RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W RAM2P29703 316 aa7.61□□□□□ -1.19
LOC1YFR001W DPS1P04802 557 aaKnown RBP7.6□□□□□ -1.19
LOC1YFR001W GYP5Q12344 894 aa7.58□□□□□ -1.2
LOC1YFR001W MAK11P20484 414 aaKnown RBP7.57□□□□□ -1.2
LOC1YFR001W ABP1P15891 592 aaKnown RBP7.56□□□□□ -1.2
LOC1YFR001W VRP1P37370 817 aa7.55□□□□□ -1.2
LOC1YFR001W YDL129WQ07555 291 aa7.55□□□□□ -1.2
LOC1YFR001W DAN4P47179 1161 aa7.52□□□□□ -1.21
LOC1YFR001W HTA1P04911 132 aaKnown RBP7.51□□□□□ -1.21
LOC1YFR001W HTA2P04912 132 aa7.51□□□□□ -1.21
LOC1YFR001W DCW1P36091 449 aa7.51□□□□□ -1.21
LOC1YFR001W SRC1Q03707 834 aa7.51□□□□□ -1.21
LOC1YFR001W MIF2P35201 549 aa7.5□□□□□ -1.21
LOC1YFR001W EDS1P38073 919 aa7.5□□□□□ -1.21
LOC1YFR001W JIP4Q03361 876 aa7.5□□□□□ -1.21
LOC1YFR001W GRE2Q12068 342 aaKnown RBP7.48□□□□□ -1.21
LOC1YFR001W PTC3P34221 468 aaKnown RBP7.47□□□□□ -1.21
LOC1YFR001W COQ8P27697 501 aa7.46□□□□□ -1.22
LOC1YFR001W YEL023CP39992 682 aa7.45□□□□□ -1.22
LOC1YFR001W PTC4P38089 393 aa7.44□□□□□ -1.22
LOC1YFR001W GUT1P32190 709 aa7.42□□□□□ -1.22
LOC1YFR001W ATH1P48016 1211 aa7.42□□□□□ -1.22
LOC1YFR001W SET1P38827 1080 aaKnown RBP7.38□□□□□ -1.23
LOC1YFR001W NST1P53935 1240 aa7.38□□□□□ -1.23
LOC1YFR001W NOP53Q12080 455 aaKnown RBP7.37□□□□□ -1.23
LOC1YFR001W YDR344CQ05510 147 aa7.36□□□□□ -1.23
LOC1YFR001W SOL3P38858 249 aa7.35□□□□□ -1.23
LOC1YFR001W PML39Q03760 334 aa7.29□□□□□ -1.24
LOC1YFR001W SAS10Q12136 610 aaPredicted RBP7.29□□□□□ -1.24
LOC1YFR001W MPH3P0CE00 602 aa7.28□□□□□ -1.24
LOC1YFR001W AI4P03878 556 aa7.27□□□□□ -1.25
LOC1YFR001W ILV3P39522 585 aaKnown RBP7.25□□□□□ -1.25
LOC1YFR001W YGR273CP53329 174 aa7.25□□□□□ -1.25
LOC1YFR001W YPR148CQ06523 435 aa7.25□□□□□ -1.25
LOC1YFR001W IFH1P39520 1085 aa7.24□□□□□ -1.25
LOC1YFR001W ELP4Q02884 456 aaKnown RBP7.24□□□□□ -1.25
LOC1YFR001W MID1P41821 548 aa7.23□□□□□ -1.25
LOC1YFR001W VPS70P47161 811 aa7.2□□□□□ -1.26
LOC1YFR001W ARH1P48360 493 aa7.18□□□□□ -1.26
LOC1YFR001W CKB1P43639 278 aa7.13□□□□□ -1.27
LOC1YFR001W PEX29Q03370 554 aa7.13□□□□□ -1.27
LOC1YFR001W KEX1P09620 729 aa7.12□□□□□ -1.27
LOC1YFR001W SLI15P38283 698 aa7.12□□□□□ -1.27
LOC1YFR001W MPC54Q08550 464 aa7.11□□□□□ -1.27
LOC1YFR001W UBP14P38237 781 aaKnown RBP7.09□□□□□ -1.27
LOC1YFR001W HAP5Q02516 242 aa7.09□□□□□ -1.27
LOC1YFR001W YLR326WQ06170 240 aaKnown RBP7.09□□□□□ -1.27
LOC1YFR001W SPT23P35210 1082 aa7.08□□□□□ -1.28
LOC1YFR001W REF2P42073 533 aaPredicted RBP7.08□□□□□ -1.28
LOC1YFR001W YPL062WQ02781 134 aa7.07□□□□□ -1.28
LOC1YFR001W VHR2P40041 505 aa7.06□□□□□ -1.28
LOC1YFR001W BNI4P53858 892 aa7.05□□□□□ -1.28
LOC1YFR001W DPL1Q05567 589 aa7.05□□□□□ -1.28
LOC1YFR001W NMA111P53920 997 aa7.04□□□□□ -1.28
LOC1YFR001W PBS2P08018 668 aa7.03□□□□□ -1.28
LOC1YFR001W SPB4P25808 606 aaPredicted RBP7.03□□□□□ -1.28
LOC1YFR001W PCS60P38137 543 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
LOC1YFR001W YML082WQ04533 649 aaKnown RBP7.01□□□□□ -1.29
LOC1YFR001W RAD54P32863 898 aa7□□□□□ -1.29
LOC1YFR001W CDC73Q06697 393 aa7□□□□□ -1.29
LOC1YFR001W RAS1P01119 309 aa6.99□□□□□ -1.29
LOC1YFR001W DSF2P38213 736 aa6.99□□□□□ -1.29
LOC1YFR001W PTC2P39966 464 aaKnown RBP6.99□□□□□ -1.29
LOC1YFR001W YDR090CQ03193 310 aa6.99□□□□□ -1.29
LOC1YFR001W COX6P00427 148 aa6.98□□□□□ -1.29
LOC1YFR001W ISU2Q12056 156 aa6.98□□□□□ -1.29
LOC1YFR001W MAK21Q12176 1025 aaKnown RBP6.98□□□□□ -1.29
LOC1YFR001W LEU3P08638 886 aa6.96□□□□□ -1.3
LOC1YFR001W RAM1P22007 431 aa6.94□□□□□ -1.3
LOC1YFR001W KIC1P38692 1080 aa6.93□□□□□ -1.3
LOC1YFR001W MAM3Q12296 706 aa6.93□□□□□ -1.3
LOC1YFR001W TRK1P12685 1235 aa6.92□□□□□ -1.3
LOC1YFR001W YPR015CQ12531 247 aa6.92□□□□□ -1.3
LOC1YFR001W RPP1BP10622 106 aaKnown RBP6.89□□□□□ -1.31
LOC1YFR001W IES2P40154 320 aa6.89□□□□□ -1.31
LOC1YFR001W PDR1P12383 1068 aa6.88□□□□□ -1.31
LOC1YFR001W GAP1P19145 602 aaPredicted RBP6.88□□□□□ -1.31
LOC1YFR001W NUP42P49686 430 aaKnown RBP6.87□□□□□ -1.31
LOC1YFR001W DIT2P21595 489 aa6.84□□□□□ -1.31
LOC1YFR001W ORC6P38826 435 aa6.84□□□□□ -1.31
LOC1YFR001W CSC1Q06538 782 aa6.83□□□□□ -1.32
LOC1YFR001W TFB4Q12004 338 aa6.82□□□□□ -1.32
LOC1YFR001W YNR021WP53723 404 aaKnown RBP6.81□□□□□ -1.32
LOC1YFR001W YRR1Q12172 810 aa6.81□□□□□ -1.32
LOC1YFR001W RPN1P38764 993 aaKnown RBP6.8□□□□□ -1.32
LOC1YFR001W PEX21P50091 288 aa6.8□□□□□ -1.32
LOC1YFR001W LEO1P38439 464 aa6.79□□□□□ -1.32
LOC1YFR001W PSE1P32337 1089 aaKnown RBP6.78□□□□□ -1.32
LOC1YFR001W GYP1Q08484 637 aa6.78□□□□□ -1.32
LOC1YFR001W RGR1P19263 1082 aa6.76□□□□□ -1.33
LOC1YFR001W SAS4Q04003 481 aa6.76□□□□□ -1.33
LOC1YFR001W BUD20Q08004 166 aaPredicted RBP6.76□□□□□ -1.33
LOC1YFR001W TUM1Q08686 304 aaKnown RBP6.76□□□□□ -1.33
LOC1YFR001W GLC3P32775 704 aa6.75□□□□□ -1.33
LOC1YFR001W MVP1P40959 511 aaKnown RBP6.75□□□□□ -1.33
LOC1YFR001W STR2P47164 639 aa6.75□□□□□ -1.33
LOC1YFR001W SDH2P21801 266 aa6.74□□□□□ -1.33
LOC1YFR001W ISM1P48526 1002 aa6.74□□□□□ -1.33
LOC1YFR001W NUD1P32336 851 aa6.73□□□□□ -1.33
LOC1YFR001W AMS1P22855 1083 aa6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms