RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Nek3Q9R0A5 511 aa21.14■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Kcnh4A2A5F7 1018 aa21.14■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Bnip3O55003 187 aa21.14■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Cplx2P84086 134 aa21.14■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Ift122Q6NWV3 1182 aa21.14■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 IqcgQ80W32 419 aa21.14■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Polr2dQ9D7M8 142 aaKnown RBP21.14■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Pik3ap1Q9EQ32 811 aa21.14■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Gm5624F6ZZG8 207 aa21.13■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 CrcpO35427 148 aa21.13■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Fam89aQ14BJ1 175 aa21.13■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Ckap2Q3V1H1 664 aa21.13■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Znf496Q5SXI5 585 aa21.13■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Rtn1Q8K0T0 780 aa21.13■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Plekho1Q9JIY0 408 aa21.13■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Cyp2c23E9Q5K4 494 aa21.13■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Tpm1P58771 284 aa21.13■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Znf532Q6NXK2 1036 aa21.13■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Slc44a1Q6X893 653 aa21.13■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Nme8Q715T0 586 aa21.13■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Pla2g4bP0C871 782 aa21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Pex1Q5BL07 1284 aa21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Asnsd1Q8BFS9 627 aa21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Slc39a11Q8BWY7 342 aa21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Ddx54Q8K4L0 874 aaKnown RBP21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Gpr108Q91WD0 569 aa21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 FliiQ9JJ28 1271 aa21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Myh6Q02566 1938 aaKnown RBP21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 C87499Q3UX49 493 aa21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Terb1Q8C0V1 768 aa21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Vps16Q920Q4 839 aa21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Gnl2Q99LH1 728 aaKnown RBP21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Fkbp1aP26883 108 aaKnown RBP21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Cers3Q1A3B0 383 aa21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Miga2Q8BK03 593 aa21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Stk39Q9Z1W9 556 aa21.12■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Cyp4x1Q6A152 507 aa21.11■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Zkscan5Q9Z1D8 819 aa21.11■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Cd3dP04235 173 aa21.11■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Spata5Q3UMC0 893 aaKnown RBP21.11■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Abtb2Q7TQI7 1024 aa21.11■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Ccdc47Q9D024 483 aaKnown RBP21.11■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 GdaQ9R111 454 aa21.11■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Speer4dL7N216 212 aa21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 GmnnO88513 206 aa21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Sik1Q60670 779 aa21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Luc7l2Q7TNC4 392 aaKnown RBP21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Klhl30Q8C3F7 581 aa21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 WtapQ9ER69 396 aa21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Cfap44E9Q5M6 1843 aa21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Prss40A6H6T1 365 aa21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Snrpa1P57784 255 aaKnown RBP21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Q3TYL0 343 aa21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Slf2Q6P9P0 1278 aa21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Olfr119Q7TRJ5 321 aa21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Csrnp2Q8BGQ2 534 aa21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Mical1Q8VDP3 1048 aa21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Tgs1Q923W1 853 aa21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Stag1Q9D3E6 1258 aa21.1■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Znfx1Q8R151 1909 aaKnown RBP21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Phldb3E9QAF4 648 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Pde11aP0C1Q2 933 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Irx2P81066 474 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Esco1Q69Z69 843 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Sept9Q80UG5 583 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Vps18Q8R307 973 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Washc1Q8VDD8 475 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Bap1Q99PU7 728 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Rapgef4Q9EQZ6 1011 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Myh7bA2AQP0 1941 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Abl1P00520 1123 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Slc7a1Q09143 622 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 HelbQ6NVF4 1074 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Clec16aQ80U30 1036 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Jmjd4Q8BFT6 427 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Tspyl4Q8VD63 406 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Trim11Q99PQ2 467 aa21.09■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 AfdnQ9QZQ1 1820 aaKnown RBP21.08■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Jakmip2D3YXK0 820 aa21.08■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Il7P10168 154 aa21.08■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Ankrd40Q5SUE8 363 aa21.08■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Ttc12Q8BW49 704 aa21.08■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Etf1Q8BWY3 437 aaKnown RBP21.08■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Ankk1Q8BZ25 745 aa21.08■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Ccdc150Q8CDI7 1110 aa21.08■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Tmem143Q8VD26 458 aa21.08■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 BaatQ91X34 420 aa21.08■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 BccipQ9CWI3 316 aa21.08■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 Cbx6Q9DBY5 414 aa21.08■□□□□ 0.97
Ccdc3-201ENSMUST00000027988 NesQ6P5H2 1864 aaKnown RBP21.08■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Casp1P29452 402 aa21.08■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Cyp24a1Q64441 514 aa21.08■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 CpvlQ9D3S9 478 aa21.08■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Trip6Q9Z1Y4 480 aa21.08■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Myh3P13541 1940 aa21.07■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Gtf2f1Q3THK3 508 aaKnown RBP21.07■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Apobec3Q99J72 440 aaKnown RBP21.07■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 LtbrP50284 415 aa21.07■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Nek1P51954 1203 aa21.07■□□□□ 0.96
Ccdc3-201ENSMUST00000027988 Paxbp1P58501 919 aa21.07■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms