RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Etnk1Q9D4V0 363 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Tfcp2Q9ERA0 502 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Mroh6V9GX81 722 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Tom1O88746 492 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Pcdhb14Q6PB90 796 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Clic6Q8BHB9 596 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Nop2Q922K7 793 aaKnown RBP12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Elf2Q9JHC9 593 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Mast3Q3U214 1321 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Gm43638A0A0J9YU36 694 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Myl3P09542 204 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Myo1bP46735 1107 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Taf3Q5HZG4 932 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Mei4Q8BRM6 389 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Adam1bQ8R534 806 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Lonrf3Q9D4H7 753 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Rai14Q9EP71 979 aaKnown RBP12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Tnrc6cQ3UHC0 1690 aaKnown RBP12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ric1Q69ZJ7 1422 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 CoblQ5NBX1 1337 aaKnown RBP12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Prr5lA2AVJ5 370 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ugt1a6bK9J7B2 531 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Diaph1O08808 1255 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ccng2O08918 344 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Dapk3O54784 448 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Cplx2P84086 134 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ifit1bl2Q3U687 466 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ugt1a6Q64435 531 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ift122Q6NWV3 1182 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ugt1a7cQ6ZQM8 531 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Bsdc1Q80Y55 427 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ankrd23Q812A3 306 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Haus7Q8BKT8 364 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Rbm19Q8R3C6 952 aaKnown RBP12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Tmem143Q8VD26 458 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Pcdhb22Q91XZ8 794 aa12.24□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Grin2dQ03391 1323 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Pet2A2AHY8 747 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Klra1P20937 262 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Anp32eP97822 260 aaKnown RBP12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Usp49Q6P9L4 685 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Jmjd4Q8BFT6 427 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Cgref1Q8R1U2 281 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Krt84Q99M73 603 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ube3bQ9ES34 1070 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Cdc27A2A6Q5 825 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Plcb3P51432 1234 aaKnown RBP12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Rtel1Q0VGM9 1203 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 C87499Q3UX49 493 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Dnm3Q8BZ98 863 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Paf1Q8K2T8 535 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Zkscan3Q91VW9 553 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Plekho1Q9JIY0 408 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Foxo4Q9WVH3 505 aa12.23□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Zfp397Q7TNK4 527 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Washc1Q8VDD8 475 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Riok1Q922Q2 567 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Gnl2Q99LH1 728 aaKnown RBP12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Trim34aQ99PP6 485 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Yeats4Q9CR11 227 aaKnown RBP12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ppil4Q9CXG3 492 aaKnown RBP12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Nav1Q8CH77 1875 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Prss40A6H6T1 365 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Map2k1P31938 393 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Pex1Q5BL07 1284 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Esco1Q69Z69 843 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ttc12Q8BW49 704 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Rbm28Q8CGC6 750 aaKnown RBP12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Tubgcp2Q921G8 905 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Kcnq5Q9JK45 933 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Mast2Q60592 1734 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Naaladl2A0A0N4SUJ3 795 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Pde4bB1AWC9 736 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Usp13Q5BKP2 858 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ankrd40Q5SUE8 363 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ube3cQ80U95 1083 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Psrc1Q9D0P7 329 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Trip6Q9Z1Y4 480 aa12.22□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Mrc1Q61830 1456 aa12.21□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Sall1Q9ER74 1322 aa12.21□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ccdc174Q3U155 467 aa12.21□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Znf496Q5SXI5 585 aa12.21□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Trerf1Q8BXJ2 1205 aa12.21□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ccdc47Q9D024 483 aaKnown RBP12.21□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Kdm3aQ6PCM1 1323 aa12.21□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Dynll1P63168 89 aa12.21□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 SfswapQ3USH5 945 aaKnown RBP12.21□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Pm20d1Q8C165 503 aa12.21□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Arl8aQ8VEH3 186 aa12.21□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Polr2dQ9D7M8 142 aaKnown RBP12.21□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 NgdnQ9DB96 315 aaKnown RBP12.21□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Mapk8ip1Q9WVI9 707 aa12.21□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Kcnh3Q9WVJ0 1095 aa12.21□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Fer1l6E0CZ42 1862 aa12.21□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Kat6bQ8BRB7 1872 aa12.21□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 IntuQ059U7 942 aa12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Slc38a10Q5I012 1090 aa12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Sept9Q80UG5 583 aa12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Alx1Q8C8B0 326 aa12.2□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Sirt2Q8VDQ8 389 aa12.2□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 64.2 ms