RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 FAM69CQ0P6D2 419 aa26.83■■□□□ 1.89
SRRM4-204ENST00000641899 ABCC10Q5T3U5 1492 aa26.76■■□□□ 1.87
SRRM4-204ENST00000641899 KIF13AQ9H1H9 1805 aa26.72■■□□□ 1.87
SRRM4-204ENST00000641899 MAPKBP1O60336 1514 aa26.71■■□□□ 1.87
SRRM4-204ENST00000641899 RUSC2Q8N2Y8 1516 aa26.68■■□□□ 1.86
SRRM4-204ENST00000641899 KIAA0586Q9BVV6 1533 aa26.62■■□□□ 1.85
SRRM4-204ENST00000641899 DIP2BQ9P265 1576 aa26.59■■□□□ 1.85
SRRM4-204ENST00000641899 KIF27Q86VH2 1401 aa26.56■■□□□ 1.84
SRRM4-204ENST00000641899 ADCY10Q96PN6 1610 aa26.55■■□□□ 1.84
SRRM4-204ENST00000641899 KDM6BO15054 1643 aa26.54■■□□□ 1.84
SRRM4-204ENST00000641899 IGF1RP08069 1367 aa26.52■■□□□ 1.84
SRRM4-204ENST00000641899 PTPRGP23470 1445 aa26.5■■□□□ 1.83
SRRM4-204ENST00000641899 CARMIL2Q6F5E8 1435 aa26.48■■□□□ 1.83
SRRM4-204ENST00000641899 CUL7Q14999 1698 aa26.47■■□□□ 1.83
SRRM4-204ENST00000641899 KDM4FA0A1W2PPD8 638 aa26.46■■□□□ 1.83
SRRM4-204ENST00000641899 TNIKQ9UKE5 1360 aa26.42■■□□□ 1.82
SRRM4-204ENST00000641899 TTBK1Q5TCY1 1321 aaPredicted RBP26.4■■□□□ 1.82
SRRM4-204ENST00000641899 PLB1Q6P1J6 1458 aa26.38■■□□□ 1.81
SRRM4-204ENST00000641899 CARMIL1Q5VZK9 1371 aa26.38■■□□□ 1.81
SRRM4-204ENST00000641899 ABCC2Q92887 1545 aa26.37■■□□□ 1.81
SRRM4-204ENST00000641899 TSPOAP1O95153 1857 aa26.32■■□□□ 1.8
SRRM4-204ENST00000641899 ASXL2Q76L83 1435 aa26.31■■□□□ 1.8
SRRM4-204ENST00000641899 UHRF1BP1LA0JNW5 1464 aa26.27■■□□□ 1.8
SRRM4-204ENST00000641899 GLI2P10070 1586 aa26.27■■□□□ 1.8
SRRM4-204ENST00000641899 UACAQ9BZF9 1416 aa26.26■■□□□ 1.79
SRRM4-204ENST00000641899 IQGAP2Q13576 1575 aa26.24■■□□□ 1.79
SRRM4-204ENST00000641899 TEX14Q8IWB6 1497 aa26.21■■□□□ 1.79
SRRM4-204ENST00000641899 ADGRL1O94910 1474 aa26.17■■□□□ 1.78
SRRM4-204ENST00000641899 ILDR1Q86SU0 546 aaPredicted RBP26.16■■□□□ 1.78
SRRM4-204ENST00000641899 EPRSP07814 1512 aaKnown RBP26.13■■□□□ 1.77
SRRM4-204ENST00000641899 KDM5BQ9UGL1 1544 aa26.13■■□□□ 1.77
SRRM4-204ENST00000641899 DISP1Q96F81 1524 aa26.11■■□□□ 1.77
SRRM4-204ENST00000641899 RAPGEF2Q9Y4G8 1499 aa26.08■■□□□ 1.77
SRRM4-204ENST00000641899 PPRC1Q5VV67 1664 aaKnown RBP26.07■■□□□ 1.76
SRRM4-204ENST00000641899 UGGT2Q9NYU1 1516 aa26.06■■□□□ 1.76
SRRM4-204ENST00000641899 MAP3K4Q9Y6R4 1608 aa26.03■■□□□ 1.76
SRRM4-204ENST00000641899 COL17A1Q9UMD9 1497 aaPredicted RBP26.03■■□□□ 1.76
SRRM4-204ENST00000641899 FAM9AQ8IZU1 332 aaPredicted RBP26.01■■□□□ 1.75
SRRM4-204ENST00000641899 WDR7Q9Y4E6 1490 aa26■■□□□ 1.75
SRRM4-204ENST00000641899 ZCCHC11Q5TAX3 1644 aaKnown RBP25.98■■□□□ 1.75
SRRM4-204ENST00000641899 KIAA0556O60303 1618 aa25.97■■□□□ 1.75
SRRM4-204ENST00000641899 GOLGA3Q08378 1498 aa25.94■■□□□ 1.74
SRRM4-204ENST00000641899 CD109Q6YHK3 1445 aa25.93■■□□□ 1.74
SRRM4-204ENST00000641899 HECW2Q9P2P5 1572 aa25.9■■□□□ 1.74
SRRM4-204ENST00000641899 KCNH8Q96L42 1107 aa25.9■■□□□ 1.74
SRRM4-204ENST00000641899 MAGI3Q5TCQ9 1506 aa25.89■■□□□ 1.74
SRRM4-204ENST00000641899 CFAP43Q8NDM7 1665 aa25.8■■□□□ 1.72
SRRM4-204ENST00000641899 ABCA8O94911 1581 aa25.76■■□□□ 1.71
SRRM4-204ENST00000641899 PHLDB1Q86UU1 1377 aa25.75■■□□□ 1.71
SRRM4-204ENST00000641899 CTTNBP2Q8WZ74 1663 aa25.72■■□□□ 1.71
SRRM4-204ENST00000641899 ARAP3Q8WWN8 1544 aa25.7■■□□□ 1.7
