RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Ubxn1Q922Y1 297 aa14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Stx17Q9D0I4 301 aa14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Sf3a3Q9D554 501 aaKnown RBP14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Nol7Q9D7Z3 254 aaKnown RBP14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Gm1993A6X8I0 212 aa14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 SlxD3Z347 212 aa14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Arhgef2Q60875 985 aa14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 PpanQ91YU8 470 aaKnown RBP14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 ByslO54825 436 aaKnown RBP14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Pak1O88643 545 aa14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Rad23aP54726 363 aa14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Pde4dQ01063 747 aa14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Apol10aQ8CCA5 318 aa14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Pcdha7Q91Y13 937 aa14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Msh6P54276 1358 aaKnown RBP14.28□□□□□ -0.12
Msh6-201ENSMUST00000005503 Gm28510A0A087WP28 240 aa14.27□□□□□ -0.12
Msh6-201ENSMUST00000005503 Gngt1Q61012 74 aa14.27□□□□□ -0.12
Msh6-201ENSMUST00000005503 Gbp4Q61107 620 aa14.27□□□□□ -0.12
Msh6-201ENSMUST00000005503 Epb41l2O70318 988 aaKnown RBP14.27□□□□□ -0.12
Msh6-201ENSMUST00000005503 Rtel1Q0VGM9 1203 aa14.27□□□□□ -0.12
Msh6-201ENSMUST00000005503 Olfm5Q8BU90 496 aa14.27□□□□□ -0.12
Msh6-201ENSMUST00000005503 Stac3Q8BZ71 360 aa14.27□□□□□ -0.12
Msh6-201ENSMUST00000005503 Suclg2Q9Z2I8 433 aa14.27□□□□□ -0.12
Msh6-201ENSMUST00000005503 Wdr70Q3TWF6 657 aa14.27□□□□□ -0.13
Msh6-201ENSMUST00000005503 ZgpatQ8VDM1 511 aa14.27□□□□□ -0.13
Msh6-201ENSMUST00000005503 A0A1W2P6Q8 802 aa14.27□□□□□ -0.13
Msh6-201ENSMUST00000005503 Gm9048A0A1W2P7H4 802 aa14.27□□□□□ -0.13
Msh6-201ENSMUST00000005503 A0A1W2P7S8 802 aa14.27□□□□□ -0.13
Msh6-201ENSMUST00000005503 A0A1W2P7Z8 802 aa14.27□□□□□ -0.13
Msh6-201ENSMUST00000005503 Gm9046A0A1W2P855 802 aa14.27□□□□□ -0.13
Msh6-201ENSMUST00000005503 Cdc5lQ6A068 802 aaKnown RBP14.27□□□□□ -0.13
Msh6-201ENSMUST00000005503 TxlnaQ6PAM1 554 aaKnown RBP14.27□□□□□ -0.13
Msh6-201ENSMUST00000005503 Dhx40Q6PE54 779 aaKnown RBP14.27□□□□□ -0.13
Msh6-201ENSMUST00000005503 Kdm1aQ6ZQ88 853 aa14.27□□□□□ -0.13
Msh6-201ENSMUST00000005503 Csrnp2Q8BGQ2 534 aa14.27□□□□□ -0.13
Msh6-201ENSMUST00000005503 Vmn2r23E9PXI5 849 aa14.26□□□□□ -0.13
Msh6-201ENSMUST00000005503 Nfil3O08750 462 aa14.26□□□□□ -0.13
Msh6-201ENSMUST00000005503 Anks1aP59672 1150 aa14.26□□□□□ -0.13
Msh6-201ENSMUST00000005503 Lman1Q9D0F3 517 aa14.26□□□□□ -0.13
Msh6-201ENSMUST00000005503 Sept14Q9DA97 430 aa14.26□□□□□ -0.13
Msh6-201ENSMUST00000005503 Large1Q9Z1M7 756 aa14.26□□□□□ -0.13
Msh6-201ENSMUST00000005503 Gm5934D3Z4U6 212 aa14.26□□□□□ -0.13
Msh6-201ENSMUST00000005503 NelfbQ8C4Y3 580 aa14.26□□□□□ -0.13
Msh6-201ENSMUST00000005503 Bicdl2Q8CHW5 507 aa14.26□□□□□ -0.13
Msh6-201ENSMUST00000005503 Tlcd1Q99JT6 247 aa14.26□□□□□ -0.13
Msh6-201ENSMUST00000005503 Tsnaxip1Q99P25 704 aa14.26□□□□□ -0.13
Msh6-201ENSMUST00000005503 Tcof1O08784 1320 aaKnown RBP14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Gm7347D3YYI9 267 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Ugt1a6bK9J7B2 531 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Zc3h12cQ5DTV4 884 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Ugt1a6Q64435 531 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Ugt1a7cQ6ZQM8 531 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Asap2Q7SIG6 958 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Kiaa1524Q8BWY9 907 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Myl6bQ8CI43 207 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Hexim1Q8R409 356 aaKnown RBP14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Prc1Q99K43 603 aaKnown RBP14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Ndufab1Q9CR21 156 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Ccdc105Q9D4K7 499 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Cdk4P30285 303 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Cdcp1Q5U462 833 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Klc3Q91W40 508 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Cd274Q9EP73 290 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Irs4Q9Z0Y7 1216 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Npc1l1Q6T3U4 1333 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Capn2O08529 700 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Usp44Q8C2S0 711 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Pcdha12Q91Y18 950 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Emilin1Q99K41 1017 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 EhhadhQ9DBM2 718 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Ppp2r3dQ9Z176 491 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Wdr17E9Q271 1322 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Adgrb3Q80ZF8 1522 aa14.25□□□□□ -0.13
Msh6-201ENSMUST00000005503 Tbc1d2B1AVH7 922 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 AcrbpQ3V140 540 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Cyp24a1Q64441 514 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Cdc23Q8BGZ4 597 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Skor1Q8BX46 964 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Q8CEZ4 452 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Ints4Q8CIM8 964 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Prpf40aQ9R1C7 953 aaKnown RBP14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Adcy9P51830 1353 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Klhl34A2AI76 644 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Tubb5P99024 444 aaKnown RBP14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Exoc5Q3TPX4 708 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Ankrd13cQ3UX43 541 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Cdc37Q61081 379 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Prpf40bQ80W14 870 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Uba5Q8VE47 403 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Efcc1Q9JJF6 558 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Dpf1Q9QX66 387 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Pcdhb9E9Q5G2 828 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Ankrd35E9Q9D8 996 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Mapkapk5O54992 473 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Hmx1O70218 332 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Gm12185Q5NCB2 835 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Dph6Q9CQ28 267 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Sar1bQ9CQC9 198 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Klhl40Q9D783 621 aa14.24□□□□□ -0.13
Msh6-201ENSMUST00000005503 Kdm6aO70546 1401 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms