RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Klrc1Q9Z202 244 aa13.7□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Wdr63B2RY71 923 aa13.69□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Slc4a4O88343 1079 aa13.69□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Rasa3Q60790 834 aa13.69□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 HelbQ6NVF4 1074 aa13.69□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 KhnynQ80U38 671 aa13.69□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Lrrc24Q8BHA1 521 aa13.69□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Spata21Q8BHW6 681 aa13.69□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Ppp1r11Q8K1L5 131 aa13.69□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Fam83aQ8K2P2 436 aa13.69□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Snapc2Q91XA5 359 aa13.69□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Rnf181Q9CY62 165 aa13.69□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Rai14Q9EP71 979 aaKnown RBP13.69□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Btbd19S4R1I0 287 aa13.69□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Fam205a1D3YZF6 1314 aa13.68□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Pitpnm2Q6ZPQ6 1335 aa13.68□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Skint7A7XV04 395 aa13.68□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Zfp953Q3UPV7 304 aa13.68□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Prpf38aQ4FK66 312 aaKnown RBP13.68□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Trnp1Q80ZI1 223 aa13.68□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Myt1Q8CFC2 1127 aa13.68□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Fbxo33Q8VE08 562 aa13.68□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Kif18aQ91WD7 886 aa13.68□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 GrapQ9CX99 217 aa13.68□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 CsadQ9DBE0 493 aa13.68□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Plekhg2Q6KAU7 1340 aa13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Pagr1bF6V0H0 108 aa13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Hoxa7P02830 229 aa13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 ThbdP15306 577 aa13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Evi5P97366 809 aa13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Fam178bQ24JP3 464 aa13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Calr4Q3TQS0 420 aa13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Spata5Q3UMC0 893 aaKnown RBP13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Tfcp2l1Q3UNW5 479 aa13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Sh2d1b2Q45HK4 132 aa13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Ctr9Q62018 1173 aaKnown RBP13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Garem2Q6PAJ3 880 aa13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Il31raQ8K5B1 716 aa13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Rbm43Q99J64 343 aa13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Pagr1aQ99L02 253 aa13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Dynll2Q9D0M5 89 aa13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Zbtb12Q9Z150 459 aa13.67□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Gm36210A0A1B0GS00 229 aa13.66□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Il7P10168 154 aa13.66□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Trmt1Q3TX08 663 aa13.66□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Aak1Q3UHJ0 959 aa13.66□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Ppm1gQ61074 542 aa13.66□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Senp6Q6P7W0 1132 aa13.66□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Slc9c1Q6UJY2 1175 aa13.66□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Ube2oQ6ZPJ3 1288 aa13.66□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Cog6Q8R3I3 657 aa13.66□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Ccdc39Q9D5Y1 937 aa13.66□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Plxnb2B2RXS4 1842 aa13.65□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 CrcpO35427 148 aa13.65□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Atoh1P48985 351 aa13.65□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Ncf1Q09014 390 aa13.65□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Otud5Q3U2S4 566 aa13.65□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 D630036H23RikQ3UQD6 204 aa13.65□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Adam39Q7M762 756 aa13.65□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Inpp5bQ8K337 993 aa13.65□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 HibadhQ99L13 335 aaKnown RBP13.65□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Bap1Q99PU7 728 aa13.65□□□□□ -0.22
Ccdc28b-201ENSMUST00000030586 Adgra2Q91ZV8 1336 aa13.64□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Rgs12Q8CGE9 1381 aa13.64□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Nkx1-1G3UXB3 402 aa13.64□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Has3O08650 554 aa13.64□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 PtpraP18052 829 aa13.64□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Brip1Q5SXJ3 1174 aa13.64□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Fxr1Q61584 677 aaKnown RBP13.64□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Stac3Q8BZ71 360 aa13.64□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Rtp1Q8C8C1 263 aa13.64□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Ero1bQ8R2E9 467 aa13.64□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Snap47Q8R570 413 aa13.64□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Ak7Q9D2H2 614 aa13.64□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Fam186bD3Z420 943 aa13.63□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 VrtnQ3SYK4 740 aa13.63□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Tmed8Q3UHI4 326 aa13.63□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Acap3Q6NXL5 833 aa13.63□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Shisa4Q8CA71 197 aa13.63□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Sirt2Q8VDQ8 389 aa13.63□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Q9D2X8 372 aa13.63□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Tanc1Q0VGY8 1856 aa13.63□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Col11a1Q61245 1804 aa13.62□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Eps15P42567 897 aa13.62□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 CtshP49935 333 aa13.62□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Gnat2P50149 354 aa13.62□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 MyrflQ3UN70 904 aa13.62□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Kansl1lQ5DTI6 991 aa13.62□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Alx1Q8C8B0 326 aa13.62□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Apbb1ipQ8R5A3 670 aa13.62□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 StrbpQ91WM1 672 aaKnown RBP13.62□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Ndufv1Q91YT0 464 aa13.62□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Efcc1Q9JJF6 558 aa13.62□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Vmn2r68L7N2B3 851 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Itgb7P26011 806 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 CenpbP27790 599 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Ccnd3P30282 292 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Ercc3P49135 783 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Hspd1P63038 573 aaKnown RBP13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Qrich1Q3UA37 777 aa13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms