RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 EIF4G2P78344 907 aaKnown RBP eCLIP26.04■■□□□ 1.76
KCNMA1-293ENST00000640969 MTUS2Q5JR59 1369 aa26.03■■□□□ 1.76
KCNMA1-293ENST00000640969 SCRIBQ14160 1630 aa26.01■■□□□ 1.75
KCNMA1-293ENST00000640969 GOLGA6L22H0YM25 854 aa25.97■■□□□ 1.75
KCNMA1-293ENST00000640969 ZBTB7CA1YPR0 619 aa25.97■■□□□ 1.75
KCNMA1-293ENST00000640969 A0A0G2JS52 829 aa25.96■■□□□ 1.75
KCNMA1-293ENST00000640969 ANP32EQ9BTT0 268 aa25.95■■□□□ 1.75
KCNMA1-293ENST00000640969 RRP7BPQ9NSQ0 103 aa25.92■■□□□ 1.74
KCNMA1-293ENST00000640969 SENP3Q9H4L4 574 aaPredicted RBP25.91■■□□□ 1.74
KCNMA1-293ENST00000640969 PLEKHG5O94827 1062 aa25.87■■□□□ 1.73
KCNMA1-293ENST00000640969 C14orf37Q86TY3 774 aa25.87■■□□□ 1.73
KCNMA1-293ENST00000640969 PTMAP06454 111 aaKnown RBP25.85■■□□□ 1.73
KCNMA1-293ENST00000640969 CLIP1P30622 1438 aa25.85■■□□□ 1.73
KCNMA1-293ENST00000640969 SENP3-EIF4A1A0A087X0R7 540 aa25.84■■□□□ 1.73
KCNMA1-293ENST00000640969 PPP1R15AO75807 674 aaPredicted RBP25.8■■□□□ 1.72
KCNMA1-293ENST00000640969 CASC1Q6TDU7 716 aa25.79■■□□□ 1.72
KCNMA1-293ENST00000640969 ZRSR1Q15695 479 aaKnown RBP25.79■■□□□ 1.72
KCNMA1-293ENST00000640969 CFAP53Q96M91 514 aa25.79■■□□□ 1.72
KCNMA1-293ENST00000640969 TPRNQ4KMQ1 711 aa25.78■■□□□ 1.72
KCNMA1-293ENST00000640969 SUPT16HQ9Y5B9 1047 aaKnown RBP25.77■■□□□ 1.72
KCNMA1-293ENST00000640969 TNNT2P45379 298 aaPredicted RBP25.75■■□□□ 1.71
KCNMA1-293ENST00000640969 DNTTIP2Q5QJE6 756 aaKnown RBP25.75■■□□□ 1.71
KCNMA1-293ENST00000640969 FTSJ3Q8IY81 847 aaKnown RBP25.75■■□□□ 1.71
KCNMA1-293ENST00000640969 PPM1GO15355 546 aaPredicted RBP25.75■■□□□ 1.71
KCNMA1-293ENST00000640969 RGL3Q3MIN7 710 aa25.75■■□□□ 1.71
KCNMA1-293ENST00000640969 CHMP7Q8WUX9 453 aaPredicted RBP25.74■■□□□ 1.71
KCNMA1-293ENST00000640969 KNSTRNQ9Y448 316 aa25.73■■□□□ 1.71
KCNMA1-293ENST00000640969 LAS1LQ9Y4W2 734 aaKnown RBP25.69■■□□□ 1.7
KCNMA1-293ENST00000640969 RSF1Q96T23 1441 aaPredicted RBP25.67■■□□□ 1.7
KCNMA1-293ENST00000640969 CDCA8Q53HL2 280 aa25.67■■□□□ 1.7
KCNMA1-293ENST00000640969 ERICH6BQ5W0A0 696 aa25.65■■□□□ 1.7
KCNMA1-293ENST00000640969 KCNH8Q96L42 1107 aa25.65■■□□□ 1.7
KCNMA1-293ENST00000640969 NAP1L5Q96NT1 182 aaPredicted RBP25.65■■□□□ 1.7
KCNMA1-293ENST00000640969 NEUROD2Q15784 382 aa25.63■■□□□ 1.69
KCNMA1-293ENST00000640969 CARD11Q9BXL7 1154 aa25.62■■□□□ 1.69
KCNMA1-293ENST00000640969 ZCCHC6Q5VYS8 1495 aaKnown RBP25.62■■□□□ 1.69
KCNMA1-293ENST00000640969 RGS3P49796 1198 aa25.61■■□□□ 1.69
KCNMA1-293ENST00000640969 PPP4R2Q9NY27 417 aa25.61■■□□□ 1.69
KCNMA1-293ENST00000640969 RTN4Q9NQC3 1192 aaKnown RBP25.6■■□□□ 1.69
KCNMA1-293ENST00000640969 MAPK8IP3Q9UPT6 1336 aa25.6■■□□□ 1.69
KCNMA1-293ENST00000640969 GOLGA3Q08378 1498 aa25.58■■□□□ 1.69
KCNMA1-293ENST00000640969 NOP58Q9Y2X3 529 aaKnown RBP25.58■■□□□ 1.69
KCNMA1-293ENST00000640969 CEP162Q5TB80 1403 aa25.58■■□□□ 1.69
KCNMA1-293ENST00000640969 PLEKHD1A6NEE1 506 aa25.58■■□□□ 1.69
KCNMA1-293ENST00000640969 PLCB2Q00722 1185 aa25.56■■□□□ 1.68
KCNMA1-293ENST00000640969 FRAT1Q92837 279 aaPredicted RBP25.56■■□□□ 1.68
KCNMA1-293ENST00000640969 TULP1O00294 542 aaPredicted RBP25.54■■□□□ 1.68
KCNMA1-293ENST00000640969 HAP1P54257 671 aaPredicted RBP25.54■■□□□ 1.68
KCNMA1-293ENST00000640969 HSP90AB1P08238 724 aaKnown RBP25.53■■□□□ 1.68
KCNMA1-293ENST00000640969 NUDCQ9Y266 331 aa25.51■■□□□ 1.67
KCNMA1-293ENST00000640969 TAOK2Q9UL54 1235 aa25.5■■□□□ 1.67
KCNMA1-293ENST00000640969 CFDP1Q9UEE9 299 aaPredicted RBP25.47■■□□□ 1.67
KCNMA1-293ENST00000640969 GOLGA6L6A8MZA4 724 aa25.46■■□□□ 1.67
KCNMA1-293ENST00000640969 CC2D1BQ5T0F9 858 aaKnown RBP25.45■■□□□ 1.66
KCNMA1-293ENST00000640969 EEA1Q15075 1411 aa25.43■■□□□ 1.66
KCNMA1-293ENST00000640969 MYO15BQ96JP2 1530 aa25.43■■□□□ 1.66
KCNMA1-293ENST00000640969 CHMP4BQ9H444 224 aaKnown RBP25.43■■□□□ 1.66
KCNMA1-293ENST00000640969 OS9Q13438 667 aaPredicted RBP25.43■■□□□ 1.66
KCNMA1-293ENST00000640969 SIN3AQ96ST3 1273 aa25.41■■□□□ 1.66
KCNMA1-293ENST00000640969 B4GALNT3Q6L9W6 998 aa25.41■■□□□ 1.66
KCNMA1-293ENST00000640969 FGD1P98174 961 aa25.4■■□□□ 1.66
KCNMA1-293ENST00000640969 MS4A1P11836 297 aa25.4■■□□□ 1.66
KCNMA1-293ENST00000640969 POGKQ9P215 609 aa25.39■■□□□ 1.66
KCNMA1-293ENST00000640969 ARID4BQ4LE39 1312 aaPredicted RBP25.39■■□□□ 1.66
KCNMA1-293ENST00000640969 CCDC180Q9P1Z9 1646 aa25.38■■□□□ 1.65
KCNMA1-293ENST00000640969 U2SURPO15042 1029 aaKnown RBP25.37■■□□□ 1.65
KCNMA1-293ENST00000640969 KCNJ4P48050 445 aa25.37■■□□□ 1.65
KCNMA1-293ENST00000640969 NAP1L2Q9ULW6 460 aaPredicted RBP25.36■■□□□ 1.65
KCNMA1-293ENST00000640969 HSCBQ8IWL3 235 aa25.35■■□□□ 1.65
KCNMA1-293ENST00000640969 LMOD2Q6P5Q4 547 aa25.32■■□□□ 1.64
KCNMA1-293ENST00000640969 NRDCO43847 1150 aa25.32■■□□□ 1.64
KCNMA1-293ENST00000640969 GOLGA6L4A6NEF3 574 aa25.29■■□□□ 1.64
KCNMA1-293ENST00000640969 PNNQ9H307 717 aaKnown RBP25.29■■□□□ 1.64
KCNMA1-293ENST00000640969 NPHP1O15259 732 aa25.27■■□□□ 1.64
KCNMA1-293ENST00000640969 CHAF1AQ13111 956 aaPredicted RBP25.27■■□□□ 1.64
KCNMA1-293ENST00000640969 SPRYD3Q8NCJ5 442 aa25.26■■□□□ 1.63
KCNMA1-293ENST00000640969 L1TD1Q5T7N2 865 aaKnown RBP25.25■■□□□ 1.63
KCNMA1-293ENST00000640969 TNIKQ9UKE5 1360 aa25.25■■□□□ 1.63
KCNMA1-293ENST00000640969 MSNP26038 577 aaKnown RBP25.25■■□□□ 1.63
KCNMA1-293ENST00000640969 TMF1P82094 1093 aa25.24■■□□□ 1.63
KCNMA1-293ENST00000640969 WRNQ14191 1432 aaPredicted RBP eCLIP25.24■■□□□ 1.63
KCNMA1-293ENST00000640969 CEP164Q9UPV0 1460 aa25.22■■□□□ 1.63
KCNMA1-293ENST00000640969 MCCP23508 829 aa25.21■■□□□ 1.63
KCNMA1-293ENST00000640969 DEKP35659 375 aaKnown RBP25.21■■□□□ 1.63
KCNMA1-293ENST00000640969 KIF27Q86VH2 1401 aa25.21■■□□□ 1.63
KCNMA1-293ENST00000640969 GOLGA2Q08379 1002 aa25.2■■□□□ 1.62
KCNMA1-293ENST00000640969 DRC7Q8IY82 874 aa25.18■■□□□ 1.62
KCNMA1-293ENST00000640969 DCAF11Q8TEB1 546 aa25.17■■□□□ 1.62
KCNMA1-293ENST00000640969 CCNB3Q8WWL7 1395 aa25.12■■□□□ 1.61
KCNMA1-293ENST00000640969 MORC1Q86VD1 984 aa25.11■■□□□ 1.61
KCNMA1-293ENST00000640969 RBM19Q9Y4C8 960 aaKnown RBP25.1■■□□□ 1.61
KCNMA1-293ENST00000640969 CCER2I3L3R5 266 aa25.1■■□□□ 1.61
KCNMA1-293ENST00000640969 SOX12O15370 315 aa25.08■■□□□ 1.61
KCNMA1-293ENST00000640969 CFAP44Q96MT7 982 aa25.08■■□□□ 1.61
KCNMA1-293ENST00000640969 SRPK2P78362 688 aaKnown RBP25.07■■□□□ 1.6
KCNMA1-293ENST00000640969 KANK1Q14678 1352 aa25.04■■□□□ 1.6
KCNMA1-293ENST00000640969 CLSTN1O94985 981 aa25.04■■□□□ 1.6
KCNMA1-293ENST00000640969 HSPA5P11021 654 aaKnown RBP25.04■■□□□ 1.6
KCNMA1-293ENST00000640969 APBB1O00213 710 aa25.03■■□□□ 1.6
KCNMA1-293ENST00000640969 GNL2Q13823 731 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms