RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Ercc5P35689 1170 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Zfyve27Q3TXX3 415 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Nap1l4Q78ZA7 375 aaKnown RBP15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Rexo1Q7TT28 1213 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Bicdl2Q8CHW5 507 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Kiaa1024Q8K3V7 917 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Acsl3Q9CZW4 720 aaKnown RBP15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Sorbs3Q9R1Z8 733 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Plcb1Q9Z1B3 1216 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Bfsp1A2AMT1 669 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Zbtb16Q3UQ17 673 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Pls1Q3V0K9 630 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Vat1lQ80TB8 417 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Krt222Q8CCX5 294 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Atp2a1Q8R429 994 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Pcdhb22Q91XZ8 794 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Bmp2kQ91Z96 1138 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Naip7Q9JIB3 1402 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Naip6Q9JIB6 1403 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Ccdc13D3YV10 709 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Ankrd49Q8VE42 238 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Ribc1Q9D0B8 379 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Nfil3O08750 462 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 NelfbQ8C4Y3 580 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Pde6cQ91ZQ1 861 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Irs4Q9Z0Y7 1216 aa15.56■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Sos2Q02384 1333 aa15.55■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Ccdc160Q3UYG1 323 aa15.55■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Myl10Q62082 202 aa15.55■□□□□ 0.08
Col3a1-201ENSMUST00000087883 AticQ9CWJ9 592 aaKnown RBP15.55■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Stk38lQ7TSE6 464 aa15.55■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Sestd1Q80UK0 696 aa15.55■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Slc51bQ80WK2 128 aa15.55■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Fhdc1Q3ULZ2 1149 aa15.55■□□□□ 0.08
Col3a1-201ENSMUST00000087883 DgkiD3YWQ0 1071 aa15.55■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Rps6ka1P18653 724 aa15.55■□□□□ 0.08
Col3a1-201ENSMUST00000087883 IqceQ6PCQ0 778 aa15.55■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Nucks1Q80XU3 234 aaKnown RBP15.55■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Zscan25B2RX31 543 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Ncf2O70145 525 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Evi5P97366 809 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Mdh1bQ5F204 500 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Zmynd15Q8C0R7 736 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Spata2Q8K004 515 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Sde2Q8K1J5 448 aaKnown RBP15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Ifih1Q8R5F7 1025 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Bin2D3Z6Q9 489 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Cetn3O35648 167 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Sem1P60897 70 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Serpinb1cQ5SV42 375 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Glg1Q61543 1175 aaKnown RBP15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Gpbp1Q6NXH3 473 aaKnown RBP15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Zscan22Q8BGS5 496 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Tbc1d4Q8BYJ6 1307 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Gm4758L7N258 96 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Atp1a3Q6PIC6 1013 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Fgd5Q80UZ0 1219 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Sar1bQ9CQC9 198 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Bzw2Q91VK1 419 aaKnown RBP15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Ddx41Q91VN6 622 aaKnown RBP15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Rsph3bQ9DA80 389 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 PdclQ9DBX2 301 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 EnahQ03173 802 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Zfp51Q3U4L8 781 aa15.54■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Otud7bB2RUR8 840 aa15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Taf4E9QAP7 1042 aaKnown RBP15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 MthfslL7N466 203 aa15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Aifm3Q3TY86 605 aa15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Ppip5k1A2ARP1 1436 aa15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Gm10110D3Z5M2 615 aa15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Svs3aF2Z472 265 aa15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Prl7a2O54831 253 aa15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Tspyl1O88852 379 aa15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Cep63Q3UPP8 700 aa15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 PicalmQ7M6Y3 660 aaKnown RBP15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Hgh1Q8C3I8 393 aa15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 LratQ9JI60 231 aa15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Lrrc74aA0A1Y7VMD6 494 aa15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Gm6583E9Q8Z1 469 aa15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Mettl5Q8K1A0 209 aa15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Ythdc2B2RR83 1445 aaKnown RBP15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Rab3gap1Q80UJ7 981 aa15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Eif4g1Q6NZJ6 1600 aaKnown RBP15.53■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Heatr4E9Q357 955 aa15.52■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Timm10P62073 90 aa15.52■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Zfp781Q0P5U5 243 aa15.52■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Lrrc36Q3V0M2 755 aa15.52■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Rapgef6Q5NCJ1 1609 aa15.52■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Esyt2Q3TZZ7 845 aa15.52■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Zkscan8Q8BSL0 588 aa15.52■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Znf830Q8R1N0 363 aaKnown RBP15.52■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Bbs5Q9CZQ9 341 aa15.52■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Ddx24Q9ESV0 857 aaKnown RBP15.52■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Tmem94Q7TSH8 1360 aa15.52■□□□□ 0.08
Col3a1-201ENSMUST00000087883 3425401B19RikD3Z1D3 1412 aa15.52■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Thoc2B1AZI6 1594 aaKnown RBP15.52■□□□□ 0.08
Col3a1-201ENSMUST00000087883 ParnQ8VDG3 624 aa15.52■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Desi2Q9D291 194 aa15.52■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Plagl1Q9JLQ4 704 aa15.52■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Stk36Q69ZM6 1316 aa15.52■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms