RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 TRMT1Q9NXH9 659 aaKnown RBP12.53□□□□□ -0.4
RGPD5-201ENST00000016946 PPEF1O14829 653 aaPredicted RBP12.53□□□□□ -0.4
RGPD5-201ENST00000016946 BBOX1O75936 387 aa12.53□□□□□ -0.4
RGPD5-201ENST00000016946 CFBP00751 764 aa12.53□□□□□ -0.4
RGPD5-201ENST00000016946 CYLC1P35663 651 aaPredicted RBP12.53□□□□□ -0.4
RGPD5-201ENST00000016946 HOMER2Q9NSB8 354 aa12.53□□□□□ -0.4
RGPD5-201ENST00000016946 CCDC65Q8IXS2 484 aa12.53□□□□□ -0.4
RGPD5-201ENST00000016946 SNX14Q9Y5W7 946 aa12.53□□□□□ -0.4
RGPD5-201ENST00000016946 AZI2Q9H6S1 392 aa12.53□□□□□ -0.4
RGPD5-201ENST00000016946 LEMD3Q9Y2U8 911 aa12.53□□□□□ -0.4
RGPD5-201ENST00000016946 PDE8BO95263 885 aa12.53□□□□□ -0.4
RGPD5-201ENST00000016946 SMTNP53814 917 aa12.53□□□□□ -0.4
RGPD5-201ENST00000016946 KCNQ4P56696 695 aa12.53□□□□□ -0.4
RGPD5-201ENST00000016946 LRRC24Q50LG9 513 aa12.53□□□□□ -0.4
RGPD5-201ENST00000016946 PDE6AP16499 860 aa12.53□□□□□ -0.4
RGPD5-201ENST00000016946 LLPHQ9BRT6 129 aaKnown RBP12.53□□□□□ -0.4
RGPD5-201ENST00000016946 KAT6BQ8WYB5 2073 aa12.52□□□□□ -0.4
RGPD5-201ENST00000016946 TCP10L2B9ZVM9 353 aa12.52□□□□□ -0.4
RGPD5-201ENST00000016946 ANO6Q4KMQ2 910 aa12.52□□□□□ -0.4
RGPD5-201ENST00000016946 MYL10Q9BUA6 226 aa12.52□□□□□ -0.4
RGPD5-201ENST00000016946 COPRSQ9NQ92 184 aa12.52□□□□□ -0.4
RGPD5-201ENST00000016946 PROSER3Q2NL68 480 aa12.52□□□□□ -0.4
RGPD5-201ENST00000016946 FAM47AQ5JRC9 791 aa12.52□□□□□ -0.41
RGPD5-201ENST00000016946 NCOA5Q9HCD5 579 aaKnown RBP12.52□□□□□ -0.41
RGPD5-201ENST00000016946 BTDP43251 543 aa12.52□□□□□ -0.41
RGPD5-201ENST00000016946 PIGBQ92521 554 aa12.52□□□□□ -0.41
RGPD5-201ENST00000016946 SLC5A4Q9NY91 659 aa12.52□□□□□ -0.41
RGPD5-201ENST00000016946 MCM3P25205 808 aa12.52□□□□□ -0.41
RGPD5-201ENST00000016946 TXKP42681 527 aa12.52□□□□□ -0.41
RGPD5-201ENST00000016946 TAF12Q16514 161 aa12.52□□□□□ -0.41
RGPD5-201ENST00000016946 GINS2Q9Y248 185 aa12.52□□□□□ -0.41
RGPD5-201ENST00000016946 AFF2P51816 1311 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 ZSCAN23Q3MJ62 389 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 MAP9Q49MG5 647 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 TTC37Q6PGP7 1564 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 DNAJC25Q9H1X3 360 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 MYO5CQ9NQX4 1742 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 PABPC4Q13310 644 aaKnown RBP eCLIP12.51□□□□□ -0.41
RGPD5-201ENST00000016946 USH1GQ495M9 461 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 AOPEPQ8N6M6 819 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 EDC3Q96F86 508 aaKnown RBP12.51□□□□□ -0.41
RGPD5-201ENST00000016946 HECW2Q9P2P5 1572 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 LRSAM1Q6UWE0 723 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 PRDM15P57071 1507 aaPredicted RBP12.51□□□□□ -0.41
RGPD5-201ENST00000016946 SEMA3EO15041 775 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 STX17P56962 302 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 TMCO3Q6UWJ1 677 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 IFT74Q96LB3 600 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 LRWD1Q9UFC0 647 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 ARHGAP31Q2M1Z3 1444 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 DPH6Q7L8W6 267 aa12.51□□□□□ -0.41
RGPD5-201ENST00000016946 ERVV-1B6SEH8 477 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 ARID4AP29374 1257 aaPredicted RBP12.5□□□□□ -0.41
RGPD5-201ENST00000016946 IFFO1Q0D2I5 559 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 CC2D2BQ6DHV5 1058 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 MSANTD4Q8NCY6 345 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 CCDC113Q9H0I3 377 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 PALLDQ8WX93 1383 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 ARHGEF35A5YM69 484 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 HARSP12081 509 aaKnown RBP12.5□□□□□ -0.41
RGPD5-201ENST00000016946 TTC16Q8NEE8 873 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 PAGR1Q9BTK6 254 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 JADE2Q9NQC1 790 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 CCDC169A6NNP5 214 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 PPP1R2P41236 205 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 FNBP4Q8N3X1 1017 aaPredicted RBP12.5□□□□□ -0.41
RGPD5-201ENST00000016946 ATF5Q9Y2D1 282 aaPredicted RBP12.5□□□□□ -0.41
RGPD5-201ENST00000016946 CCNT1O60563 726 aaKnown RBP12.5□□□□□ -0.41
RGPD5-201ENST00000016946 TTC38Q5R3I4 469 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 VSIG10Q8N0Z9 540 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 KDM5CP41229 1560 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 BIRC3Q13489 604 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 IFNL3Q8IZI9 196 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 KIFC2Q96AC6 838 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 HLTFQ14527 1009 aaKnown RBP eCLIP12.5□□□□□ -0.41
RGPD5-201ENST00000016946 FNBP1Q96RU3 617 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 PLEKHF1Q96S99 279 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 COMMD10Q9Y6G5 202 aa12.5□□□□□ -0.41
RGPD5-201ENST00000016946 KIF22Q14807 665 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 ANO1Q5XXA6 986 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 NCAPH2Q6IBW4 605 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 GOLGA6L7A0A1B0GV03 622 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 ICA1Q05084 483 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 KRT40Q6A162 431 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 REXO1Q8N1G1 1221 aaKnown RBP12.49□□□□□ -0.41
RGPD5-201ENST00000016946 GOLGA6L10A0A0M3HER8 536 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 E7EWF7 191 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 GNG11P61952 73 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 CERKLQ49MI3 558 aaPredicted RBP12.49□□□□□ -0.41
RGPD5-201ENST00000016946 CCDC93Q567U6 631 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 ZNF354CQ86Y25 554 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 ERFEQ4G0M1 354 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 OTUD7BQ6GQQ9 843 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 C16orf45Q96MC5 204 aaPredicted RBP12.49□□□□□ -0.41
RGPD5-201ENST00000016946 TMX1Q9H3N1 280 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 GPR108Q9NPR9 543 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 ADGRL3Q9HAR2 1447 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 ELP1O95163 1332 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 ZMYM4Q5VZL5 1548 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms