.52
LAPTM4A-201ENST00000175091 MCM9Q9NXL9 1143 aa18.29■□□□□ 0.52
LAPTM4A-201ENST00000175091 TNKSO95271 1327 aa18.28■□□□□ 0.52
LAPTM4A-201ENST00000175091 USP17L8P0C7I0 530 aa18.28■□□□□ 0.52
LAPTM4A-201ENST00000175091 CYP2D6P10635 497 aa18.28■□□□□ 0.52
LAPTM4A-201ENST00000175091 PLCG2P16885 1265 aa18.28■□□□□ 0.52
LAPTM4A-201ENST00000175091 RHBDL3P58872 404 aa18.28■□□□□ 0.52
LAPTM4A-201ENST00000175091 WTAPQ15007 396 aa18.28■□□□□ 0.52
LAPTM4A-201ENST00000175091 SEC23AQ15436 765 aa18.28■□□□□ 0.52
LAPTM4A-201ENST00000175091 C12orf60Q5U649 245 aa18.28■□□□□ 0.52
LAPTM4A-201ENST00000175091 NFXL1Q6ZNB6 911 aa18.28■□□□□ 0.52
LAPTM4A-201ENST00000175091 ZKSCAN3Q9BRR0 538 aa18.28■□□□□ 0.52
LAPTM4A-201ENST00000175091 UBAC1Q9BSL1 405 aa18.28■□□□□ 0.52
LAPTM4A-201ENST00000175091 DAGLAQ9Y4D2 1042 aa18.28■□□□□ 0.52
LAPTM4A-201ENST00000175091 DDX49Q9Y6V7 483 aaKnown RBP18.28■□□□□ 0.52
LAPTM4A-201ENST00000175091 ERICH2A1L162 156 aa18.27■□□□□ 0.52
LAPTM4A-201ENST00000175091 CCDC69A6NI79 296 aa18.27■□□□□ 0.52
LAPTM4A-201ENST00000175091 SLC3A2P08195 630 aaKnown RBP18.27■□□□□ 0.52
LAPTM4A-201ENST00000175091 RCAN1P53805 252 aa18.27■□□□□ 0.52
LAPTM4A-201ENST00000175091 DBNDD1Q9H9R9 158 aa18.27■□□□□ 0.52
LAPTM4A-201ENST00000175091 SLC12A7Q9Y666 1083 aa18.27■□□□□ 0.52
LAPTM4A-201ENST00000175091 CPLX1O14810 134 aa18.27■□□□□ 0.51
LAPTM4A-201ENST00000175091 PRDM1O75626 825 aa18.27■□□□□ 0.51
LAPTM4A-201ENST00000175091 NT5C2P49902 561 aa18.27■□□□□ 0.51
LAPTM4A-201ENST00000175091 FERMT3Q86UX7 667 aa18.27■□□□□ 0.51
LAPTM4A-201ENST00000175091 TGFBRAP1Q8WUH2 860 aa18.27■□□□□ 0.51
LAPTM4A-201ENST00000175091 FBXW7Q969H0 707 aa18.27■□□□□ 0.51
LAPTM4A-201ENST00000175091 ZNF219Q9P2Y4 722 aaPredicted RBP18.27■□□□□ 0.51
LAPTM4A-201ENST00000175091 CNPY2Q9Y2B0 182 aa18.27■□□□□ 0.51
LAPTM4A-201ENST00000175091 FLT1P17948 1338 aa18.26■□□□□ 0.51
LAPTM4A-201ENST00000175091 GOLGA8AA7E2F4 631 aa18.26■□□□□ 0.51
LAPTM4A-201ENST00000175091 G3V3G9 751 aa18.26■□□□□ 0.51
LAPTM4A-201ENST00000175091 RXRAP19793 462 aa18.26■□□□□ 0.51
LAPTM4A-201ENST00000175091 CDC27P30260 824 aa18.26■□□□□ 0.51
LAPTM4A-201ENST00000175091 PDE4BQ07343 736 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms