RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Rb1P13405 921 aa13.85□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Pcmtd1P59913 357 aa13.85□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Flt1P35969 1333 aa13.85□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Vwa3bJ9JI28 736 aa13.85□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Speer4dL7N216 212 aa13.85□□□□□ -0.19
Upk3b-201ENSMUST00000062606 TxlnbQ8VBT1 685 aa13.85□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Rhbdl3P58873 404 aa13.85□□□□□ -0.19
Upk3b-201ENSMUST00000062606 St18Q80TY4 1045 aa13.85□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Cfap69Q8BH53 942 aa13.85□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Zc3h15Q3TIV5 426 aaKnown RBP13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Q8C5K5 320 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Ttc5Q99LG4 440 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Sh3bp5lQ99LH9 392 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Taf1dQ9D4V4 322 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Znf496Q5SXI5 585 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 CrebrfQ8CDG5 640 aaKnown RBP13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Lamb1P02469 1786 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 FAM186AQ9D9R9 1790 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Zkscan16A2ALW2 728 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Mcm5P49718 733 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Nub1P54729 614 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Rad50P70388 1312 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 PsdQ5DTT2 1024 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Tspoap1Q7TNF8 1846 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Tspan18Q80WR1 248 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 EvplQ9D952 2035 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Lonp2Q9DBN5 852 aa13.84□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Slurp2P0DP59 97 aa13.83□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Unc5clQ6R653 518 aa13.83□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Zkscan8Q8BSL0 588 aa13.83□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Riok1Q922Q2 567 aa13.83□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Rnf123Q5XPI3 1314 aa13.83□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Cspp1B2RX88 1205 aa13.83□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Olfr247E9PVJ7 320 aa13.83□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Olfr819K7N727 320 aa13.83□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Pa2g4P50580 394 aaKnown RBP13.83□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Rgs12Q8CGE9 1381 aa13.83□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Bcorl1A2AQH4 1781 aa13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Gm17615E9Q9P2 165 aa13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Eva1cP58659 440 aa13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Filip1lQ6P6L0 1131 aa13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Rbm6S4R1W5 1118 aaKnown RBP13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Pde3bQ61409 1100 aa13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Eif2b5Q8CHW4 717 aa13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Ncoa5Q91W39 579 aaKnown RBP13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Q9D2X8 372 aa13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Cfap73J3QPZ5 306 aa13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Cpsf2O35218 782 aaKnown RBP13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 TsksO54887 585 aa13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Igflr1Q3U4N7 345 aa13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Cyp2c67Q569X9 491 aa13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Trim37Q6PCX9 961 aa13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Rhot2Q8JZN7 620 aa13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Tmem143Q8VD26 458 aa13.82□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Cacna1fQ9JIS7 1985 aa13.81□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Rsph10bE9PYQ0 876 aa13.81□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Zfp213E9QAW0 468 aa13.81□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Atp11aP98197 1187 aa13.81□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Fam228bQ497Q6 232 aa13.81□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Trim42Q9D2H5 723 aa13.81□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Odf2lQ9D478 642 aa13.81□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Paip2Q9D6V8 124 aa13.81□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Ttll12Q3UDE2 639 aa13.81□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Nell2Q61220 819 aa13.81□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Samm50Q8BGH2 469 aa13.81□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Q8C6G1 249 aa13.81□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Lmbr1Q9JIT0 490 aa13.81□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Rps6ka6Q7TPS0 764 aa13.81□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Atp6v1dP57746 247 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 EappQ5BU09 281 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Taf5lQ91WQ5 589 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Ppp4r3bQ922R5 820 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Osbpl5Q9ER64 874 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Ube3bQ9ES34 1070 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Bag3Q9JLV1 577 aaKnown RBP13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Usp35M0QWN7 1009 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 EgfrQ01279 1210 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 DbnlQ62418 436 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Rab3gap1Q80UJ7 981 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Hirip3Q8BLH7 601 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Rps6kc1Q8BLK9 1056 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Ranbp17Q99NF8 1088 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Rdm1Q9CQK3 281 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Vps33aQ9D2N9 598 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Zscan29E9Q5B4 869 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Hmox1P14901 289 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Erc2Q6PH08 957 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Ankrd24Q80VM7 985 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Nol12Q8BG17 217 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 HlfQ8BW74 295 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Ccar2Q8VDP4 922 aaKnown RBP13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Smc1bQ920F6 1248 aa13.8□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Slc4a1P04919 929 aa13.79□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Abcf1Q6P542 837 aaKnown RBP13.79□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Fam160b2Q80YR2 744 aa13.79□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Naa30Q8CES0 364 aa13.79□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Mboat7Q8CHK3 473 aa13.79□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Nop14Q8R3N1 860 aaKnown RBP13.79□□□□□ -0.2
Upk3b-201ENSMUST00000062606 Ccdc39Q9D5Y1 937 aa13.79□□□□□ -0.2
Upk3b-201ENSMUST00000062606 MccE9PWI3 1003 aa13.79□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms