RNA–Protein interactions for RNA: ENST00000641549.1

PTPRVP-205, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

BASIC

Gene PTPRVP, Length 5,067 nt, Biotype transcribed unitary pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-205ENST00000641549 KCNH8Q96L42 1107 aa18.14■□□□□ 0.49
PTPRVP-205ENST00000641549 ANP32AP39687 249 aaKnown RBP18.12■□□□□ 0.49
PTPRVP-205ENST00000641549 CARMIL1Q5VZK9 1371 aa18.11■□□□□ 0.49
PTPRVP-205ENST00000641549 MROH2BQ7Z745 1585 aa18.11■□□□□ 0.49
PTPRVP-205ENST00000641549 WDR43Q15061 677 aaKnown RBP eCLIP18.09■□□□□ 0.49
PTPRVP-205ENST00000641549 CUX2O14529 1486 aa18.09■□□□□ 0.49
PTPRVP-205ENST00000641549 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.08■□□□□ 0.49
PTPRVP-205ENST00000641549 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
PTPRVP-205ENST00000641549 MRS2Q9HD23 443 aa18.07■□□□□ 0.48
PTPRVP-205ENST00000641549 FKBP8Q14318 412 aa18.07■□□□□ 0.48
PTPRVP-205ENST00000641549 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
PTPRVP-205ENST00000641549 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
PTPRVP-205ENST00000641549 CDCA8Q53HL2 280 aa18.01■□□□□ 0.47
PTPRVP-205ENST00000641549 BCL11AQ9H165 835 aa18.01■□□□□ 0.47
PTPRVP-205ENST00000641549 SOGA1O94964 1423 aa18■□□□□ 0.47
PTPRVP-205ENST00000641549 CCNB3Q8WWL7 1395 aa17.99■□□□□ 0.47
PTPRVP-205ENST00000641549 UPF2Q9HAU5 1272 aaKnown RBP17.98■□□□□ 0.47
PTPRVP-205ENST00000641549 PPP1R15AO75807 674 aaPredicted RBP17.98■□□□□ 0.47
PTPRVP-205ENST00000641549 TOP2AP11388 1531 aaKnown RBP17.97■□□□□ 0.47
PTPRVP-205ENST00000641549 SALL2Q9Y467 1007 aaPredicted RBP17.94■□□□□ 0.46
PTPRVP-205ENST00000641549 MIER1Q8N108 512 aa17.94■□□□□ 0.46
PTPRVP-205ENST00000641549 EIF4G1Q04637 1599 aaKnown RBP17.93■□□□□ 0.46
PTPRVP-205ENST00000641549 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
PTPRVP-205ENST00000641549 CCDC136Q96JN2 1154 aa17.92■□□□□ 0.46
PTPRVP-205ENST00000641549 RGL3Q3MIN7 710 aa17.92■□□□□ 0.46
PTPRVP-205ENST00000641549 TIMELESSQ9UNS1 1208 aa17.91■□□□□ 0.46
PTPRVP-205ENST00000641549 HIRIP3Q9BW71 556 aaPredicted RBP17.89■□□□□ 0.45
PTPRVP-205ENST00000641549 NPM2Q86SE8 214 aaKnown RBP17.89■□□□□ 0.45
PTPRVP-205ENST00000641549 CARMIL2Q6F5E8 1435 aa17.88■□□□□ 0.45
PTPRVP-205ENST00000641549 CARD11Q9BXL7 1154 aa17.88■□□□□ 0.45
PTPRVP-205ENST00000641549 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
PTPRVP-205ENST00000641549 CFAP53Q96M91 514 aa17.86■□□□□ 0.45
PTPRVP-205ENST00000641549 KNSTRNQ9Y448 316 aa17.85■□□□□ 0.45
PTPRVP-205ENST00000641549 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
PTPRVP-205ENST00000641549 FMN1Q68DA7 1419 aa17.84■□□□□ 0.45
PTPRVP-205ENST00000641549 HSP90AA1P07900 732 aaKnown RBP17.83■□□□□ 0.45
PTPRVP-205ENST00000641549 ARHGAP35Q9NRY4 1499 aa17.83■□□□□ 0.45
PTPRVP-205ENST00000641549 ARID4BQ4LE39 1312 aaPredicted RBP17.82■□□□□ 0.44
PTPRVP-205ENST00000641549 KANK1Q14678 1352 aa17.82■□□□□ 0.44
PTPRVP-205ENST00000641549 WIZO95785 1651 aa17.81■□□□□ 0.44
PTPRVP-205ENST00000641549 ATAD2BQ9ULI0 1458 aa17.79■□□□□ 0.44
PTPRVP-205ENST00000641549 MYH16Q9H6N6 1097 aa17.78■□□□□ 0.44
PTPRVP-205ENST00000641549 SETD5Q9C0A6 1442 aa17.78■□□□□ 0.44
PTPRVP-205ENST00000641549 SIN3AQ96ST3 1273 aa17.76■□□□□ 0.43
PTPRVP-205ENST00000641549 TDRD9Q8NDG6 1382 aaKnown RBP17.76■□□□□ 0.43
PTPRVP-205ENST00000641549 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
PTPRVP-205ENST00000641549 C14orf37Q86TY3 774 aa17.74■□□□□ 0.43
PTPRVP-205ENST00000641549 ANP32BQ92688 251 aaKnown RBP17.73■□□□□ 0.43
PTPRVP-205ENST00000641549 RAPGEF2Q9Y4G8 1499 aa17.73■□□□□ 0.43
PTPRVP-205ENST00000641549 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
PTPRVP-205ENST00000641549 POGKQ9P215 609 aa17.7■□□□□ 0.42
PTPRVP-205ENST00000641549 HDGFP51858 240 aaKnown RBP17.7■□□□□ 0.42
PTPRVP-205ENST00000641549 NUDCQ9Y266 331 aa17.69■□□□□ 0.42
PTPRVP-205ENST00000641549 TMF1P82094 1093 aa17.68■□□□□ 0.42
PTPRVP-205ENST00000641549 KANK4Q5T7N3 995 aaPredicted RBP17.66■□□□□ 0.42
PTPRVP-205ENST00000641549 DCAF11Q8TEB1 546 aa17.66■□□□□ 0.42
PTPRVP-205ENST00000641549 EFCAB2Q5VUJ9 269 aa17.66■□□□□ 0.42
PTPRVP-205ENST00000641549 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
PTPRVP-205ENST00000641549 MAPK8IP3Q9UPT6 1336 aa17.63■□□□□ 0.41
PTPRVP-205ENST00000641549 ANKRD30AQ9BXX3 1397 aa17.63■□□□□ 0.41
PTPRVP-205ENST00000641549 ZBTB7CA1YPR0 619 aa17.62■□□□□ 0.41
PTPRVP-205ENST00000641549 RSPH4AQ5TD94 716 aa17.61■□□□□ 0.41
PTPRVP-205ENST00000641549 PNNQ9H307 717 aaKnown RBP17.61■□□□□ 0.41
PTPRVP-205ENST00000641549 IRX6P78412 446 aaPredicted RBP17.61■□□□□ 0.41
PTPRVP-205ENST00000641549 EIF5BO60841 1220 aaKnown RBP17.6■□□□□ 0.41
PTPRVP-205ENST00000641549 PKD2Q13563 968 aa17.6■□□□□ 0.41
PTPRVP-205ENST00000641549 CCDC18Q5T9S5 1454 aa17.58■□□□□ 0.4
PTPRVP-205ENST00000641549 PPM1GO15355 546 aaPredicted RBP17.57■□□□□ 0.4
PTPRVP-205ENST00000641549 FANCD2Q9BXW9 1451 aa17.57■□□□□ 0.4
PTPRVP-205ENST00000641549 HAP1P54257 671 aaPredicted RBP17.56■□□□□ 0.4
PTPRVP-205ENST00000641549 CCER2I3L3R5 266 aa17.56■□□□□ 0.4
PTPRVP-205ENST00000641549 DDRGK1Q96HY6 314 aa17.56■□□□□ 0.4
PTPRVP-205ENST00000641549 CHMP4BQ9H444 224 aaKnown RBP17.56■□□□□ 0.4
PTPRVP-205ENST00000641549 RAB3GAP2Q9H2M9 1393 aa17.56■□□□□ 0.4
PTPRVP-205ENST00000641549 MS4A1P11836 297 aa17.54■□□□□ 0.4
PTPRVP-205ENST00000641549 MPHOSPH9Q99550 1183 aa17.54■□□□□ 0.4
PTPRVP-205ENST00000641549 BECN1Q14457 450 aa17.54■□□□□ 0.4
PTPRVP-205ENST00000641549 FTSJ3Q8IY81 847 aaKnown RBP17.53■□□□□ 0.4
PTPRVP-205ENST00000641549 FHOD3Q2V2M9 1422 aa17.53■□□□□ 0.4
PTPRVP-205ENST00000641549 NUP155O75694 1391 aa17.53■□□□□ 0.4
PTPRVP-205ENST00000641549 GGT6Q6P531 493 aa17.51■□□□□ 0.39
PTPRVP-205ENST00000641549 SUPT16HQ9Y5B9 1047 aaKnown RBP17.51■□□□□ 0.39
PTPRVP-205ENST00000641549 CC2D1BQ5T0F9 858 aaKnown RBP17.51■□□□□ 0.39
PTPRVP-205ENST00000641549 JPH4Q96JJ6 628 aa17.51■□□□□ 0.39
PTPRVP-205ENST00000641549 HSPA5P11021 654 aaKnown RBP17.5■□□□□ 0.39
PTPRVP-205ENST00000641549 A0A0G2JS52 829 aa17.5■□□□□ 0.39
PTPRVP-205ENST00000641549 PPP4R2Q9NY27 417 aa17.48■□□□□ 0.39
PTPRVP-205ENST00000641549 PLEKHG5O94827 1062 aa17.48■□□□□ 0.39
PTPRVP-205ENST00000641549 NEUROD2Q15784 382 aa17.48■□□□□ 0.39
PTPRVP-205ENST00000641549 SRPK2P78362 688 aaKnown RBP17.47■□□□□ 0.39
PTPRVP-205ENST00000641549 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
PTPRVP-205ENST00000641549 MLECQ14165 292 aa17.45■□□□□ 0.38
PTPRVP-205ENST00000641549 CASC1Q6TDU7 716 aa17.45■□□□□ 0.38
PTPRVP-205ENST00000641549 U2SURPO15042 1029 aaKnown RBP17.45■□□□□ 0.38
PTPRVP-205ENST00000641549 MORC1Q86VD1 984 aa17.44■□□□□ 0.38
PTPRVP-205ENST00000641549 KTN1Q86UP2 1357 aaKnown RBP17.44■□□□□ 0.38
PTPRVP-205ENST00000641549 TNNT2P45379 298 aaPredicted RBP17.43■□□□□ 0.38
PTPRVP-205ENST00000641549 ANP32EQ9BTT0 268 aa17.43■□□□□ 0.38
PTPRVP-205ENST00000641549 ROCK2O75116 1388 aaKnown RBP17.43■□□□□ 0.38
PTPRVP-205ENST00000641549 LAS1LQ9Y4W2 734 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 589.8 ms