SRRM4-204ENST00000641899 FBXO41Q8TF61 875 aa25.64■■□□□ 1.7
SRRM4-204ENST00000641899 PRXQ9BXM0 1461 aa25.64■■□□□ 1.69
SRRM4-204ENST00000641899 ARID3CA6NKF2 412 aa25.61■■□□□ 1.69
SRRM4-204ENST00000641899 KIF21BO75037 1637 aa25.59■■□□□ 1.69
SRRM4-204ENST00000641899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.59■■□□□ 1.69
SRRM4-204ENST00000641899 HNRNPUL2Q1KMD3 747 aaKnown RBP25.59■■□□□ 1.69
SRRM4-204ENST00000641899 ATP10BO94823 1461 aa25.59■■□□□ 1.69
SRRM4-204ENST00000641899 P3H3Q8IVL6 736 aa25.58■■□□□ 1.69
SRRM4-204ENST00000641899 ARID4BQ4LE39 1312 aaPredicted RBP25.56■■□□□ 1.68
SRRM4-204ENST00000641899 NEO1Q92859 1461 aa25.55■■□□□ 1.68
SRRM4-204ENST00000641899 PTPRMP28827 1452 aa25.54■■□□□ 1.68
SRRM4-204ENST00000641899 RAPGEF3O95398 923 aa25.53■■□□□ 1.68
SRRM4-204ENST00000641899 ABCA9Q8IUA7 1624 aa25.52■■□□□ 1.68
SRRM4-204ENST00000641899 ADAMTSL3P82987 1691 aa25.44■■□□□ 1.66
SRRM4-204ENST00000641899 PLEKHD1A6NEE1 506 aa25.43■■□□□ 1.66
SRRM4-204ENST00000641899 CSRNP3Q8WYN3 585 aa25.43■■□□□ 1.66
SRRM4-204ENST00000641899 RAPGEF6Q8TEU7 1601 aa25.41■■□□□ 1.66
SRRM4-204ENST00000641899 POGZQ7Z3K3 1410 aa25.39■■□□□ 1.66
SRRM4-204ENST00000641899 DENND4BO75064 1496 aaPredicted RBP25.38■■□□□ 1.65
SRRM4-204ENST00000641899 PCF11O94913 1555 aaKnown RBP25.38■■□□□ 1.65
SRRM4-204ENST00000641899 SAMD9Q5K651 1589 aa25.37■■□□□ 1.65
SRRM4-204ENST00000641899 BCORL1Q5H9F3 1711 aa25.35■■□□□ 1.65
SRRM4-204ENST00000641899 AKNAQ7Z591 1439 aa25.32■■□□□ 1.64
SRRM4-204ENST00000641899 NUP153P49790 1475 aaKnown RBP25.32■■□□□ 1.64
SRRM4-204ENST00000641899 MADDQ8WXG6 1647 aa25.31■■□□□ 1.64
SRRM4-204ENST00000641899 LMTK3Q96Q04 1460 aa25.31■■□□□ 1.64
SRRM4-204ENST00000641899 FANCAO15360 1455 aa25.3■■□□□ 1.64
SRRM4-204ENST00000641899 RANGAP1P46060 587 aaPredicted RBP25.3■■□□□ 1.64
SRRM4-204ENST00000641899 ARHGEF40Q8TER5 1519 aa25.3■■□□□ 1.64
SRRM4-204ENST00000641899 FRMPD1Q5SYB0 1578 aa25.3■■□□□ 1.64
SRRM4-204ENST00000641899 FHOD3Q2V2M9 1422 aa25.29■■□□□ 1.64
SRRM4-204ENST00000641899 CFAP74Q9C0B2 1584 aa25.29■■□□□ 1.64
SRRM4-204ENST00000641899 EEA1Q15075 1411 aa25.28■■□□□ 1.64
SRRM4-204ENST00000641899 MAGI2Q86UL8 1455 aa25.24■■□□□ 1.63
SRRM4-204ENST00000641899 PLPPR3Q6T4P5 718 aa25.23■■□□□ 1.63
SRRM4-204ENST00000641899 EFCAB5A4FU69 1503 aa25.22■■□□□ 1.63
SRRM4-204ENST00000641899 HSPA2P54652 639 aa25.2■■□□□ 1.62
SRRM4-204ENST00000641899 ZFYVE16Q7Z3T8 1539 aa25.2■■□□□ 1.62
SRRM4-204ENST00000641899 RIMS1Q86UR5 1692 aaKnown RBP25.2■■□□□ 1.62
SRRM4-204ENST00000641899 ZMYM4Q5VZL5 1548 aa25.18■■□□□ 1.62
SRRM4-204ENST00000641899 RICTORQ6R327 1708 aa25.17■■□□□ 1.62
SRRM4-204ENST00000641899 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.17■■□□□ 1.62
SRRM4-204ENST00000641899 MLECQ14165 292 aa25.15■■□□□ 1.62
SRRM4-204ENST00000641899 CERKQ8TCT0 537 aa25.15■■□□□ 1.62
SRRM4-204ENST00000641899 CDK11AQ9UQ88 783 aaPredicted RBP25.13■■□□□ 1.61
SRRM4-204ENST00000641899 SCAPERQ9BY12 1400 aa25.12■■□□□ 1.61
SRRM4-204ENST00000641899 YEATS2Q9ULM3 1422 aa25.12■■□□□ 1.61
SRRM4-204ENST00000641899 EFCAB2Q5VUJ9 269 aa25.1■■□□□ 1.61
SRRM4-204ENST00000641899 DMRT2Q9Y5R5 561 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms