RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 HMG20BQ9P0W2 317 aa19.62■□□□□ 0.73
ERCC1-201ENST00000013807 ABCF2Q9UG63 623 aa19.62■□□□□ 0.73
ERCC1-201ENST00000013807 MROH7-TTC4A0A0A0MT08 1334 aa19.61■□□□□ 0.73
ERCC1-201ENST00000013807 ADGRA2Q96PE1 1338 aa19.61■□□□□ 0.73
ERCC1-201ENST00000013807 POLA2Q14181 598 aa19.61■□□□□ 0.73
ERCC1-201ENST00000013807 ERICH6Q7L0X2 663 aa19.61■□□□□ 0.73
ERCC1-201ENST00000013807 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.61■□□□□ 0.73
ERCC1-201ENST00000013807 GPR108Q9NPR9 543 aa19.61■□□□□ 0.73
ERCC1-201ENST00000013807 MYO5AQ9Y4I1 1855 aaKnown RBP19.6■□□□□ 0.73
ERCC1-201ENST00000013807 POTEFA5A3E0 1075 aa19.6■□□□□ 0.73
ERCC1-201ENST00000013807 PRMT2P55345 433 aa19.6■□□□□ 0.73
ERCC1-201ENST00000013807 RHBDL3P58872 404 aa19.6■□□□□ 0.73
ERCC1-201ENST00000013807 MECOMQ03112 1051 aa19.6■□□□□ 0.73
ERCC1-201ENST00000013807 G3BP1Q13283 466 aaKnown RBP eCLIP19.6■□□□□ 0.73
ERCC1-201ENST00000013807 TMEM57Q8N5G2 664 aa19.6■□□□□ 0.73
ERCC1-201ENST00000013807 SPATA5Q8NB90 893 aa19.6■□□□□ 0.73
ERCC1-201ENST00000013807 SSH3Q8TE77 659 aa19.6■□□□□ 0.73
ERCC1-201ENST00000013807 CLUAP1Q96AJ1 413 aa19.6■□□□□ 0.73
ERCC1-201ENST00000013807 ZNF333Q96JL9 665 aa19.6■□□□□ 0.73
ERCC1-201ENST00000013807 NEUROD6Q96NK8 337 aa19.6■□□□□ 0.73
ERCC1-201ENST00000013807 CDK5RAP2Q96SN8 1893 aa19.6■□□□□ 0.73
ERCC1-201ENST00000013807 COL2A1P02458 1487 aaPredicted RBP19.6■□□□□ 0.73
ERCC1-201ENST00000013807 TBC1D12O60347 775 aa19.59■□□□□ 0.73
ERCC1-201ENST00000013807 IGSF3O75054 1194 aa19.59■□□□□ 0.73
ERCC1-201ENST00000013807 BTDP43251 543 aa19.59■□□□□ 0.73
ERCC1-201ENST00000013807 NBPF11Q86T75 865 aa19.59■□□□□ 0.73
ERCC1-201ENST00000013807 SCYL3Q8IZE3 742 aa19.59■□□□□ 0.73
ERCC1-201ENST00000013807 NSUN4Q96CB9 384 aaKnown RBP19.59■□□□□ 0.73
ERCC1-201ENST00000013807 DDX4Q9NQI0 724 aaKnown RBP19.59■□□□□ 0.73
ERCC1-201ENST00000013807 FOCADQ5VW36 1801 aa19.59■□□□□ 0.73
ERCC1-201ENST00000013807 DDTLA6NHG4 134 aaPredicted RBP19.58■□□□□ 0.72
ERCC1-201ENST00000013807 PDHXO00330 501 aa19.58■□□□□ 0.72
ERCC1-201ENST00000013807 CTNND1O60716 968 aaKnown RBP19.58■□□□□ 0.72
ERCC1-201ENST00000013807 LDHCP07864 332 aa19.58■□□□□ 0.72
ERCC1-201ENST00000013807 ATP8B2P98198 1209 aa19.58■□□□□ 0.72
ERCC1-201ENST00000013807 KIF22Q14807 665 aa19.58■□□□□ 0.72
ERCC1-201ENST00000013807 AFG3L2Q9Y4W6 797 aa19.58■□□□□ 0.72
ERCC1-201ENST00000013807 PTCH2Q9Y6C5 1203 aa19.58■□□□□ 0.72
ERCC1-201ENST00000013807 ATAD5Q96QE3 1844 aa19.58■□□□□ 0.72
ERCC1-201ENST00000013807 UQCRFS1P1P0C7P4 283 aa19.57■□□□□ 0.72
ERCC1-201ENST00000013807 PTPRAP18433 802 aa19.57■□□□□ 0.72
ERCC1-201ENST00000013807 MCAMP43121 646 aa19.57■□□□□ 0.72
ERCC1-201ENST00000013807 GSTO1P78417 241 aa19.57■□□□□ 0.72
ERCC1-201ENST00000013807 GPAT2Q6NUI2 795 aa19.57■□□□□ 0.72
ERCC1-201ENST00000013807 SLC45A1Q9Y2W3 748 aa19.57■□□□□ 0.72
ERCC1-201ENST00000013807 DOCK3Q8IZD9 2030 aa19.57■□□□□ 0.72
ERCC1-201ENST00000013807 A0A0G2JLL6 359 aaPredicted RBP19.56■□□□□ 0.72
ERCC1-201ENST00000013807 SLC9C1Q4G0N8 1177 aa19.56■□□□□ 0.72
ERCC1-201ENST00000013807 GORABQ5T7V8 394 aa19.56■□□□□ 0.72
ERCC1-201ENST00000013807 PI16Q6UXB8 463 aa19.56■□□□□ 0.72
ERCC1-201ENST00000013807 FASTKD5Q7L8L6 764 aaKnown RBP19.56■□□□□ 0.72
ERCC1-201ENST00000013807 PRRT2Q7Z6L0 340 aaPredicted RBP19.56■□□□□ 0.72
ERCC1-201ENST00000013807 ZNF512BQ96KM6 892 aaPredicted RBP19.56■□□□□ 0.72
ERCC1-201ENST00000013807 ARHGAP39Q9C0H5 1083 aa19.56■□□□□ 0.72
ERCC1-201ENST00000013807 NOP58Q9Y2X3 529 aaKnown RBP19.56■□□□□ 0.72
ERCC1-201ENST00000013807 MAST2Q6P0Q8 1798 aa19.55■□□□□ 0.72
ERCC1-201ENST00000013807 ZBTB7BO15156 539 aaPredicted RBP19.55■□□□□ 0.72
ERCC1-201ENST00000013807 ZSCAN29Q8IWY8 852 aaPredicted RBP19.55■□□□□ 0.72
ERCC1-201ENST00000013807 ZHX2Q9Y6X8 837 aa19.55■□□□□ 0.72
ERCC1-201ENST00000013807 BCRP11274 1271 aa19.54■□□□□ 0.72
ERCC1-201ENST00000013807 CTGFP29279 349 aa19.54■□□□□ 0.72
ERCC1-201ENST00000013807 TBC1D9Q6ZT07 1266 aa19.54■□□□□ 0.72
ERCC1-201ENST00000013807 PARK7Q99497 189 aaKnown RBP19.54■□□□□ 0.72
ERCC1-201ENST00000013807 PICK1Q9NRD5 415 aa19.54■□□□□ 0.72
ERCC1-201ENST00000013807 CEP290O15078 2479 aa19.53■□□□□ 0.72
ERCC1-201ENST00000013807 SIPA1L1O43166 1804 aa19.53■□□□□ 0.72
ERCC1-201ENST00000013807 HNRNPUQ00839 825 aaKnown RBP eCLIP19.53■□□□□ 0.72
ERCC1-201ENST00000013807 PICALMQ13492 652 aa19.53■□□□□ 0.72
ERCC1-201ENST00000013807 TNNI3KQ59H18 835 aa19.53■□□□□ 0.72
ERCC1-201ENST00000013807 MIER1Q8N108 512 aa19.53■□□□□ 0.72
ERCC1-201ENST00000013807 TRIM47Q96LD4 638 aa19.53■□□□□ 0.72
ERCC1-201ENST00000013807 SRRDQ9UH36 339 aa19.53■□□□□ 0.72
ERCC1-201ENST00000013807 CPA4Q9UI42 421 aa19.53■□□□□ 0.72
ERCC1-201ENST00000013807 FPGT-TNNI3KV9GXZ4 949 aa19.53■□□□□ 0.72
ERCC1-201ENST00000013807 EN2P19622 333 aaPredicted RBP19.52■□□□□ 0.72
ERCC1-201ENST00000013807 PSMC4P43686 418 aa19.52■□□□□ 0.72
ERCC1-201ENST00000013807 PPP4CP60510 307 aa19.52■□□□□ 0.72
ERCC1-201ENST00000013807 TMEM106CQ9BVX2 250 aa19.52■□□□□ 0.72
ERCC1-201ENST00000013807 OSBPL5Q9H0X9 879 aaPredicted RBP19.52■□□□□ 0.72
ERCC1-201ENST00000013807 RAI14Q9P0K7 980 aa19.52■□□□□ 0.72
ERCC1-201ENST00000013807 LOC285556D6RIA3 1793 aa19.52■□□□□ 0.71
ERCC1-201ENST00000013807 RLBP1P12271 317 aa19.51■□□□□ 0.71
ERCC1-201ENST00000013807 HOXD10P28358 340 aa19.51■□□□□ 0.71
ERCC1-201ENST00000013807 CCDC158Q5M9N0 1113 aa19.51■□□□□ 0.71
ERCC1-201ENST00000013807 TBC1D2Q9BYX2 928 aa19.51■□□□□ 0.71
ERCC1-201ENST00000013807 LRP2BPQ9P2M1 347 aa19.51■□□□□ 0.71
ERCC1-201ENST00000013807 SURF6O75683 361 aaKnown RBP19.5■□□□□ 0.71
ERCC1-201ENST00000013807 SLURP2P0DP57 97 aa19.5■□□□□ 0.71
ERCC1-201ENST00000013807 DBNDD2Q9BQY9 259 aa19.5■□□□□ 0.71
ERCC1-201ENST00000013807 CYP2E1P05181 493 aaPredicted RBP19.49■□□□□ 0.71
ERCC1-201ENST00000013807 CYP2C8P10632 490 aa19.49■□□□□ 0.71
ERCC1-201ENST00000013807 PLCG2P16885 1265 aa19.49■□□□□ 0.71
ERCC1-201ENST00000013807 OSBPP22059 807 aa19.49■□□□□ 0.71
ERCC1-201ENST00000013807 METTL16Q86W50 562 aaKnown RBP19.49■□□□□ 0.71
ERCC1-201ENST00000013807 FTSJ3Q8IY81 847 aaKnown RBP19.49■□□□□ 0.71
ERCC1-201ENST00000013807 DHX36Q9H2U1 1008 aaKnown RBP19.49■□□□□ 0.71
ERCC1-201ENST00000013807 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.49■□□□□ 0.71
ERCC1-201ENST00000013807 HERC5Q9UII4 1024 aaKnown RBP19.49■□□□□ 0.71
ERCC1-201ENST00000013807 ZBED9Q6R2W3 1325 aa19.49■□□□□ 0.71
ERCC1-201ENST00000013807 BAG3O95817 575 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms