RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 CALCOCO1Q9P1Z2 691 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 FER1L4A9Z1Z3 1794 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 LOC102724159A0A0B4J2E5 919 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 ZRANB2O95218 330 aaKnown RBP eCLIP12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 PWP2Q15269 919 aaKnown RBP12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 SLC9C2Q5TAH2 1124 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 RESP18Q5W5W9 173 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 DESI2Q9BSY9 194 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 SLC26A6Q9BXS9 759 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 ZSWIM4Q9H7M6 989 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 INTS13Q9NVM9 706 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 GOLGA8AA7E2F4 631 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 CLGNO14967 610 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 ZBTB43O43298 467 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 PIP4K2BP78356 416 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 APOA5Q6Q788 366 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 TICAM2Q86XR7 235 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 CCDC82Q8N4S0 544 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 FAM89AQ96GI7 184 aa12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 ZCCHC17Q9NP64 241 aaKnown RBP12.06□□□□□ -0.48
CX3CL1-201ENST00000006053 BMP6P22004 513 aa12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 CYP2C19P33261 490 aa12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 TOGARAM2Q6ZUX3 1019 aa12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 NEK11Q8NG66 645 aa12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 MAP3K14Q99558 947 aa12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 C19orf44Q9H6X5 657 aa12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 NFE2L3Q9Y4A8 694 aa12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 ARFGEF2Q9Y6D5 1785 aa12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 KAT6BQ8WYB5 2073 aa12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 KDM4FA0A1W2PPD8 638 aa12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 CUTAO60888 179 aa12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 PPP2R3AQ06190 1150 aa12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 METTL24Q5JXM2 366 aa12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 NBPF3Q9H094 633 aa12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 CPDO75976 1380 aa12.05□□□□□ -0.48
CX3CL1-201ENST00000006053 SH2B2O14492 632 aaPredicted RBP12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 TMEM139Q8IV31 216 aa12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 GRAMD1CQ8IYS0 662 aa12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 MPHOSPH8Q99549 860 aa12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 SCN11AQ9UI33 1791 aa12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 TPM1P09493 284 aa12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 HNRNPH2P55795 449 aaKnown RBP12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 GRIN1Q05586 938 aa12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 TMEM67Q5HYA8 995 aa12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 TMEM94Q12767 1356 aa12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 POLR2DO15514 142 aaKnown RBP12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 SASH3O75995 380 aa12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 PRR29P0C7W0 189 aa12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 MCAMP43121 646 aa12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 FMR1Q06787 632 aaKnown RBP eCLIP12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 IFIT5Q13325 482 aaKnown RBP12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 KRI1Q8N9T8 703 aaKnown RBP12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 TOMM22Q9NS69 142 aa12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 ATG3Q9NT62 314 aa12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 MAN1B1Q9UKM7 699 aa12.04□□□□□ -0.48
CX3CL1-201ENST00000006053 ADAMTS7Q9UKP4 1686 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 BTBD18B2RXH4 712 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 RANBP6O60518 1105 aaKnown RBP12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 OAS2P29728 719 aaKnown RBP12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 FCHSD1Q86WN1 690 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 CCDC12Q8WUD4 166 aaPredicted RBP12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 SERTAD1Q9UHV2 236 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 HOOK1Q9UJC3 728 aaKnown RBP12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 KCNJ14Q9UNX9 436 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 SSRP1Q08945 709 aaKnown RBP12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 SPECC1LQ69YQ0 1117 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 CC2D1AQ6P1N0 951 aaPredicted RBP12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 SYNE4Q8N205 404 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 TC2NQ8N9U0 490 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 CPLX3Q8WVH0 158 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 IRX2Q9BZI1 471 aaPredicted RBP12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 UBN2Q6ZU65 1347 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 TBC1D8O95759 1140 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 ST5P78524 1137 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 MTF1Q14872 753 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 POSTNQ15063 836 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 RRP12Q5JTH9 1297 aaKnown RBP12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 EP400NLQ6ZTU2 488 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 DHX58Q96C10 678 aa12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 SAMSN1Q9NSI8 373 aaKnown RBP12.03□□□□□ -0.48
CX3CL1-201ENST00000006053 NWD2Q9ULI1 1742 aa12.02□□□□□ -0.48
CX3CL1-201ENST00000006053 IFIT3O14879 490 aaKnown RBP12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 ADD2P35612 726 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 FAM193AP78312 1265 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 MAP3K9P80192 1104 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 LDHAL6AQ6ZMR3 332 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 CREBRFQ8IUR6 639 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 SMARCE1Q969G3 411 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 PARD6BQ9BYG5 372 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 ARFGAP3Q9NP61 516 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 LZTFL1Q9NQ48 299 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 SLC12A7Q9Y666 1083 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 ZNF532Q9HCE3 1301 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 GOLGA6L9A6NEM1 432 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 STX10O60499 249 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms